Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078356
CDS Infomation

pacid=37443762 polypeptide=PGSC0003DMP400053076 locus=PGSC0003DMG400030507 ID=PGSC0003DMT400078356.v4.03 annot-version=v4.03
Sequence

ATGTTGCCGATTACCGGCAAAGGCAGCGGAGTTGGCCAGTTACTGGCGGCTGTAGCGGCG
GCGCTACTGCTCCGACTTTTCTCCTCTCCTGGTCCGGCGATTTTACCGGATAATGAAGAC
GTTCCTGATGATGACGGTGAGAGAGGAAGTGAAAATGACGAAGCTACGGTTACTGGAAAA
GTACTTCCGGTTACTATTAGATGGACTAATATCACTTGCTCGCTTTCTGATAAATCCGCA
AATACGGTGCGGTTTTTGCTAAAAAATGTGACAGGAGAAGCTAAACCTGGTCGGTTGCTA
GCAATAATGGGTCCATCAGGATCAGGAAAGACTACTCTTCTCAATGTTCTGGCAGGTCAA
ACAAAAGCATCACCTAAGTTAAATTTGTCTGGTCTTTTGGACATCAATGGGGTGCCATTT
TCAAACAAAATATACAAGTTTGCCTATGTTAGACAAGAAGATCTTTTCTTTTCCCAGTTG
ACTGTTCGAGAAACTCTCTCTCTTGCAGCTGAACTGCAGCTACAGGACATATCTTCAATA
GAAGAGAGAGATGAATATGTGAACAATCTATTGTTTAAAATAGGTTTGGTCAGTTGTGCT
GATTCACGCATTGGTGATGCAAAAGTTCGTGGAATTAGTGGAGGTGAAAAGAAGCGCCTG
TCACTTGCATGTGAGCTTATTGCCAGTCCATCTGTAGTTTTTGCTGATGAACCTACCACT
GGACTTGATGCTTTTCAAGCAGAGCGAGTGATGGAAACCTTAAGACAACTTGCACAAGAT
GGACATACTGTTATATGTTCTATACACCAGCCTAGAGGGTCTGTGTATGCAAAATTCGAT
GACATTGTTCTGTTGGCAGGGGGCTCGCTCATTTATGCTGGTCCTGCACGTGATGAAGTA
CTAGCATACTTCTCGAAATTCGGGTACATTTGTCCAGATCATGTAAATCCTGCTGAATTT
TTGGCTGATCTAATATCTATAGACTATAGTTCGCGAGAGAGTGTATATTCTTCTCAAAAG
AGAATAAATGGTCTAGTTGAGTCATTCTCAGAAAAGATACCAGAGGTTTTATATGCAACT
TCACTTGTAAGGGATAGTTCGAAGACCCATGTAAACTTCCAAAAGAAATCTATTTCACGT
AAAGGTGGTTGGTGGAGGCAGTTCAGGTTACTTCTCAAACGTGCATGGATGCAAGCTTCT
CGTGATGGACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCTTCAGCTTTGATATTT
GGTTCTATATTCTGGAGGATGGGCAGATCACAAACGTCAATACAAGACAGGATGGGATTA
CTTCAGGTTGCTGCAATAAACACTGCTATGGCTGCTCTCACAAAAACAGTTGGTGTCTTT
CCCAAGGAACGAGCAATTGTTGATAGAGAGCGTGCAAAAGGGTTTTATGCTCTGGGACCA
TATTTGCTTTCCAAATTGATTGCTGAGATTCCTGTTGGAGCAGCATTTCCGTTACTCTTT
GGTGGCATCCTATACCCAATGGCTCGACTTCATCCTACCATTTCTAGATTTGGGAAGTTC
TGTGGAATTGTGACGGTGGAGTCTTTTGCTGCATCTGCTATGGGCTTGACTGTGGGAGCT
ATGGTTCCAACGACTGAAGCTGCATTAGCATTAGGTCCCTCTCTTATGACAGTTTTTATT
GTCTTTGGAGGCTCCTATGTCAATTCAGACAACACACCAATTATTTTTCGGTGGATTCCT
CGAGTTTCGCTTATAAGATGGGCGTTTCAGGGGCTTAGCATCAATGAATTTAGTGGCCTT
CAATTTGAGCATCAAAACACATTTGACGTACAGTCTGGTGAACAGGTACTCGAGCGGCAA
TCATTTGGAGGCAGCCGAATAGGTGATACCATTACTGCTCAAAGTAGAATACTCATGTTT
TGGTATTACACAACGTATCTTCTCCTGGAGAAAAATAAGCCCAAGTATCAACGGCTTGAA
CCTCCACCACGTCTCAAAGATATCGAAGAAGAGCCAGAGGAAGAAGCAAAGCTTCAGCCC
ATAAAGGATGATGATTTGCCTGAACCAACTCAACAAGTTGAATCTCCGCCCTCAGATGAA
GGTAAACCCGACGAGCAGCAGGAATCTTCTCCTGCTGATCCACTTGATCTGTTTACCCTT
GACGGCTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053076
PEP Infomation

