Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078339
CDS Infomation

pacid=37445584 polypeptide=PGSC0003DMP400053065 locus=PGSC0003DMG402030499 ID=PGSC0003DMT400078339.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGATATTGAAGAACCCTTTAGGCATAGTTTTCAGGCAGATTCGTGGCAATCG
GGATCTATCTCATTCGGTAGATTTGAGAATGAAAGTTTATGTTGGGAGAGGAGGTCTTCT
TTTACACATAACAGGTATCTTGAAGAGGTTGAGAAATACTCCAAGCCAGGTTCTGTAACT
GAGAAGAAAGCATATTTTGAGGCACGTCTTAGAAAGAAGGCACTTCTACGCCAGAGCTCA
TCAGAGTGGCAGAATGGGACCGAATCTCAAGTTAGTGAAAATGATGGCCATGAGAATACA
AGTTATGAGGGGGACTTCGAGCATGTTAATGAGATTGGCCATTCGACACGCTTCGTTGAA
AATCATGATAGATCAGCCAATTTACTGGAGAATGAAAAGTATAGTGAAAATGATGTCACT
GAAAATGAAGGCTATGCGGGGGACTTTGAGCATGTTAACGAAGATGGCCATTCTGCACAC
TTTGATGAAAGTATTGATAGATCGATCCATTTATTGAAGAATGGAAAGTATCAAGCTGAG
AACACAGGTTATGATGGTGACTTTGAGCGAGTGAATAAGGTTGGTCATCCTACACGCTTT
GAAGAAAGTCTTGATGGATCTCACAACGGAGACATCGAGGTCACAGAATGTGGTGGAGTA
GATAGTATAATTCTCCATTCTGGACCTCAGACTGAACTAGCTACCGATAGTTCCGATGTT
CTTCAAAGTGTTCCTGAACATATGGAAGCTGAAGCAAATTTTCATCTCAATGCTGGAAAT
TCAGCTTTTGATGATGATCCTAAAACTGAGATTGAAGTAAAAGTGAAACTAGAGGGCCAA
GATAGCAGTATGGAGTTCTCATCAAACTCTGTTGATCTATCCTCTAATGCTCACGCCACT
GAGAAAGATGGTAGTGTTAATTCAGAACCTCAACGAAGTTCATCTTCAAAGGTGAGGACT
GTATCTCAATCTAGAGAAACAAAATCTAGGATGTTGTCCCAAGTTAGTGTTGCTAGTGGC
AAGGGGACAATCTCAAAACAAGCATATAAAGACATGCCAAGTAAACCAAATAGAAGGCAT
AGTGACGTTTCCTTGACACGAAAAGGAGAAAAGCCCAGATTGGACGCTCCTGGCGCTCTT
TTGCGTTCAACAGCGAGAATGCCAAAATCAGAGGTTTGTTCGGGTTCAAAAGCTAATGTA
CTCAATCAACAGAAAAGCACCGAACAACAGCCTAAAGCAAGAAAGGCTGCCGCTTCTCGT
CCTTCCTGTACAGAGAAAGTTAGTCATAGAGTACATCAAAGTGTAAACAGGGATAAGCAG
AGTGTAAGTTCATGTCAACCAGGCATGAAACAGAATGGATCTGGTTTCCTTTTCAAAAGT
GAAGAGCGCGCCAAGAAAAGGAAAGAGTTCCTTATGAAGTTAGAGGAGAAAATGCATGCA
GTTGAGGCAGAAAAACATCAGCTCCAAGCAAGAACTCAGGTAAAGAAAGAAGCAGAGTTA
AAACAGCTACGGAGAAATCTCAATTTCAAATCAACTCCCATGCCTGCCTTCTACCATGAA
CCTGGTCGTCGGTCAGACAGAAACAAGGAGTTAGTAAGTAAAACTAAATCAAGTAAATCA
CAAAGCAGACCTTCGACTTCAGGGGCTAGAGCTACTAGTGCAACAGAGAACACTGTTCCT
TGTTCCACTAGTGAACATCTAAATGTGGCTGATTCACCACAGGTTTCAGAAGTAACCAAT
CATCCTTCAGCAGAGTTATCTGACAGCAGCATCCCATCTTCAGCTCCAACAAGCAAAACG
TCCTGGCAGACTCGATCAAATAGAACAGTAGCTCCAAAGAGAGAGCAAGATAAAAGGCAG
GTCCTGAATTCTCCAAGACCGAGAACAGCAGATACAAACAAGGGAAACAAGGGCTTCAAA
GCTGAAGAGAAAACAAAGGTGGTTGCGCGAAGATCAATAGGAAACAATGCAATGAGAAAA
GATATTAGAAGTATTGATTTGAGCCATAGTACAAGAGTGGGTCGTTTAGCTGTTGGTGTT
GCTTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053065
PEP Infomation

pacid=37445584 transcript=PGSC0003DMT400078339 locus=PGSC0003DMG402030499 ID=PGSC0003DMT400078339.v4.03 annot-version=v4.03
Sequence

