Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078173
CDS Infomation

pacid=37449777 polypeptide=PGSC0003DMP400052927 locus=PGSC0003DMG400030410 ID=PGSC0003DMT400078173.v4.03 annot-version=v4.03
Sequence

ATGGGAAACGGTGTAGGAAAGCTTAGTGTTTGTTTCACTAGCGGCGGCGCCGTGGAGGGT
CGTCGCCGGAAAGATTTCCCTCTCATGATTTCTGACCCACTTGAAGATTTGGGTCATTCT
TTTTGTTATGTTCGACCCGATCAGACACGGATTTCATCTTCCAAAGTTCACTCAGAGGAA
ACCACAACTTTCCGGTCAATCTCCGGCGCCTCTGTTAGTGCCAACACTTCAACGCCGCTC
TCCACGGCGTTTGTCGATCTGTATTCTTACAATAGCATCGATCGGTCTTCGGCTTTTGAG
GGTTCTACTTCTTTTGCTTCTATACCCCTTCAACCTATTCCCAGAAACTCTTCAATTCAC
TCCGGCCCGCTTTTCACTTCGGGCCTTGTTCCGGCTTCGGGCCCGATGGAACGTGGGTTC
ATGTCCGGCCCTATTGAGAGGGGATTTCAATCGGGCCCGCTTGATCGTGGTCTTTATTCG
GGCCCTCTTGATAGGGGCTGTTCTGATCAGTTTCAGAGAAGCTATTCACATGGTTTTGCT
CTTCGATCTAGATCAAAAAAAGGGTCATTCTTTCGGGTTCTACAAAGAGCTATATCGAAG
ACCTTATCAAGAGGTCAAAATTCTATTGTTGCACCGATTAAAGGGTCAATTTCAGTAAAA
GAAGGTGATTGGGTTGTGGGTGCTGAAAAGCAGAACGAATTGACTATTAGCAGTGTGAAT
TTCAGCAGTGAGTGTAGTTTGGATGATGATGACACTTTAGATAATCAGAATCTTCAGTGG
GCTCAAGGGAAAGCCGGTGAAGATCGTGTTCATGTCGTAGTTTCTGAGGAACATGGTTGG
GTTTTTGTCGGGATTTATGATGGATTCAATGGTCCTGATGCACCTGATTTCTTGGTATCA
AATTTGTATCCAGCTGTTCACAAAGAGCTCAAAGGACTGTTATGGGATGACAAATTAGAT
AATAATTCCTCTGTTACGATCCCATCTCCGAGTTTAGCAGTGGAAGAATCTAATCAGACT
ATTGACGATGAATTCTCAAGGGATAGGCCTATTGATAGTTGTTCAAGATGTGTTGAGCAA
GAGAATTATCCTTCAGCGAGGGAGGATCTTTCATTCGATTCGCGGTTAAGGAAAAAGAGG
GGGAAGGGTTCAAAGAACAGGTACAGAGGAGTATCAAAGAAATGGGAAGAGAATCAGAGG
CGATGGCGATGCGAATGGGACAGGGAAAGATTAGAACTTGACAGGAGATTGAAGGAACAG
CTGAATGGAAATGGTTCAAATGGATCAGGATCAGTTAATCATGCTGATGTATTAAAAGCT
CTTTCTCAAGCATTGAAGAAAACAGAGGAGGCATATTTGGATCTAGCTGATAGGATGAAT
ATGGAGAATCCTGAATTGGCTTTGATGGGTTCTTGTGTTCTTGTTATGTTAATGAAAGGA
GAGGATGTTTATGTGATGAATGTAGGCGATAGTCGAGCCGTGTTAGCTCAGAAGAAAGAG
CCTAATCTGTGGAGTCAAGATTTGGAAAGGATCAATGAAGAAACATTGAAAGATCTTGAA
CTTTTCGATGGCGATGAGTCGGATTGTGTACCTAATTTAACTGCTTTCCAGCTTAGTATA
GATCATAGCACCTCTGTGGAAGAGGAAGTTCAAAGAATAAAAAGTGAACATCCAGATGAT
CCATGTGCCCTGATGAATGACCGTGTTAAAGGTTCATTGAAGGTTACTAGGGCTTTTGGT
GCTGGTTTCCTCAAACAGCCTAAATGGAACAATGCACTTCTTGAGATGTTCAGAATCGAC
TATATTGGAACTTCCCCCTACATCAGTTGTCTTCCATCGCTCTATCATCACAGGTTAGGG
CCAAGAGACAGGTTTTTGATACTGTCATCCGATGGGCTCTATCAGTACTTCACAAACGAA
GAAGCTGTATTAGAAGTCGAACATTTCATCTCATGGTCACCAGAAGGAGATCCAGCACAA
CATCTCATCGAGACAGTATTGTTTCGTGCTGCAAAAAAAGCTGGTATGGAGTTTCATGAG
TTGCTTGAAATACCACAAGGGGATCGACGTCGATACCATGATGATGTTTCAATAATTGTT
ATTTCTTTGGAGGGAAGAATATGGAGATCCAGTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052927
PEP Infomation

