Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078145
CDS Infomation

pacid=37450366 polypeptide=PGSC0003DMP400052901 locus=PGSC0003DMG400030394 ID=PGSC0003DMT400078145.v4.03 annot-version=v4.03
Sequence

ATGACTGGGTTCTTCTCTTTATCAAAACATTCATCCCCTCTACATGCTTCTTCACAATCC
ACACATCATAAATTCAGTGACACTTTAATGGAGGATACATTAAAGAACGCTGAAGAAATT
ATTAAAAGATGGGATCTTGATGAGTCCAGTTCAAATCTCTTTCAAGATAATAGAACAGAG
GCTAAGCAGTTTCTGGATGCTGTAATTGATTTACAACATGCTATGCAGTTTGTTGTAAAG
GAAAGTTCCACCTCCCAATTGCTTGTTCGAGCTCAAAATCTAATGAAAATCGCCATGAAG
AGACTTCAGAAGGAGTTCTACACCATTTTGGCCGGAAATCGATACTTTCTTGACTCGGAA
AGTGGGTCAAGAGAATCCACCCGGTACAGCGGTTCGGATGAAGATCAAGGTTCTGAAGAT
GATAATGCTGAAATTGAAGCTCGTTTTGCTGAGATTTCAATTACCGATGAAGGTGAAAAA
GTTTCTGTAGCTGTGGATCTGAAAGCTATTGCTGATTGTATGATTGAAGCAGGGTATGGA
AAAGAATGCTCCAAGATTTACGAACTTAATCGAAAATCTGTCATCGAAGAGACATTGTAT
TACTTGGGGGTTGAAAATATTTGCCCTTCAACGGTTCAGAAAATGGATTGGAAAGATTTG
GAGAAGAAAATCAAGATCTGGTTGAATGCTGTTAAAGTTGCTGTTAGTACTCTGTTTTAC
GGCGAGAGGATTCTCTGTGACCAAGTTTTCTCCATCTCCGATAGCATCAGAGAGTCTTGT
TTCACAGGGATTGCAAAAGACAGTGCTCTAACTCTGTTCACTTTCCCGGAGATGGTGGCG
AAATACAAGAAGCTATCTCTAGAGAAAATGTTCCGTATTCTCGACCTTTACGACTCTATT
TCTGAACTCTTGAGTGAAATTGAAGTGATTTTCGGCTTCGATTCTACGGTTGCTGTTAAA
TCTCAGGCGCTGACCTCCATGGCCAAGCTCCGAGATGCTGCTCGAGCCATGCTGGCGGAG
TTCGAATCGGCGATTAAGAAAGATTCATCTAAAGTAGTGGCTGGTGGCGGAATCCACCCT
CTAACACGCTACGTTATGAACTACCTTATTTTCCTCAGCGATTACAGTGGACCCGTCTCC
GATATTATCGCCGATTGGAAGGCAGTGGTAAAGTCACCGTTGCCGGAATCTTACCTCTTG
AGTCCAATCGCCGACGACGGGGAATCACCGTCTTGTATCGTTTCCGTACGACTCACATGG
CTTATCCTCGTTCTCCTCTGCAAACTCGACGGCAAAGCAGGGTTCTACGGTGACGTTCCG
TTATCCTATTTGTTCTTAGCAAACAACCTAAACTACGTCGTTTCGAAGGTCCGACAATCC
AGCCTGAAGCTTCTATTAGGACCCGATTGGCTTTCAAACCACGAATCTAAGGTAGAACAA
TACATGGCGAATTTCAAGAGAATGGGTTGGAGCAGTGTGATGACGTCACTTCCGGAGAAT
TCAACGGCTGAGATTTCTCCGGCGGAAGCAAAGGAATGTTTCTGTAAATTCAGTTTAAGT
TTCGAAGAGACATACTGGAAGCAAAGATCATGGGTTATACCCGACCCGAAACTCCGTGAT
GAAGTGAAAATATCATTGGCGAAGAAGATCCTTTCGGCTTATCGGCCATTTTACCACAAG
TACGGTGAAAAGGTGGCGTGGATGGAGAGTGGTGGCGGAGTGGAGTCAATTCTCAGATTT
GCCCCTGACAATGTGCAAAATTACTTATCCGATTTATTTCACGGTTCTTCAGAAAACTCC
AGTACGACGTCGTCATCGCATGGGTCATCTTCACGGTCGACCCCAACGTGGTCATCGCCA
CCACAAGGCCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052901
PEP Infomation

pacid=37450366 transcript=PGSC0003DMT400078145 locus=PGSC0003DMG400030394 ID=PGSC0003DMT400078145.v4.03 annot-version=v4.03
Sequence

