Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078299
CDS Infomation

pacid=37452628 polypeptide=PGSC0003DMP400053034 locus=PGSC0003DMG400030474 ID=PGSC0003DMT400078299.v4.03 annot-version=v4.03
Sequence

ATGAGAATCTACCACACCAATCAACTGCTACATTCTCTTTTTGTTGTAGCAACTCTTCTT
TCGCTGTGCCGTGGTGATCTAAACTCAGACAAACAAGCCCTTCTTGACTTTGCTGCAGCA
GTCCCACATGGCTGGAAGATCAACTGGGATCCTGCCACTCCTATTTGCTCATCTTGGGTA
GGCGTTACTTGTAGTAATGATGGAGCCCATGTGGTGGAAGTACGACTTCCAGGAGTTGGA
CTCATTGGTTCACTTCCAAAAAATACTTTTGGGAAGATGGATAGCTTAAGGATTATCAGC
CTTCGATCCAATCGTCTCAGTGGAAACCTTCCTTCCGCTATCACTTCACTTCCTTCTCTC
CAATTCCTGTTCTTACAGCAAAATAACTTATCTGGACCTATTCCTTCTTCTCTTTCAAAT
AAACTGAATGTTTTGGACCTATCTCATAATTTCTTCACTGGAAAGATACCTGAAACAATT
CAGAATTTGTCTCAGCTAACAGGTTTAAGCCTCCAGAATAACTTGCTTTCTGGACCCATA
CCCAATATTACTCTTCCAAGGCTAAAACATATTAATATAAGCCACAACAATCTTAATGGT
TCTATTCCATTATCCCTCCAAAAGTTTCCAAATTCCTCCTTTGTGGGGAACTCACTCTTG
TGTGGACTACCCTTAAATCCTTGTTCACCTGTTCTACCACCATCCCCTCCTTCCCCTTCC
CCTTCCCCACCTGCACCCTCCCCAAACACTCAAGAAAAAAGTTCAAAAAAGAAACTTAAA
CTAGGAGTTATTCTTGCTATTGCTGCTGGAGGGGTTGTGCTGGTCTTGCTGCTAGTTGTG
ATCCTCGTTTTGTGCTGCCTGAAAAGAAAAAGGGGTGATGGCAGAGGTGTGCGGAAAGGG
AAATCTCCGGGTGGAGGAAGGAGTGAAAAACCGAGGGAAGAGTTCGGTAGTGGGGTGCAA
GAACCTGACAAAAATAAGCTTGTTTTCTTTGAAGGCAGCTCTTACAATTTCGATCTCGAG
GACCTATTGAGGGCCTCAGCTGAAGTGCTAGGAAAGGGGAGTTTTGGAACTGCTTATAAG
GCTATTTTGGAGGAGTCATCAACAGTGGTGGTTAAAAGACTAAAAGAAGTCATTGTGGGG
AAGAAGGACTTTGAACAGCAGATGGAAATTATTGGTAGAGTTGGACAGCATCCAAATGTG
GTTCCTTTACGTGCTTATTATTACTCCAAGGATGAGAAGTTACTGGTGTATGGTTATTTC
TCAATGGGCAACTTGTCAATGCTCTTGCATGGAAACAGGACTCCGGGAAGGACTCCATTG
GACTGGGAGTCGAGAGTTAAAATATCTCTTGCAGCAGCAAAGGGTATTGCCCACATCCAT
TCAATGGGTGGTCCAAAATTTACTCATGGAAATATAAAGTCCTCAAACGTCCTACTCAAG
CAAGATATGGAAGCTTGCATCTCAGATTTTGGTTTAGCCCCTATAATGAACTTCCCTGCA
GCCCCATCTCGATATCCAGGGTACCGTGCTCCTGAGGTGATAGAAAGCCGAAAGCATAGT
CATAAATCAGATGTCTACAGCTTCGGTGTCTTACTACTCGAGATGCTTACTGGTAAGCAG
CCTATGCAATCACCAGGGCGTGATGACATGGTTGACCTTCCTAGGTGGGTCCAATCAGTT
GTCAGGGAGGAATGGACGTCAGAGGTTTTTGACGTCGATTTGATGAGATTTCAAAACATT
GAAGAAGAGATGGTACAAATGCTGCAAATTGCTATGGCATGTGTTGTAAAGGTCCCGGAC
ATGCGACCCAACATGGAGGAAGTTGTTAGAATGATTGAAGACGTCAGGCAATCTAACTCC
GAAAACAGGCATTCTTCAGAAAGAGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400053034
PEP Infomation

pacid=37452628 transcript=PGSC0003DMT400078299 locus=PGSC0003DMG400030474 ID=PGSC0003DMT400078299.v4.03 annot-version=v4.03
Sequence