pacid=37443762 transcript=PGSC0003DMT400078356 locus=PGSC0003DMG400030507 ID=PGSC0003DMT400078356.v4.03 annot-version=v4.03
Sequence

MLPITGKGSGVGQLLAAVAAALLLRLFSSPGPAILPDNEDVPDDDGERGSENDEATVTGK
VLPVTIRWTNITCSLSDKSANTVRFLLKNVTGEAKPGRLLAIMGPSGSGKTTLLNVLAGQ
TKASPKLNLSGLLDINGVPFSNKIYKFAYVRQEDLFFSQLTVRETLSLAAELQLQDISSI
EERDEYVNNLLFKIGLVSCADSRIGDAKVRGISGGEKKRLSLACELIASPSVVFADEPTT
GLDAFQAERVMETLRQLAQDGHTVICSIHQPRGSVYAKFDDIVLLAGGSLIYAGPARDEV
LAYFSKFGYICPDHVNPAEFLADLISIDYSSRESVYSSQKRINGLVESFSEKIPEVLYAT
SLVRDSSKTHVNFQKKSISRKGGWWRQFRLLLKRAWMQASRDGPTNKVRARMSIASALIF
GSIFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGFYALGP
YLLSKLIAEIPVGAAFPLLFGGILYPMARLHPTISRFGKFCGIVTVESFAASAMGLTVGA
MVPTTEAALALGPSLMTVFIVFGGSYVNSDNTPIIFRWIPRVSLIRWAFQGLSINEFSGL
QFEHQNTFDVQSGEQVLERQSFGGSRIGDTITAQSRILMFWYYTTYLLLEKNKPKYQRLE
PPPRLKDIEEEPEEEAKLQPIKDDDLPEPTQQVESPPSDEGKPDEQQESSPADPLDLFTL
DGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078356
Transcript Infomation

pacid=37443762 locus=PGSC0003DMG400030507 ID=PGSC0003DMT400078356.v4.03 annot-version=v4.03
Sequence

