Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078161
CDS Infomation

pacid=37452761 polypeptide=PGSC0003DMP400052915 locus=PGSC0003DMG400030404 ID=PGSC0003DMT400078161.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTCCTTTAATCCCACCCCTGGGACAAAGTCTATGGTCACAACTGCTATCACT
ACCAAAAATGAATCTAAACAACACATCATTTCTTCTGGATCGAACTCTTTTGAAAATGTA
AGACGGTTTGATCTGATAAAATATGGGAAGCAGAGAAGAGGAAGTGGTAATCAGTTAGTT
TTCTTTCTGGTTAAAGTTGCTGCCTTGGAGGCTGTGCGGAGGATCTCACGGTCCAAATGT
CCATTTGTATGGTCTGGCTTACAAGCTCTGCAAGTTGTGTGCTACCCGCCACTTAAGTGG
ATGCAAAGGTGGAATCCTTTTAGGGTTCTGGTTGAAGGCATGCAGATGTTATCGCGGCCA
CTGCTAGTGCTATCTATCGCTACAGCATTTTCTGATCATTCAGAATTCAATAATGATACC
TCAGATAGCACTCAAGGTTCCCCGGTATCCAGTGATTTGCATGCTGATTCAGACTCCCAG
CTAGAAGTCTCTTCTGAGCAGTCTATCCCAAAAGAAAGGGTTGGCAATGAAGTTTCTCAA
AGTCTGTCTTCCACTAGTTCCGCAAGTTGGTTGCATCTTCTTTACAAAGATCTGGAAAAG
CAAGGAATTATCTTGCCAGAGAGAATTGATGAAGAGGAACTCCATCAATTTTTCACAGCT
GCAGATGGAGATTTTACTCGCTTACTTTCTTCACTGAAGAAAACAATTCGCTGGAGGGAG
ACATACAGAATTCTTTCCAGACAAGAACTTGAAGTGTGGTCAAATATGGTCTTTTGGCAT
GGATATGATGTGCAGAATCGACCCTGCCTCATTGTCCGTCTTGGCTTAGCGTGCATCAGC
TTGCCATCTCGTGATAGACCTAGCTTTGCTCAAGCAGTTGTATCTCAGGTGGAGCATGGG
GTTCTTCATTTGGTGGACCCACAAAATTCTCAAATTACTGTTTTGGTAGACTGTGAAGGA
CTATCTCCACTGAGACTTCCCATGCAAATGCTGAGATCCTGTTCCACTCTTTTACAAGAT
CACTTCCCCAACCGTCTGGGCTGTTTATTCATTATACGCCTTCCATCTATTGTTCGAGTT
GTCGCACAAACCTTTGTGCAAGTTTTCAAACCAGTCACTCGGCAAAAATTGAGATTTGAA
GGGGAAATGTACCAAAAGGTTCTTTCTGAGTGTTTGCAAACACTCCCGTCTTATCTTGGT
GGGCAGTGCACATGCTCAAGATGTGCAAGCTTTGACATGAGCAAGACGCATAACACTCGC
ATGAATGACGACCATCAAGAGACAGCGGTAAGCGAGATTATTAACAATCCACTGGATCTA
GCACCACTCCATTCAGGTGAACATACTGAAATTCCGACGAATTATAACTGTGAGCGGGTC
CTAAGAAAGGCTGTGGTGGGTATCCTTTTGTTCTGGGTTATTATTGTTTTAATTGCTGGA
ATATTTGATCCAGAAAATCGTCCCATTTTACCTCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052915
PEP Infomation

pacid=37452761 transcript=PGSC0003DMT400078161 locus=PGSC0003DMG400030404 ID=PGSC0003DMT400078161.v4.03 annot-version=v4.03
Sequence

