Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078227
CDS Infomation

pacid=37451094 polypeptide=PGSC0003DMP400052973 locus=PGSC0003DMG400030441 ID=PGSC0003DMT400078227.v4.03 annot-version=v4.03
Sequence

ATGGGAGTGAAAGTTGCCACTACATGTTTGCAATGGGCTCAACCTTTTGTTCCTCACTCA
ACCTCTTCTTCTTCTCAAACTTTTGCTTCTGCAATTTCTTCCCCTTCTTCCTCAAAACGC
CATAGTTTTAGCAGAAAAGGGTCTCTTATTTGCCGGTATGTCCATAGGCCCGACAAATCC
GCACTTTTTGGTACCCAATTGTTGAATCTATACAGATCTAAATCTTGTGAGCAGCTTAAG
CCAAGGACTAGAACAATTAGAAGGGCTTCTAGCACCAGCGCCAGCTTAGATTCATTTTCA
GATGAAGAATTTTCGAAGGAGATACAAGAATTGGCAAAGAAATTCCAGTTATCAGACGTT
GAAAATCCCAGTACTATAAGTTCTCAGAGTGACTCTATGGAAACAAGGGATGAAAGTATT
AGCAGTGATAGTTATGATATTAAGTTTTTGGAGAATCAGAGGCCGTTTGATCCTCTAGAA
CAACCGGATTGGCCTGAAAGAGACGAGATAATTCCTGCGAATATTGAATGGAAGGCGAAT
AGTGTGGATCTCCCTTTTTCTCTTAGGATTATAAAGAGAAAAAAACAATGGCAAGATGGG
GTCAGAGATACAGGAGAGTCAGCATACTGTTCTGTGAAAAAAGCATTTTCGAATATGGTG
TTCATAATTCGAGAGCTGCAAAGCTATACTTTGCAGATGAGGGAATTGCTGTTTTATGAA
GATCTACAGGGGATCTTAGTGAGAGTACAGAAGGAGATGCATGCATCTTTTGTGTGGTTA
TTCCAGCAAGTATTCTCACATACACCAACTTTAATGGTATATGTGATGATACTGTTGGCT
AATTATAGTGTTCATTCTATGGCAAGCAGTGCTGCTATTGCTGCTACACCGCCACCACTC
ACCGAGACTGTTTCTACTTTAGATGAGAGTCATTTCAACCAGAAATTTGATTCTTCTGCA
ATTAAGACATTTTCAGTGTCATCTTCAAGTGGAAAAGTTACTTCAATTGGTGGAGGCAAT
GGTGGTGGGAGCTACAAGCCAATTGCTAGTGGAAATGATGGTGATGGGAGGTTTGACGGA
CAGATGTCGAATGGGATTTCTTCAATCGAGCGCGGTAGGGTTGGTGAAGAAGAGTGTGTA
TCTGGACAAGAAACAACGGAAGAAGAGTTGCAGATTTGGAATTCAATTGTAGATGAGGCT
TCTAAGATGCAGGCTTCAGTGAGAGATGAGTCCTTGGATCATGAAACCATGCAAAGATTT
GTCTCTCCAATAAACGCAAATATTGAAGTCGGCAACTATGCAGAGTATATCAAAACAGAG
CTGCTGTATCTAGTGGAGCTAAAGCAAGAACCGCAAAATACACTATTGCTAACCAATTAT
GCTCAATTTCTTTTCTTGGTCGCCCAAGATTATGACAGAGCAGAAAAGTACTTCAAGAAA
GCAGCAGAGGTGGAGCCAAAGGATGCAGAGGCATTGAATAAGTATGCAAATTTTCTGTGG
AAAGTAAGGAAGGACCTTTGGGCTGCAGAAGAGACGTTTAATCAAGCTATAGCTGCAGAA
CCAAGCAATAACTTTTATGCAGCTAATTATGCTCATTTTCTTTGGAATACTGGTGGTGAA
GATACTTGTTACCCACTCGACTCTTCCAATACTGATCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052973
PEP Infomation

pacid=37451094 transcript=PGSC0003DMT400078227 locus=PGSC0003DMG400030441 ID=PGSC0003DMT400078227.v4.03 annot-version=v4.03
Sequence