pacid=37449777 transcript=PGSC0003DMT400078173 locus=PGSC0003DMG400030410 ID=PGSC0003DMT400078173.v4.03 annot-version=v4.03
Sequence

MGNGVGKLSVCFTSGGAVEGRRRKDFPLMISDPLEDLGHSFCYVRPDQTRISSSKVHSEE
TTTFRSISGASVSANTSTPLSTAFVDLYSYNSIDRSSAFEGSTSFASIPLQPIPRNSSIH
SGPLFTSGLVPASGPMERGFMSGPIERGFQSGPLDRGLYSGPLDRGCSDQFQRSYSHGFA
LRSRSKKGSFFRVLQRAISKTLSRGQNSIVAPIKGSISVKEGDWVVGAEKQNELTISSVN
FSSECSLDDDDTLDNQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDFLVS
NLYPAVHKELKGLLWDDKLDNNSSVTIPSPSLAVEESNQTIDDEFSRDRPIDSCSRCVEQ
ENYPSAREDLSFDSRLRKKRGKGSKNRYRGVSKKWEENQRRWRCEWDRERLELDRRLKEQ
LNGNGSNGSGSVNHADVLKALSQALKKTEEAYLDLADRMNMENPELALMGSCVLVMLMKG
EDVYVMNVGDSRAVLAQKKEPNLWSQDLERINEETLKDLELFDGDESDCVPNLTAFQLSI
DHSTSVEEEVQRIKSEHPDDPCALMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRID
YIGTSPYISCLPSLYHHRLGPRDRFLILSSDGLYQYFTNEEAVLEVEHFISWSPEGDPAQ
HLIETVLFRAAKKAGMEFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400078173
Transcript Infomation

pacid=37449777 locus=PGSC0003DMG400030410 ID=PGSC0003DMT400078173.v4.03 annot-version=v4.03
Sequence

