Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078178
CDS Infomation

pacid=37450424 polypeptide=PGSC0003DMP400052932 locus=PGSC0003DMG400030413 ID=PGSC0003DMT400078178.v4.03 annot-version=v4.03
Sequence

ATGAGTTTCATTTTTTTCTTGAAAATGTTAGCTTCTTTCTTTCTCTTTTTGTTCATACTA
TTTTCTTTCACAAAGAAGAAAAACAAAGGAAAAAAACTCCTTCCAAGTCCAAGAAAATTG
CCTATTATAGGAAACCTTCATCAACTTGGAAAATTGCCTCATCGTTCACTTCAAAAACTT
TCTAATGAATATGGTGATTTAATTTTCTTGCAATTAGGTTCAATCCCAACTCTCCTTGTC
TCCTCCGCCGACGTTGCGAAAGAGATCTTTAGAGTACATGATGTTGCTTTTGCTGGCCGT
CCTCCCTTGTATGCTGCAAAAAGACTTAGTTATAATTGTTGTAACGTGTCTTTTGCTCCT
TACGGTAATTACTGGAGAGAGGCCCGGAAAATTCTAGCTTTAGAGTTGCTAAGCGCAAAG
AGAGTAGAAAGTTTCTCATCAATTCGCGATGAGGAAGTGAGTCGTTTGATTCAAGAAATT
GGCAAGTCTTTAAACTCATCTATTAACATAAGTGCATTGGCACTAACCTTGTCAAATAAC
GTTGTTTGTCGAGTGGCTTTTGGGAAAGGAAGTGATGATGAAAGTGGATATGATAATGGA
GGGAAAAAGTTTCATGAAATTCTTTATGACACACAAGAATTGTTGGGTGAGTTTAATGTT
GCTGATTATTTTCCAAAAATGGCATGGATTAACAAATTTAATGGGCTAGATGAAAGATTG
GAAAAGAATTTTAGAGAATTGGATAAGTATTATGACAAAGTAATAGAAGATCATGTTGAT
TCAAGAAATTGGATTAAAGAAAAAGATGATGAAGATCTTGTTGATGTATTGCTTCGAATT
CAAAAGGATCCAAACCGAGATGTACCTCTTCAAGATAGTCACATCAAGGGCCTTCTTGCG
GATATATTCATAGCAGGAACTGATACATCAGCAACAACCATAGAATGGATCATGGCAGAA
CTTATGTTAAATCCAAAAGTCATGAAAAAAGTTCAACAAGAAGTGAGACAAGTTGCTAAG
GGAAAACAAAAGGTCCAAGAAACTGATCTTTACAAACTTGAATACATGAAATTGGTCATA
AAAGAATCCCTTAGACTTCATCCACCAGCCCCATTACTAATCCCTCGAGTAACAACATCT
AGTTGCAAAATAATGGACTACGAAATCCCAGAAAATACAAGAGTCCTCATCAACGCGACA
GCAATTGGGACCGATCCAAAATACTGGGAAAATCCATTGACGTTTATACCAGAGAGATTC
TTGAATAAGGATATTGATTATAGAGGTCAAAATTATGAGTTTTTGCCATTTGGGGCAGGG
AGAAGAGGGTGTCCAGGAATTAATTTTTCTGTACCACTTGTTGAGCTTGCAATTGCTAAT
TTATTATTTCATTATGATTGGACACTACCTCAAGGGCTGAAAGCTAAGGATCTTGATATG
GAAGAAGCTTTGGGGATTACTATGCACAAGAAAATTCCCCTTTGCTTAGCAGCTTCTTAT
TATGACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052932
PEP Infomation

pacid=37450424 transcript=PGSC0003DMT400078178 locus=PGSC0003DMG400030413 ID=PGSC0003DMT400078178.v4.03 annot-version=v4.03
Sequence