MGDSFNPTPGTKSMVTTAITTKNESKQHIISSGSNSFENVRRFDLIKYGKQRRGSGNQLV
FFLVKVAALEAVRRISRSKCPFVWSGLQALQVVCYPPLKWMQRWNPFRVLVEGMQMLSRP
LLVLSIATAFSDHSEFNNDTSDSTQGSPVSSDLHADSDSQLEVSSEQSIPKERVGNEVSQ
SLSSTSSASWLHLLYKDLEKQGIILPERIDEEELHQFFTAADGDFTRLLSSLKKTIRWRE
TYRILSRQELEVWSNMVFWHGYDVQNRPCLIVRLGLACISLPSRDRPSFAQAVVSQVEHG
VLHLVDPQNSQITVLVDCEGLSPLRLPMQMLRSCSTLLQDHFPNRLGCLFIIRLPSIVRV
VAQTFVQVFKPVTRQKLRFEGEMYQKVLSECLQTLPSYLGGQCTCSRCASFDMSKTHNTR
MNDDHQETAVSEIINNPLDLAPLHSGEHTEIPTNYNCERVLRKAVVGILLFWVIIVLIAG
IFDPENRPILPP*

Transcript Sequence

Transcript ID

PGSC0003DMT400078161
Transcript Infomation

pacid=37452761 locus=PGSC0003DMG400030404 ID=PGSC0003DMT400078161.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTCCTTTAATCCCACCCCTGGGACAAAGTCTATGGTCACAACTGCTATCACT
ACCAAAAATGAATCTAAACAACACATCATTTCTTCTGGATCGAACTCTTTTGAAAATGTA
AGACGGTTTGATCTGATAAAATATGGGAAGCAGAGAAGAGGAAGTGGTAATCAGTTAGTT
TTCTTTCTGGTTAAAGTTGCTGCCTTGGAGGCTGTGCGGAGGATCTCACGGTCCAAATGT
CCATTTGTATGGTCTGGCTTACAAGCTCTGCAAGTTGTGTGCTACCCGCCACTTAAGTGG
ATGCAAAGGTGGAATCCTTTTAGGGTTCTGGTTGAAGGCATGCAGATGTTATCGCGGCCA
CTGCTAGTGCTATCTATCGCTACAGCATTTTCTGATCATTCAGAATTCAATAATGATACC
TCAGATAGCACTCAAGGTTCCCCGGTATCCAGTGATTTGCATGCTGATTCAGACTCCCAG
CTAGAAGTCTCTTCTGAGCAGTCTATCCCAAAAGAAAGGGTTGGCAATGAAGTTTCTCAA
AGTCTGTCTTCCACTAGTTCCGCAAGTTGGTTGCATCTTCTTTACAAAGATCTGGAAAAG
CAAGGAATTATCTTGCCAGAGAGAATTGATGAAGAGGAACTCCATCAATTTTTCACAGCT
GCAGATGGAGATTTTACTCGCTTACTTTCTTCACTGAAGAAAACAATTCGCTGGAGGGAG
ACATACAGAATTCTTTCCAGACAAGAACTTGAAGTGTGGTCAAATATGGTCTTTTGGCAT
GGATATGATGTGCAGAATCGACCCTGCCTCATTGTCCGTCTTGGCTTAGCGTGCATCAGC
TTGCCATCTCGTGATAGACCTAGCTTTGCTCAAGCAGTTGTATCTCAGGTGGAGCATGGG
GTTCTTCATTTGGTGGACCCACAAAATTCTCAAATTACTGTTTTGGTAGACTGTGAAGGA
CTATCTCCACTGAGACTTCCCATGCAAATGCTGAGATCCTGTTCCACTCTTTTACAAGAT
CACTTCCCCAACCGTCTGGGCTGTTTATTCATTATACGCCTTCCATCTATTGTTCGAGTT
GTCGCACAAACCTTTGTGCAAGTTTTCAAACCAGTCACTCGGCAAAAATTGAGATTTGAA
GGGGAAATGTACCAAAAGGTTCTTTCTGAGTGTTTGCAAACACTCCCGTCTTATCTTGGT
GGGCAGTGCACATGCTCAAGATGTGCAAGCTTTGACATGAGCAAGACGCATAACACTCGC
ATGAATGACGACCATCAAGAGACAGCGGTAAGCGAGATTATTAACAATCCACTGGATCTA
GCACCACTCCATTCAGGTGAACATACTGAAATTCCGACGAATTATAACTGTGAGCGGGTC
CTAAGAAAGGCTGTGGTGGGTATCCTTTTGTTCTGGGTTATTATTGTTTTAATTGCTGGA
ATATTTGATCCAGAAAATCGTCCCATTTTACCTCCTTGA