Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078169
CDS Infomation

pacid=37449757 polypeptide=PGSC0003DMP400052923 locus=PGSC0003DMG400030407 ID=PGSC0003DMT400078169.v4.03 annot-version=v4.03
Sequence

ATGAATAAATTTCACCAAGTGACAACCCAGCTGGAACAAGCTTTGGGTGGAGTTCATTAT
GAAGAGCTTGACATATCTGATGAAGTTAAAGAGCAAGTAAAAGACATCACCTTATTACGT
CTTCATTTGTTGTCGATGGATACATCTCTTAATGTGCAATTCTTCTTTTCCATCTGTGGC
TCCAACTTCCAGGTAGAGCTTGTCCTTTCTCAGTTCCAAAGAGCCAAAGGAAGGGTTGAT
ACACCTGATGCTGAACTCCGTGAGGATCTATTGTCCCTTTACAGAAAGAGTAATGATCCT
GCTATAGATCCAGCTGTCCTGCGGAAATTGGTTAAGAAGTTACAGCTGACTGGATTATAT
GATCTCACACAAGAATCATGTGCTTTGCATGATATGGTCACTGCTACTGGTGAAGATCCA
GAGGAGAGGATCGAGAAGATGTCACTTGTACTGAGGAAAATTAAGGGGTTTGTGCTGACT
GAGACTCCGGAGATTGATTCTTCATCGAGGGAGAAGTCTTCAACTTGTAGTGGACAAGCA
TCTATCGAGGCAACTCATAAGGCCCCAGTTATACCAGATGATTTTCGGTGTCCTATATCC
CTGGAATTGATGAAAGATCCTGTCATTGTTTCATCTGGCCAGACTTACGAGCGTTCTTCT
ATTGAGAAGTGGCTGGAAGCAGGGCATAGCACTTGTCCCAAGACACAACAAGTCCTCACA
AGCAATGTTGTCACACCAAACTATGTGTTGCGGAGCCTCATAGCACAGTGGTGTGAAATG
AATGGAGTTGAATCACCCAAACGACCAGGTAGTTCACCCAATAAATCAACATCCGCGTGC
ACACCTGCTGAGCACTCGACTATAGAAAATCTCCTGAGAAAGCTCACATCTGGCAGCCCT
GAAGATCGTCTCTCAGCCACAGGTGAAATCCGCCTGCTTGCTAAACGCAATGCTGATAAT
CGTGTTGCAATAGCTGAAGCAGGTGCTATTCCTCTGCTCGTTGACCTTCTGTCCACACCC
GATTCTCGGATCCAAGAGCATGCTGTTACAGCACTACTTAACCTCTCTATCTGTGAGGAT
AACAAACGGAGCATTGTAACATCAGGGGCAGTGCCTGGTATCGTCCATGTGCTTAAGAAG
GGGAGCATGGAAGCACGTGAAAATGCAGCGGCCGCGCTATTTAGCCTTTCAGTTATAGAT
GAGAATAAGGTCATAATTGGTACTTTTGGGGCAATACCTCCACTTGTAACATTATTAAGT
GATGGCACCCAGAGAGGGAAGAAAGACGCTGCTACCGCACTTTTCAATCTGTGCATTTAT
CAAGGGAACAAGGGCAAGGCAGTAAGGGCTGGAGTTGTGGTCACTCTAATGGGGCTGCTT
ATGGAACCTCAAGGTGGTATGATTGATGAAGCACTTGCCATTTTAGCGATATTGTCTAGT
CATCCAGAAGGGAAGACAACCATTGGAGCTGCAGGGGCAGTTCCTGTTTTGGTAAATGTG
ATCACAAATGGGTCTCCCAGAAACAAAGAAAATGCAGCTGCAGTTTTGGTACACCTTTGC
TCTGGGGACCAACACCATCTAGTGGATGTTCAGGAGCTAGGAATAATGGGACCATTGGTG
GATTTAGTACAAAATGGCACTGAAAGGGGTAGACGAAAAGCAACCCAGTTGCTTGAACGA
ATAAACAGATATGCTGAGCAGCAAAAACAGGCCCAGACAGAACCCGAGGCTCCGATTCAT
AACCAGCTTTCACAGTCACCACCATCATCGACAGATGTCCTGGAATGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052923
PEP Infomation

pacid=37449757 transcript=PGSC0003DMT400078169 locus=PGSC0003DMG400030407 ID=PGSC0003DMT400078169.v4.03 annot-version=v4.03
Sequence