MSFIFFLKMLASFFLFLFILFSFTKKKNKGKKLLPSPRKLPIIGNLHQLGKLPHRSLQKL
SNEYGDLIFLQLGSIPTLLVSSADVAKEIFRVHDVAFAGRPPLYAAKRLSYNCCNVSFAP
YGNYWREARKILALELLSAKRVESFSSIRDEEVSRLIQEIGKSLNSSINISALALTLSNN
VVCRVAFGKGSDDESGYDNGGKKFHEILYDTQELLGEFNVADYFPKMAWINKFNGLDERL
EKNFRELDKYYDKVIEDHVDSRNWIKEKDDEDLVDVLLRIQKDPNRDVPLQDSHIKGLLA
DIFIAGTDTSATTIEWIMAELMLNPKVMKKVQQEVRQVAKGKQKVQETDLYKLEYMKLVI
KESLRLHPPAPLLIPRVTTSSCKIMDYEIPENTRVLINATAIGTDPKYWENPLTFIPERF
LNKDIDYRGQNYEFLPFGAGRRGCPGINFSVPLVELAIANLLFHYDWTLPQGLKAKDLDM
EEALGITMHKKIPLCLAASYYDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078178
Transcript Infomation

pacid=37450424 locus=PGSC0003DMG400030413 ID=PGSC0003DMT400078178.v4.03 annot-version=v4.03
Sequence

ATGAGTTTCATTTTTTTCTTGAAAATGTTAGCTTCTTTCTTTCTCTTTTTGTTCATACTA
TTTTCTTTCACAAAGAAGAAAAACAAAGGAAAAAAACTCCTTCCAAGTCCAAGAAAATTG
CCTATTATAGGAAACCTTCATCAACTTGGAAAATTGCCTCATCGTTCACTTCAAAAACTT
TCTAATGAATATGGTGATTTAATTTTCTTGCAATTAGGTTCAATCCCAACTCTCCTTGTC
TCCTCCGCCGACGTTGCGAAAGAGATCTTTAGAGTACATGATGTTGCTTTTGCTGGCCGT
CCTCCCTTGTATGCTGCAAAAAGACTTAGTTATAATTGTTGTAACGTGTCTTTTGCTCCT
TACGGTAATTACTGGAGAGAGGCCCGGAAAATTCTAGCTTTAGAGTTGCTAAGCGCAAAG
AGAGTAGAAAGTTTCTCATCAATTCGCGATGAGGAAGTGAGTCGTTTGATTCAAGAAATT
GGCAAGTCTTTAAACTCATCTATTAACATAAGTGCATTGGCACTAACCTTGTCAAATAAC
GTTGTTTGTCGAGTGGCTTTTGGGAAAGGAAGTGATGATGAAAGTGGATATGATAATGGA
GGGAAAAAGTTTCATGAAATTCTTTATGACACACAAGAATTGTTGGGTGAGTTTAATGTT
GCTGATTATTTTCCAAAAATGGCATGGATTAACAAATTTAATGGGCTAGATGAAAGATTG
GAAAAGAATTTTAGAGAATTGGATAAGTATTATGACAAAGTAATAGAAGATCATGTTGAT
TCAAGAAATTGGATTAAAGAAAAAGATGATGAAGATCTTGTTGATGTATTGCTTCGAATT
CAAAAGGATCCAAACCGAGATGTACCTCTTCAAGATAGTCACATCAAGGGCCTTCTTGCG
GATATATTCATAGCAGGAACTGATACATCAGCAACAACCATAGAATGGATCATGGCAGAA
CTTATGTTAAATCCAAAAGTCATGAAAAAAGTTCAACAAGAAGTGAGACAAGTTGCTAAG
GGAAAACAAAAGGTCCAAGAAACTGATCTTTACAAACTTGAATACATGAAATTGGTCATA
AAAGAATCCCTTAGACTTCATCCACCAGCCCCATTACTAATCCCTCGAGTAACAACATCT
AGTTGCAAAATAATGGACTACGAAATCCCAGAAAATACAAGAGTCCTCATCAACGCGACA
GCAATTGGGACCGATCCAAAATACTGGGAAAATCCATTGACGTTTATACCAGAGAGATTC
TTGAATAAGGATATTGATTATAGAGGTCAAAATTATGAGTTTTTGCCATTTGGGGCAGGG
AGAAGAGGGTGTCCAGGAATTAATTTTTCTGTACCACTTGTTGAGCTTGCAATTGCTAAT
TTATTATTTCATTATGATTGGACACTACCTCAAGGGCTGAAAGCTAAGGATCTTGATATG
GAAGAAGCTTTGGGGATTACTATGCACAAGAAAATTCCCCTTTGCTTAGCAGCTTCTTAT
TATGACTTGTAA