Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078224
CDS Infomation

pacid=37450602 polypeptide=PGSC0003DMP400052970 locus=PGSC0003DMG400030439 ID=PGSC0003DMT400078224.v4.03 annot-version=v4.03
Sequence

ATGGATTGTATTTACAAAGATCCAAATGCTGCAATTGAAGAAAGAGTAAAAGATCTTCTT
TCTAAAATGACTGTTGAAGAAAAAATTGGTCAAATCACTCAGATCGAAAGAGCTGTTGCT
AATCCTTCTGCTATTAGAGATCGTTGCATTGGGAGTGTTTTGAGTGGAGGTGGAAGTAGA
CCTTTTGAGAATGCAGAATCAGCTGATTGGGCTAATATGATTGATGGATTTCAAAAGGGT
GCAGTTGAGTCCAGGCTTGGCATTCCTATTTTCTATGGGACTGATGCTATTCATGGCAAT
AATAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGGCTTGGTGCCACCAGAGAT
GCTGATTTAGTAAGAAGGATAGGAGTGGTGACAGCTCTTGAAACCAGGGCGTGTGGATCT
CAGTATGCTTTTGCTCCTTGTGTTGCTGTTGCAAAAGACCCTAGATGGGGAAGATTTTAC
GAGAGTTACAGTGAAGATACGGAAGTTGTAAGAAAGATGACCTCCCTCGTCTCAGGCTTG
CAAGGTCAGCCACCAGAAGGACATCCATATGGCTACCCTTATGTTGCTGGAAGAAATTCT
GTCATGGCAAGTGCAAAGCATTTTGTTGGTGATGGGGCAACTGAGAATGGTACAAATGAA
GGAAATACGATAGCATCACATGATGATATGTTTAATATCCACCTAGCACCATATATAGAC
TGTATTGCCCAAGGAGTTTGCACTGTTATGGCCTCCTACTCCAGCTGGAATGGAGACAAA
ATGCACTCTCATCGATATCTTTTAACCGAGGTCTTGAAAGAAAAGCTTGGATTCAAGGGT
CTCTTGATAACAGACTGGGAAGCACTTGAACGGCTTACTGACCCTCATGATGCTGATTAT
CGTCAATCAGTCAAGTCAACCATTAATGCTGGAATTGATATGGTAATGGTGCCATTTAGA
TATGAATTATTTTTGGAGCAGCTGCAATCACTGGTAGAATCAGGGGAGATACCGTTGACC
AGGATAGATGACGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTACTGGATTATTTGAA
CATCCGTTTACAGATAGATCATTGATAGATTTGGTTGGTTGCAAGGCACATAGAGAGCTA
GCACGTGAAGCTGTTCGCAAATCCTTAGTTTTGTTGAAAAATGGGAAAGATCCAAAGAAA
CCATTTCTGCCTCTAGATAAGACGGCCAAAAAGATCCTTGTTGCTGGAACTCATGCTGAT
GATCTTGGGTATCAATGTGGAGGGTGGACAGCTACTTGGACAGGACTCAGTGGCAGAATC
ACAGTTGGCACAACCATAATGGATGCAATAAGGGAGATGTTGGGAGACAAAACAGAGATA
GTCTTTGAGCCAAATCCTACTGCAGAAACTTTTGCTAGTCAAGACTTCTCTTTTGCTATC
GTGGCGATTGGTGAGGGTCCATATTGTGAAACTGGTGGTGATGATCCAGAGTTAAAAATT
CCATTTAATGGAACAGAAATTGCAACTTTTGTTGCTGACAGAGTTCCCACGGTGACAATT
CTCATTTCTGGAAGACCTATGGTTATCGAACCACCTCTCTTGGAAAAAGTAGATGCATTT
GTTGCAGCTTGGTTGCCTGGAACTGAAGGAGCTGGAATCACAGATGTCCTTTTTGGAGAC
TATCCATTTCAAGGGAAACTACCTGTGACATGGTTTAAAACTGTTGATCAAATTCCAATG
CATGTTCACGGGAATTCAAATCCTCTATTTCCTTTCGGATTTGGTCTTACATCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052970
PEP Infomation

pacid=37450602 transcript=PGSC0003DMT400078224 locus=PGSC0003DMG400030439 ID=PGSC0003DMT400078224.v4.03 annot-version=v4.03
Sequence