ATGGGAAACGGTGTAGGAAAGCTTAGTGTTTGTTTCACTAGCGGCGGCGCCGTGGAGGGT
CGTCGCCGGAAAGATTTCCCTCTCATGATTTCTGACCCACTTGAAGATTTGGGTCATTCT
TTTTGTTATGTTCGACCCGATCAGACACGGATTTCATCTTCCAAAGTTCACTCAGAGGAA
ACCACAACTTTCCGGTCAATCTCCGGCGCCTCTGTTAGTGCCAACACTTCAACGCCGCTC
TCCACGGCGTTTGTCGATCTGTATTCTTACAATAGCATCGATCGGTCTTCGGCTTTTGAG
GGTTCTACTTCTTTTGCTTCTATACCCCTTCAACCTATTCCCAGAAACTCTTCAATTCAC
TCCGGCCCGCTTTTCACTTCGGGCCTTGTTCCGGCTTCGGGCCCGATGGAACGTGGGTTC
ATGTCCGGCCCTATTGAGAGGGGATTTCAATCGGGCCCGCTTGATCGTGGTCTTTATTCG
GGCCCTCTTGATAGGGGCTGTTCTGATCAGTTTCAGAGAAGCTATTCACATGGTTTTGCT
CTTCGATCTAGATCAAAAAAAGGGTCATTCTTTCGGGTTCTACAAAGAGCTATATCGAAG
ACCTTATCAAGAGGTCAAAATTCTATTGTTGCACCGATTAAAGGGTCAATTTCAGTAAAA
GAAGGTGATTGGGTTGTGGGTGCTGAAAAGCAGAACGAATTGACTATTAGCAGTGTGAAT
TTCAGCAGTGAGTGTAGTTTGGATGATGATGACACTTTAGATAATCAGAATCTTCAGTGG
GCTCAAGGGAAAGCCGGTGAAGATCGTGTTCATGTCGTAGTTTCTGAGGAACATGGTTGG
GTTTTTGTCGGGATTTATGATGGATTCAATGGTCCTGATGCACCTGATTTCTTGGTATCA
AATTTGTATCCAGCTGTTCACAAAGAGCTCAAAGGACTGTTATGGGATGACAAATTAGAT
AATAATTCCTCTGTTACGATCCCATCTCCGAGTTTAGCAGTGGAAGAATCTAATCAGACT
ATTGACGATGAATTCTCAAGGGATAGGCCTATTGATAGTTGTTCAAGATGTGTTGAGCAA
GAGAATTATCCTTCAGCGAGGGAGGATCTTTCATTCGATTCGCGGTTAAGGAAAAAGAGG
GGGAAGGGTTCAAAGAACAGGTACAGAGGAGTATCAAAGAAATGGGAAGAGAATCAGAGG
CGATGGCGATGCGAATGGGACAGGGAAAGATTAGAACTTGACAGGAGATTGAAGGAACAG
CTGAATGGAAATGGTTCAAATGGATCAGGATCAGTTAATCATGCTGATGTATTAAAAGCT
CTTTCTCAAGCATTGAAGAAAACAGAGGAGGCATATTTGGATCTAGCTGATAGGATGAAT
ATGGAGAATCCTGAATTGGCTTTGATGGGTTCTTGTGTTCTTGTTATGTTAATGAAAGGA
GAGGATGTTTATGTGATGAATGTAGGCGATAGTCGAGCCGTGTTAGCTCAGAAGAAAGAG
CCTAATCTGTGGAGTCAAGATTTGGAAAGGATCAATGAAGAAACATTGAAAGATCTTGAA
CTTTTCGATGGCGATGAGTCGGATTGTGTACCTAATTTAACTGCTTTCCAGCTTAGTATA
GATCATAGCACCTCTGTGGAAGAGGAAGTTCAAAGAATAAAAAGTGAACATCCAGATGAT
CCATGTGCCCTGATGAATGACCGTGTTAAAGGTTCATTGAAGGTTACTAGGGCTTTTGGT
GCTGGTTTCCTCAAACAGCCTAAATGGAACAATGCACTTCTTGAGATGTTCAGAATCGAC
TATATTGGAACTTCCCCCTACATCAGTTGTCTTCCATCGCTCTATCATCACAGGTTAGGG
CCAAGAGACAGGTTTTTGATACTGTCATCCGATGGGCTCTATCAGTACTTCACAAACGAA
GAAGCTGTATTAGAAGTCGAACATTTCATCTCATGGTCACCAGAAGGAGATCCAGCACAA
CATCTCATCGAGACAGTATTGTTTCGTGCTGCAAAAAAAGCTGGTATGGAGTTTCATGAG
TTGCTTGAAATACCACAAGGGGATCGACGTCGATACCATGATGATGTTTCAATAATTGTT
ATTTCTTTGGAGGGAAGAATATGGAGATCCAGTGCATAA