MAGDIEEPFRHSFQADSWQSGSISFGRFENESLCWERRSSFTHNRYLEEVEKYSKPGSVT
EKKAYFEARLRKKALLRQSSSEWQNGTESQVSENDGHENTSYEGDFEHVNEIGHSTRFVE
NHDRSANLLENEKYSENDVTENEGYAGDFEHVNEDGHSAHFDESIDRSIHLLKNGKYQAE
NTGYDGDFERVNKVGHPTRFEESLDGSHNGDIEVTECGGVDSIILHSGPQTELATDSSDV
LQSVPEHMEAEANFHLNAGNSAFDDDPKTEIEVKVKLEGQDSSMEFSSNSVDLSSNAHAT
EKDGSVNSEPQRSSSSKVRTVSQSRETKSRMLSQVSVASGKGTISKQAYKDMPSKPNRRH
SDVSLTRKGEKPRLDAPGALLRSTARMPKSEVCSGSKANVLNQQKSTEQQPKARKAAASR
PSCTEKVSHRVHQSVNRDKQSVSSCQPGMKQNGSGFLFKSEERAKKRKEFLMKLEEKMHA
VEAEKHQLQARTQVKKEAELKQLRRNLNFKSTPMPAFYHEPGRRSDRNKELVSKTKSSKS
QSRPSTSGARATSATENTVPCSTSEHLNVADSPQVSEVTNHPSAELSDSSIPSSAPTSKT
SWQTRSNRTVAPKREQDKRQVLNSPRPRTADTNKGNKGFKAEEKTKVVARRSIGNNAMRK
DIRSIDLSHSTRVGRLAVGVAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078339
Transcript Infomation

pacid=37445584 locus=PGSC0003DMG402030499 ID=PGSC0003DMT400078339.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGATATTGAAGAACCCTTTAGGCATAGTTTTCAGGCAGATTCGTGGCAATCG
GGATCTATCTCATTCGGTAGATTTGAGAATGAAAGTTTATGTTGGGAGAGGAGGTCTTCT
TTTACACATAACAGGTATCTTGAAGAGGTTGAGAAATACTCCAAGCCAGGTTCTGTAACT
GAGAAGAAAGCATATTTTGAGGCACGTCTTAGAAAGAAGGCACTTCTACGCCAGAGCTCA
TCAGAGTGGCAGAATGGGACCGAATCTCAAGTTAGTGAAAATGATGGCCATGAGAATACA
AGTTATGAGGGGGACTTCGAGCATGTTAATGAGATTGGCCATTCGACACGCTTCGTTGAA
AATCATGATAGATCAGCCAATTTACTGGAGAATGAAAAGTATAGTGAAAATGATGTCACT
GAAAATGAAGGCTATGCGGGGGACTTTGAGCATGTTAACGAAGATGGCCATTCTGCACAC
TTTGATGAAAGTATTGATAGATCGATCCATTTATTGAAGAATGGAAAGTATCAAGCTGAG
AACACAGGTTATGATGGTGACTTTGAGCGAGTGAATAAGGTTGGTCATCCTACACGCTTT
GAAGAAAGTCTTGATGGATCTCACAACGGAGACATCGAGGTCACAGAATGTGGTGGAGTA
GATAGTATAATTCTCCATTCTGGACCTCAGACTGAACTAGCTACCGATAGTTCCGATGTT
CTTCAAAGTGTTCCTGAACATATGGAAGCTGAAGCAAATTTTCATCTCAATGCTGGAAAT
TCAGCTTTTGATGATGATCCTAAAACTGAGATTGAAGTAAAAGTGAAACTAGAGGGCCAA
GATAGCAGTATGGAGTTCTCATCAAACTCTGTTGATCTATCCTCTAATGCTCACGCCACT
GAGAAAGATGGTAGTGTTAATTCAGAACCTCAACGAAGTTCATCTTCAAAGGTGAGGACT
GTATCTCAATCTAGAGAAACAAAATCTAGGATGTTGTCCCAAGTTAGTGTTGCTAGTGGC
AAGGGGACAATCTCAAAACAAGCATATAAAGACATGCCAAGTAAACCAAATAGAAGGCAT
AGTGACGTTTCCTTGACACGAAAAGGAGAAAAGCCCAGATTGGACGCTCCTGGCGCTCTT
TTGCGTTCAACAGCGAGAATGCCAAAATCAGAGGTTTGTTCGGGTTCAAAAGCTAATGTA
CTCAATCAACAGAAAAGCACCGAACAACAGCCTAAAGCAAGAAAGGCTGCCGCTTCTCGT
CCTTCCTGTACAGAGAAAGTTAGTCATAGAGTACATCAAAGTGTAAACAGGGATAAGCAG
AGTGTAAGTTCATGTCAACCAGGCATGAAACAGAATGGATCTGGTTTCCTTTTCAAAAGT
GAAGAGCGCGCCAAGAAAAGGAAAGAGTTCCTTATGAAGTTAGAGGAGAAAATGCATGCA
GTTGAGGCAGAAAAACATCAGCTCCAAGCAAGAACTCAGGTAAAGAAAGAAGCAGAGTTA
AAACAGCTACGGAGAAATCTCAATTTCAAATCAACTCCCATGCCTGCCTTCTACCATGAA
CCTGGTCGTCGGTCAGACAGAAACAAGGAGTTAGTAAGTAAAACTAAATCAAGTAAATCA
CAAAGCAGACCTTCGACTTCAGGGGCTAGAGCTACTAGTGCAACAGAGAACACTGTTCCT
TGTTCCACTAGTGAACATCTAAATGTGGCTGATTCACCACAGGTTTCAGAAGTAACCAAT
CATCCTTCAGCAGAGTTATCTGACAGCAGCATCCCATCTTCAGCTCCAACAAGCAAAACG
TCCTGGCAGACTCGATCAAATAGAACAGTAGCTCCAAAGAGAGAGCAAGATAAAAGGCAG
GTCCTGAATTCTCCAAGACCGAGAACAGCAGATACAAACAAGGGAAACAAGGGCTTCAAA
GCTGAAGAGAAAACAAAGGTGGTTGCGCGAAGATCAATAGGAAACAATGCAATGAGAAAA
GATATTAGAAGTATTGATTTGAGCCATAGTACAAGAGTGGGTCGTTTAGCTGTTGGTGTT
GCTTCCTAG