MRIYHTNQLLHSLFVVATLLSLCRGDLNSDKQALLDFAAAVPHGWKINWDPATPICSSWV
GVTCSNDGAHVVEVRLPGVGLIGSLPKNTFGKMDSLRIISLRSNRLSGNLPSAITSLPSL
QFLFLQQNNLSGPIPSSLSNKLNVLDLSHNFFTGKIPETIQNLSQLTGLSLQNNLLSGPI
PNITLPRLKHINISHNNLNGSIPLSLQKFPNSSFVGNSLLCGLPLNPCSPVLPPSPPSPS
PSPPAPSPNTQEKSSKKKLKLGVILAIAAGGVVLVLLLVVILVLCCLKRKRGDGRGVRKG
KSPGGGRSEKPREEFGSGVQEPDKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSFGTAYK
AILEESSTVVVKRLKEVIVGKKDFEQQMEIIGRVGQHPNVVPLRAYYYSKDEKLLVYGYF
SMGNLSMLLHGNRTPGRTPLDWESRVKISLAAAKGIAHIHSMGGPKFTHGNIKSSNVLLK
QDMEACISDFGLAPIMNFPAAPSRYPGYRAPEVIESRKHSHKSDVYSFGVLLLEMLTGKQ
PMQSPGRDDMVDLPRWVQSVVREEWTSEVFDVDLMRFQNIEEEMVQMLQIAMACVVKVPD
MRPNMEEVVRMIEDVRQSNSENRHSSERE*

Transcript Sequence

Transcript ID

PGSC0003DMT400078299
Transcript Infomation

pacid=37452628 locus=PGSC0003DMG400030474 ID=PGSC0003DMT400078299.v4.03 annot-version=v4.03
Sequence

ATGAGAATCTACCACACCAATCAACTGCTACATTCTCTTTTTGTTGTAGCAACTCTTCTT
TCGCTGTGCCGTGGTGATCTAAACTCAGACAAACAAGCCCTTCTTGACTTTGCTGCAGCA
GTCCCACATGGCTGGAAGATCAACTGGGATCCTGCCACTCCTATTTGCTCATCTTGGGTA
GGCGTTACTTGTAGTAATGATGGAGCCCATGTGGTGGAAGTACGACTTCCAGGAGTTGGA
CTCATTGGTTCACTTCCAAAAAATACTTTTGGGAAGATGGATAGCTTAAGGATTATCAGC
CTTCGATCCAATCGTCTCAGTGGAAACCTTCCTTCCGCTATCACTTCACTTCCTTCTCTC
CAATTCCTGTTCTTACAGCAAAATAACTTATCTGGACCTATTCCTTCTTCTCTTTCAAAT
AAACTGAATGTTTTGGACCTATCTCATAATTTCTTCACTGGAAAGATACCTGAAACAATT
CAGAATTTGTCTCAGCTAACAGGTTTAAGCCTCCAGAATAACTTGCTTTCTGGACCCATA
CCCAATATTACTCTTCCAAGGCTAAAACATATTAATATAAGCCACAACAATCTTAATGGT
TCTATTCCATTATCCCTCCAAAAGTTTCCAAATTCCTCCTTTGTGGGGAACTCACTCTTG
TGTGGACTACCCTTAAATCCTTGTTCACCTGTTCTACCACCATCCCCTCCTTCCCCTTCC
CCTTCCCCACCTGCACCCTCCCCAAACACTCAAGAAAAAAGTTCAAAAAAGAAACTTAAA
CTAGGAGTTATTCTTGCTATTGCTGCTGGAGGGGTTGTGCTGGTCTTGCTGCTAGTTGTG
ATCCTCGTTTTGTGCTGCCTGAAAAGAAAAAGGGGTGATGGCAGAGGTGTGCGGAAAGGG
AAATCTCCGGGTGGAGGAAGGAGTGAAAAACCGAGGGAAGAGTTCGGTAGTGGGGTGCAA
GAACCTGACAAAAATAAGCTTGTTTTCTTTGAAGGCAGCTCTTACAATTTCGATCTCGAG
GACCTATTGAGGGCCTCAGCTGAAGTGCTAGGAAAGGGGAGTTTTGGAACTGCTTATAAG
GCTATTTTGGAGGAGTCATCAACAGTGGTGGTTAAAAGACTAAAAGAAGTCATTGTGGGG
AAGAAGGACTTTGAACAGCAGATGGAAATTATTGGTAGAGTTGGACAGCATCCAAATGTG
GTTCCTTTACGTGCTTATTATTACTCCAAGGATGAGAAGTTACTGGTGTATGGTTATTTC
TCAATGGGCAACTTGTCAATGCTCTTGCATGGAAACAGGACTCCGGGAAGGACTCCATTG
GACTGGGAGTCGAGAGTTAAAATATCTCTTGCAGCAGCAAAGGGTATTGCCCACATCCAT
TCAATGGGTGGTCCAAAATTTACTCATGGAAATATAAAGTCCTCAAACGTCCTACTCAAG
CAAGATATGGAAGCTTGCATCTCAGATTTTGGTTTAGCCCCTATAATGAACTTCCCTGCA
GCCCCATCTCGATATCCAGGGTACCGTGCTCCTGAGGTGATAGAAAGCCGAAAGCATAGT
CATAAATCAGATGTCTACAGCTTCGGTGTCTTACTACTCGAGATGCTTACTGGTAAGCAG
CCTATGCAATCACCAGGGCGTGATGACATGGTTGACCTTCCTAGGTGGGTCCAATCAGTT
GTCAGGGAGGAATGGACGTCAGAGGTTTTTGACGTCGATTTGATGAGATTTCAAAACATT
GAAGAAGAGATGGTACAAATGCTGCAAATTGCTATGGCATGTGTTGTAAAGGTCCCGGAC
ATGCGACCCAACATGGAGGAAGTTGTTAGAATGATTGAAGACGTCAGGCAATCTAACTCC
GAAAACAGGCATTCTTCAGAAAGAGAATAG