Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078377
CDS Infomation

pacid=37442395 polypeptide=PGSC0003DMP400053095 locus=PGSC0003DMG400030516 ID=PGSC0003DMT400078377.v4.03 annot-version=v4.03
Sequence

ATGTTTGCTGCCCAAAATGATTGTGCAGGATCTAACAACAAAAACCAGAAATTATCAATC
CCGCAGTTGGTGGGCACTGTCTGGGAAGCTTGTTCTGCTCTTAAAAAGACTCCAGCCACA
AATATTACTGCTATAGGTCGAGCAATGACACAACTTGCTGTTTCCATGAAGGATGTACTT
CGTGAAATGAATGAACTGAAGCCAGCGTCATCTGATGTCGGAGATGAATCTTCTGTTCAA
GATTCTGCCGAAGGAGATCAGGATAGTAATGATTCATTTGCAGGTGATCTAGGCAATGAT
CTTTCTCCGGAGGAAATGGAAATTGCTCGTTTGACTACTGATGTGGTATCTGCAACACTT
GTGGTCATTAAAGAACTTATTCGCTCCATTACAAGCTTGCTTAAGCAGGAAAGTACTGCG
GATACTGCTACTTTTGTACCCTCTCTAGAGACACTACTGAAACTTTCTCAAGAAATCGGA
CTTCAAATTGACGAACTTGGAGCTTCTCTGTATCCTCCACAAGAAATTTCTTCATTGAAG
ACTGCTATAGAGAAGATATCATGTGCTACTGATGAAATATTGGTGGAGCTGGAAAAACTT
AAAGGGTGTTCTGAAGATTTTGTTAAAGCATGCCATGGTTTGCGGAGTTCATTGAAACAA
CTGGAAGCAGAATTAGATCACTCAGATGCAACTGATACTATGCCCAAGATAGAAAACCTC
GCGATCGCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053095
PEP Infomation

pacid=37442395 transcript=PGSC0003DMT400078377 locus=PGSC0003DMG400030516 ID=PGSC0003DMT400078377.v4.03 annot-version=v4.03
Sequence

MFAAQNDCAGSNNKNQKLSIPQLVGTVWEACSALKKTPATNITAIGRAMTQLAVSMKDVL
REMNELKPASSDVGDESSVQDSAEGDQDSNDSFAGDLGNDLSPEEMEIARLTTDVVSATL
VVIKELIRSITSLLKQESTADTATFVPSLETLLKLSQEIGLQIDELGASLYPPQEISSLK
TAIEKISCATDEILVELEKLKGCSEDFVKACHGLRSSLKQLEAELDHSDATDTMPKIENL
AIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400078377
Transcript Infomation

pacid=37442395 locus=PGSC0003DMG400030516 ID=PGSC0003DMT400078377.v4.03 annot-version=v4.03
Sequence

ATGTTTGCTGCCCAAAATGATTGTGCAGGATCTAACAACAAAAACCAGAAATTATCAATC
CCGCAGTTGGTGGGCACTGTCTGGGAAGCTTGTTCTGCTCTTAAAAAGACTCCAGCCACA
AATATTACTGCTATAGGTCGAGCAATGACACAACTTGCTGTTTCCATGAAGGATGTACTT
CGTGAAATGAATGAACTGAAGCCAGCGTCATCTGATGTCGGAGATGAATCTTCTGTTCAA
GATTCTGCCGAAGGAGATCAGGATAGTAATGATTCATTTGCAGGTGATCTAGGCAATGAT
CTTTCTCCGGAGGAAATGGAAATTGCTCGTTTGACTACTGATGTGGTATCTGCAACACTT
GTGGTCATTAAAGAACTTATTCGCTCCATTACAAGCTTGCTTAAGCAGGAAAGTACTGCG
GATACTGCTACTTTTGTACCCTCTCTAGAGACACTACTGAAACTTTCTCAAGAAATCGGA
CTTCAAATTGACGAACTTGGAGCTTCTCTGTATCCTCCACAAGAAATTTCTTCATTGAAG
ACTGCTATAGAGAAGATATCATGTGCTACTGATGAAATATTGGTGGAGCTGGAAAAACTT
AAAGGGTGTTCTGAAGATTTTGTTAAAGCATGCCATGGTTTGCGGAGTTCATTGAAACAA
CTGGAAGCAGAATTAGATCACTCAGATGCAACTGATACTATGCCCAAGATAGAAAACCTC
GCGATCGCGTAA