MGVKVATTCLQWAQPFVPHSTSSSSQTFASAISSPSSSKRHSFSRKGSLICRYVHRPDKS
ALFGTQLLNLYRSKSCEQLKPRTRTIRRASSTSASLDSFSDEEFSKEIQELAKKFQLSDV
ENPSTISSQSDSMETRDESISSDSYDIKFLENQRPFDPLEQPDWPERDEIIPANIEWKAN
SVDLPFSLRIIKRKKQWQDGVRDTGESAYCSVKKAFSNMVFIIRELQSYTLQMRELLFYE
DLQGILVRVQKEMHASFVWLFQQVFSHTPTLMVYVMILLANYSVHSMASSAAIAATPPPL
TETVSTLDESHFNQKFDSSAIKTFSVSSSSGKVTSIGGGNGGGSYKPIASGNDGDGRFDG
QMSNGISSIERGRVGEEECVSGQETTEEELQIWNSIVDEASKMQASVRDESLDHETMQRF
VSPINANIEVGNYAEYIKTELLYLVELKQEPQNTLLLTNYAQFLFLVAQDYDRAEKYFKK
AAEVEPKDAEALNKYANFLWKVRKDLWAAEETFNQAIAAEPSNNFYAANYAHFLWNTGGE
DTCYPLDSSNTDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078227
Transcript Infomation

pacid=37451094 locus=PGSC0003DMG400030441 ID=PGSC0003DMT400078227.v4.03 annot-version=v4.03
Sequence

ATGGGAGTGAAAGTTGCCACTACATGTTTGCAATGGGCTCAACCTTTTGTTCCTCACTCA
ACCTCTTCTTCTTCTCAAACTTTTGCTTCTGCAATTTCTTCCCCTTCTTCCTCAAAACGC
CATAGTTTTAGCAGAAAAGGGTCTCTTATTTGCCGGTATGTCCATAGGCCCGACAAATCC
GCACTTTTTGGTACCCAATTGTTGAATCTATACAGATCTAAATCTTGTGAGCAGCTTAAG
CCAAGGACTAGAACAATTAGAAGGGCTTCTAGCACCAGCGCCAGCTTAGATTCATTTTCA
GATGAAGAATTTTCGAAGGAGATACAAGAATTGGCAAAGAAATTCCAGTTATCAGACGTT
GAAAATCCCAGTACTATAAGTTCTCAGAGTGACTCTATGGAAACAAGGGATGAAAGTATT
AGCAGTGATAGTTATGATATTAAGTTTTTGGAGAATCAGAGGCCGTTTGATCCTCTAGAA
CAACCGGATTGGCCTGAAAGAGACGAGATAATTCCTGCGAATATTGAATGGAAGGCGAAT
AGTGTGGATCTCCCTTTTTCTCTTAGGATTATAAAGAGAAAAAAACAATGGCAAGATGGG
GTCAGAGATACAGGAGAGTCAGCATACTGTTCTGTGAAAAAAGCATTTTCGAATATGGTG
TTCATAATTCGAGAGCTGCAAAGCTATACTTTGCAGATGAGGGAATTGCTGTTTTATGAA
GATCTACAGGGGATCTTAGTGAGAGTACAGAAGGAGATGCATGCATCTTTTGTGTGGTTA
TTCCAGCAAGTATTCTCACATACACCAACTTTAATGGTATATGTGATGATACTGTTGGCT
AATTATAGTGTTCATTCTATGGCAAGCAGTGCTGCTATTGCTGCTACACCGCCACCACTC
ACCGAGACTGTTTCTACTTTAGATGAGAGTCATTTCAACCAGAAATTTGATTCTTCTGCA
ATTAAGACATTTTCAGTGTCATCTTCAAGTGGAAAAGTTACTTCAATTGGTGGAGGCAAT
GGTGGTGGGAGCTACAAGCCAATTGCTAGTGGAAATGATGGTGATGGGAGGTTTGACGGA
CAGATGTCGAATGGGATTTCTTCAATCGAGCGCGGTAGGGTTGGTGAAGAAGAGTGTGTA
TCTGGACAAGAAACAACGGAAGAAGAGTTGCAGATTTGGAATTCAATTGTAGATGAGGCT
TCTAAGATGCAGGCTTCAGTGAGAGATGAGTCCTTGGATCATGAAACCATGCAAAGATTT
GTCTCTCCAATAAACGCAAATATTGAAGTCGGCAACTATGCAGAGTATATCAAAACAGAG
CTGCTGTATCTAGTGGAGCTAAAGCAAGAACCGCAAAATACACTATTGCTAACCAATTAT
GCTCAATTTCTTTTCTTGGTCGCCCAAGATTATGACAGAGCAGAAAAGTACTTCAAGAAA
GCAGCAGAGGTGGAGCCAAAGGATGCAGAGGCATTGAATAAGTATGCAAATTTTCTGTGG
AAAGTAAGGAAGGACCTTTGGGCTGCAGAAGAGACGTTTAATCAAGCTATAGCTGCAGAA
CCAAGCAATAACTTTTATGCAGCTAATTATGCTCATTTTCTTTGGAATACTGGTGGTGAA
GATACTTGTTACCCACTCGACTCTTCCAATACTGATCTATAA