MNKFHQVTTQLEQALGGVHYEELDISDEVKEQVKDITLLRLHLLSMDTSLNVQFFFSICG
SNFQVELVLSQFQRAKGRVDTPDAELREDLLSLYRKSNDPAIDPAVLRKLVKKLQLTGLY
DLTQESCALHDMVTATGEDPEERIEKMSLVLRKIKGFVLTETPEIDSSSREKSSTCSGQA
SIEATHKAPVIPDDFRCPISLELMKDPVIVSSGQTYERSSIEKWLEAGHSTCPKTQQVLT
SNVVTPNYVLRSLIAQWCEMNGVESPKRPGSSPNKSTSACTPAEHSTIENLLRKLTSGSP
EDRLSATGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRIQEHAVTALLNLSICED
NKRSIVTSGAVPGIVHVLKKGSMEARENAAAALFSLSVIDENKVIIGTFGAIPPLVTLLS
DGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVVTLMGLLMEPQGGMIDEALAILAILSS
HPEGKTTIGAAGAVPVLVNVITNGSPRNKENAAAVLVHLCSGDQHHLVDVQELGIMGPLV
DLVQNGTERGRRKATQLLERINRYAEQQKQAQTEPEAPIHNQLSQSPPSSTDVLEC*

Transcript Sequence

Transcript ID

PGSC0003DMT400078169
Transcript Infomation

pacid=37449757 locus=PGSC0003DMG400030407 ID=PGSC0003DMT400078169.v4.03 annot-version=v4.03
Sequence

ATGAATAAATTTCACCAAGTGACAACCCAGCTGGAACAAGCTTTGGGTGGAGTTCATTAT
GAAGAGCTTGACATATCTGATGAAGTTAAAGAGCAAGTAAAAGACATCACCTTATTACGT
CTTCATTTGTTGTCGATGGATACATCTCTTAATGTGCAATTCTTCTTTTCCATCTGTGGC
TCCAACTTCCAGGTAGAGCTTGTCCTTTCTCAGTTCCAAAGAGCCAAAGGAAGGGTTGAT
ACACCTGATGCTGAACTCCGTGAGGATCTATTGTCCCTTTACAGAAAGAGTAATGATCCT
GCTATAGATCCAGCTGTCCTGCGGAAATTGGTTAAGAAGTTACAGCTGACTGGATTATAT
GATCTCACACAAGAATCATGTGCTTTGCATGATATGGTCACTGCTACTGGTGAAGATCCA
GAGGAGAGGATCGAGAAGATGTCACTTGTACTGAGGAAAATTAAGGGGTTTGTGCTGACT
GAGACTCCGGAGATTGATTCTTCATCGAGGGAGAAGTCTTCAACTTGTAGTGGACAAGCA
TCTATCGAGGCAACTCATAAGGCCCCAGTTATACCAGATGATTTTCGGTGTCCTATATCC
CTGGAATTGATGAAAGATCCTGTCATTGTTTCATCTGGCCAGACTTACGAGCGTTCTTCT
ATTGAGAAGTGGCTGGAAGCAGGGCATAGCACTTGTCCCAAGACACAACAAGTCCTCACA
AGCAATGTTGTCACACCAAACTATGTGTTGCGGAGCCTCATAGCACAGTGGTGTGAAATG
AATGGAGTTGAATCACCCAAACGACCAGGTAGTTCACCCAATAAATCAACATCCGCGTGC
ACACCTGCTGAGCACTCGACTATAGAAAATCTCCTGAGAAAGCTCACATCTGGCAGCCCT
GAAGATCGTCTCTCAGCCACAGGTGAAATCCGCCTGCTTGCTAAACGCAATGCTGATAAT
CGTGTTGCAATAGCTGAAGCAGGTGCTATTCCTCTGCTCGTTGACCTTCTGTCCACACCC
GATTCTCGGATCCAAGAGCATGCTGTTACAGCACTACTTAACCTCTCTATCTGTGAGGAT
AACAAACGGAGCATTGTAACATCAGGGGCAGTGCCTGGTATCGTCCATGTGCTTAAGAAG
GGGAGCATGGAAGCACGTGAAAATGCAGCGGCCGCGCTATTTAGCCTTTCAGTTATAGAT
GAGAATAAGGTCATAATTGGTACTTTTGGGGCAATACCTCCACTTGTAACATTATTAAGT
GATGGCACCCAGAGAGGGAAGAAAGACGCTGCTACCGCACTTTTCAATCTGTGCATTTAT
CAAGGGAACAAGGGCAAGGCAGTAAGGGCTGGAGTTGTGGTCACTCTAATGGGGCTGCTT
ATGGAACCTCAAGGTGGTATGATTGATGAAGCACTTGCCATTTTAGCGATATTGTCTAGT
CATCCAGAAGGGAAGACAACCATTGGAGCTGCAGGGGCAGTTCCTGTTTTGGTAAATGTG
ATCACAAATGGGTCTCCCAGAAACAAAGAAAATGCAGCTGCAGTTTTGGTACACCTTTGC
TCTGGGGACCAACACCATCTAGTGGATGTTCAGGAGCTAGGAATAATGGGACCATTGGTG
GATTTAGTACAAAATGGCACTGAAAGGGGTAGACGAAAAGCAACCCAGTTGCTTGAACGA
ATAAACAGATATGCTGAGCAGCAAAAACAGGCCCAGACAGAACCCGAGGCTCCGATTCAT
AACCAGCTTTCACAGTCACCACCATCATCGACAGATGTCCTGGAATGCTGA