ATGTTGCCGATTACCGGCAAAGGCAGCGGAGTTGGCCAGTTACTGGCGGCTGTAGCGGCG
GCGCTACTGCTCCGACTTTTCTCCTCTCCTGGTCCGGCGATTTTACCGGATAATGAAGAC
GTTCCTGATGATGACGGTGAGAGAGGAAGTGAAAATGACGAAGCTACGGTTACTGGAAAA
GTACTTCCGGTTACTATTAGATGGACTAATATCACTTGCTCGCTTTCTGATAAATCCGCA
AATACGGTGCGGTTTTTGCTAAAAAATGTGACAGGAGAAGCTAAACCTGGTCGGTTGCTA
GCAATAATGGGTCCATCAGGATCAGGAAAGACTACTCTTCTCAATGTTCTGGCAGGTCAA
ACAAAAGCATCACCTAAGTTAAATTTGTCTGGTCTTTTGGACATCAATGGGGTGCCATTT
TCAAACAAAATATACAAGTTTGCCTATGTTAGACAAGAAGATCTTTTCTTTTCCCAGTTG
ACTGTTCGAGAAACTCTCTCTCTTGCAGCTGAACTGCAGCTACAGGACATATCTTCAATA
GAAGAGAGAGATGAATATGTGAACAATCTATTGTTTAAAATAGGTTTGGTCAGTTGTGCT
GATTCACGCATTGGTGATGCAAAAGTTCGTGGAATTAGTGGAGGTGAAAAGAAGCGCCTG
TCACTTGCATGTGAGCTTATTGCCAGTCCATCTGTAGTTTTTGCTGATGAACCTACCACT
GGACTTGATGCTTTTCAAGCAGAGCGAGTGATGGAAACCTTAAGACAACTTGCACAAGAT
GGACATACTGTTATATGTTCTATACACCAGCCTAGAGGGTCTGTGTATGCAAAATTCGAT
GACATTGTTCTGTTGGCAGGGGGCTCGCTCATTTATGCTGGTCCTGCACGTGATGAAGTA
CTAGCATACTTCTCGAAATTCGGGTACATTTGTCCAGATCATGTAAATCCTGCTGAATTT
TTGGCTGATCTAATATCTATAGACTATAGTTCGCGAGAGAGTGTATATTCTTCTCAAAAG
AGAATAAATGGTCTAGTTGAGTCATTCTCAGAAAAGATACCAGAGGTTTTATATGCAACT
TCACTTGTAAGGGATAGTTCGAAGACCCATGTAAACTTCCAAAAGAAATCTATTTCACGT
AAAGGTGGTTGGTGGAGGCAGTTCAGGTTACTTCTCAAACGTGCATGGATGCAAGCTTCT
CGTGATGGACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCTTCAGCTTTGATATTT
GGTTCTATATTCTGGAGGATGGGCAGATCACAAACGTCAATACAAGACAGGATGGGATTA
CTTCAGGTTGCTGCAATAAACACTGCTATGGCTGCTCTCACAAAAACAGTTGGTGTCTTT
CCCAAGGAACGAGCAATTGTTGATAGAGAGCGTGCAAAAGGGTTTTATGCTCTGGGACCA
TATTTGCTTTCCAAATTGATTGCTGAGATTCCTGTTGGAGCAGCATTTCCGTTACTCTTT
GGTGGCATCCTATACCCAATGGCTCGACTTCATCCTACCATTTCTAGATTTGGGAAGTTC
TGTGGAATTGTGACGGTGGAGTCTTTTGCTGCATCTGCTATGGGCTTGACTGTGGGAGCT
ATGGTTCCAACGACTGAAGCTGCATTAGCATTAGGTCCCTCTCTTATGACAGTTTTTATT
GTCTTTGGAGGCTCCTATGTCAATTCAGACAACACACCAATTATTTTTCGGTGGATTCCT
CGAGTTTCGCTTATAAGATGGGCGTTTCAGGGGCTTAGCATCAATGAATTTAGTGGCCTT
CAATTTGAGCATCAAAACACATTTGACGTACAGTCTGGTGAACAGGTACTCGAGCGGCAA
TCATTTGGAGGCAGCCGAATAGGTGATACCATTACTGCTCAAAGTAGAATACTCATGTTT
TGGTATTACACAACGTATCTTCTCCTGGAGAAAAATAAGCCCAAGTATCAACGGCTTGAA
CCTCCACCACGTCTCAAAGATATCGAAGAAGAGCCAGAGGAAGAAGCAAAGCTTCAGCCC
ATAAAGGATGATGATTTGCCTGAACCAACTCAACAAGTTGAATCTCCGCCCTCAGATGAA
GGTAAACCCGACGAGCAGCAGGAATCTTCTCCTGCTGATCCACTTGATCTGTTTACCCTT
GACGGCTTGTAA