MDCIYKDPNAAIEERVKDLLSKMTVEEKIGQITQIERAVANPSAIRDRCIGSVLSGGGSR
PFENAESADWANMIDGFQKGAVESRLGIPIFYGTDAIHGNNNVWGATIFPHNIGLGATRD
ADLVRRIGVVTALETRACGSQYAFAPCVAVAKDPRWGRFYESYSEDTEVVRKMTSLVSGL
QGQPPEGHPYGYPYVAGRNSVMASAKHFVGDGATENGTNEGNTIASHDDMFNIHLAPYID
CIAQGVCTVMASYSSWNGDKMHSHRYLLTEVLKEKLGFKGLLITDWEALERLTDPHDADY
RQSVKSTINAGIDMVMVPFRYELFLEQLQSLVESGEIPLTRIDDAVERILRVKFVTGLFE
HPFTDRSLIDLVGCKAHRELAREAVRKSLVLLKNGKDPKKPFLPLDKTAKKILVAGTHAD
DLGYQCGGWTATWTGLSGRITVGTTIMDAIREMLGDKTEIVFEPNPTAETFASQDFSFAI
VAIGEGPYCETGGDDPELKIPFNGTEIATFVADRVPTVTILISGRPMVIEPPLLEKVDAF
VAAWLPGTEGAGITDVLFGDYPFQGKLPVTWFKTVDQIPMHVHGNSNPLFPFGFGLTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078224
Transcript Infomation

pacid=37450602 locus=PGSC0003DMG400030439 ID=PGSC0003DMT400078224.v4.03 annot-version=v4.03
Sequence

ATGGATTGTATTTACAAAGATCCAAATGCTGCAATTGAAGAAAGAGTAAAAGATCTTCTT
TCTAAAATGACTGTTGAAGAAAAAATTGGTCAAATCACTCAGATCGAAAGAGCTGTTGCT
AATCCTTCTGCTATTAGAGATCGTTGCATTGGGAGTGTTTTGAGTGGAGGTGGAAGTAGA
CCTTTTGAGAATGCAGAATCAGCTGATTGGGCTAATATGATTGATGGATTTCAAAAGGGT
GCAGTTGAGTCCAGGCTTGGCATTCCTATTTTCTATGGGACTGATGCTATTCATGGCAAT
AATAATGTTTGGGGTGCCACTATTTTTCCTCACAACATTGGGCTTGGTGCCACCAGAGAT
GCTGATTTAGTAAGAAGGATAGGAGTGGTGACAGCTCTTGAAACCAGGGCGTGTGGATCT
CAGTATGCTTTTGCTCCTTGTGTTGCTGTTGCAAAAGACCCTAGATGGGGAAGATTTTAC
GAGAGTTACAGTGAAGATACGGAAGTTGTAAGAAAGATGACCTCCCTCGTCTCAGGCTTG
CAAGGTCAGCCACCAGAAGGACATCCATATGGCTACCCTTATGTTGCTGGAAGAAATTCT
GTCATGGCAAGTGCAAAGCATTTTGTTGGTGATGGGGCAACTGAGAATGGTACAAATGAA
GGAAATACGATAGCATCACATGATGATATGTTTAATATCCACCTAGCACCATATATAGAC
TGTATTGCCCAAGGAGTTTGCACTGTTATGGCCTCCTACTCCAGCTGGAATGGAGACAAA
ATGCACTCTCATCGATATCTTTTAACCGAGGTCTTGAAAGAAAAGCTTGGATTCAAGGGT
CTCTTGATAACAGACTGGGAAGCACTTGAACGGCTTACTGACCCTCATGATGCTGATTAT
CGTCAATCAGTCAAGTCAACCATTAATGCTGGAATTGATATGGTAATGGTGCCATTTAGA
TATGAATTATTTTTGGAGCAGCTGCAATCACTGGTAGAATCAGGGGAGATACCGTTGACC
AGGATAGATGACGCTGTTGAAAGAATCTTGAGAGTCAAATTTGTTACTGGATTATTTGAA
CATCCGTTTACAGATAGATCATTGATAGATTTGGTTGGTTGCAAGGCACATAGAGAGCTA
GCACGTGAAGCTGTTCGCAAATCCTTAGTTTTGTTGAAAAATGGGAAAGATCCAAAGAAA
CCATTTCTGCCTCTAGATAAGACGGCCAAAAAGATCCTTGTTGCTGGAACTCATGCTGAT
GATCTTGGGTATCAATGTGGAGGGTGGACAGCTACTTGGACAGGACTCAGTGGCAGAATC
ACAGTTGGCACAACCATAATGGATGCAATAAGGGAGATGTTGGGAGACAAAACAGAGATA
GTCTTTGAGCCAAATCCTACTGCAGAAACTTTTGCTAGTCAAGACTTCTCTTTTGCTATC
GTGGCGATTGGTGAGGGTCCATATTGTGAAACTGGTGGTGATGATCCAGAGTTAAAAATT
CCATTTAATGGAACAGAAATTGCAACTTTTGTTGCTGACAGAGTTCCCACGGTGACAATT
CTCATTTCTGGAAGACCTATGGTTATCGAACCACCTCTCTTGGAAAAAGTAGATGCATTT
GTTGCAGCTTGGTTGCCTGGAACTGAAGGAGCTGGAATCACAGATGTCCTTTTTGGAGAC
TATCCATTTCAAGGGAAACTACCTGTGACATGGTTTAAAACTGTTGATCAAATTCCAATG
CATGTTCACGGGAATTCAAATCCTCTATTTCCTTTCGGATTTGGTCTTACATCCTAA