MTGFFSLSKHSSPLHASSQSTHHKFSDTLMEDTLKNAEEIIKRWDLDESSSNLFQDNRTE
AKQFLDAVIDLQHAMQFVVKESSTSQLLVRAQNLMKIAMKRLQKEFYTILAGNRYFLDSE
SGSRESTRYSGSDEDQGSEDDNAEIEARFAEISITDEGEKVSVAVDLKAIADCMIEAGYG
KECSKIYELNRKSVIEETLYYLGVENICPSTVQKMDWKDLEKKIKIWLNAVKVAVSTLFY
GERILCDQVFSISDSIRESCFTGIAKDSALTLFTFPEMVAKYKKLSLEKMFRILDLYDSI
SELLSEIEVIFGFDSTVAVKSQALTSMAKLRDAARAMLAEFESAIKKDSSKVVAGGGIHP
LTRYVMNYLIFLSDYSGPVSDIIADWKAVVKSPLPESYLLSPIADDGESPSCIVSVRLTW
LILVLLCKLDGKAGFYGDVPLSYLFLANNLNYVVSKVRQSSLKLLLGPDWLSNHESKVEQ
YMANFKRMGWSSVMTSLPENSTAEISPAEAKECFCKFSLSFEETYWKQRSWVIPDPKLRD
EVKISLAKKILSAYRPFYHKYGEKVAWMESGGGVESILRFAPDNVQNYLSDLFHGSSENS
STTSSSHGSSSRSTPTWSSPPQGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400078145
Transcript Infomation

pacid=37450366 locus=PGSC0003DMG400030394 ID=PGSC0003DMT400078145.v4.03 annot-version=v4.03
Sequence

ATGACTGGGTTCTTCTCTTTATCAAAACATTCATCCCCTCTACATGCTTCTTCACAATCC
ACACATCATAAATTCAGTGACACTTTAATGGAGGATACATTAAAGAACGCTGAAGAAATT
ATTAAAAGATGGGATCTTGATGAGTCCAGTTCAAATCTCTTTCAAGATAATAGAACAGAG
GCTAAGCAGTTTCTGGATGCTGTAATTGATTTACAACATGCTATGCAGTTTGTTGTAAAG
GAAAGTTCCACCTCCCAATTGCTTGTTCGAGCTCAAAATCTAATGAAAATCGCCATGAAG
AGACTTCAGAAGGAGTTCTACACCATTTTGGCCGGAAATCGATACTTTCTTGACTCGGAA
AGTGGGTCAAGAGAATCCACCCGGTACAGCGGTTCGGATGAAGATCAAGGTTCTGAAGAT
GATAATGCTGAAATTGAAGCTCGTTTTGCTGAGATTTCAATTACCGATGAAGGTGAAAAA
GTTTCTGTAGCTGTGGATCTGAAAGCTATTGCTGATTGTATGATTGAAGCAGGGTATGGA
AAAGAATGCTCCAAGATTTACGAACTTAATCGAAAATCTGTCATCGAAGAGACATTGTAT
TACTTGGGGGTTGAAAATATTTGCCCTTCAACGGTTCAGAAAATGGATTGGAAAGATTTG
GAGAAGAAAATCAAGATCTGGTTGAATGCTGTTAAAGTTGCTGTTAGTACTCTGTTTTAC
GGCGAGAGGATTCTCTGTGACCAAGTTTTCTCCATCTCCGATAGCATCAGAGAGTCTTGT
TTCACAGGGATTGCAAAAGACAGTGCTCTAACTCTGTTCACTTTCCCGGAGATGGTGGCG
AAATACAAGAAGCTATCTCTAGAGAAAATGTTCCGTATTCTCGACCTTTACGACTCTATT
TCTGAACTCTTGAGTGAAATTGAAGTGATTTTCGGCTTCGATTCTACGGTTGCTGTTAAA
TCTCAGGCGCTGACCTCCATGGCCAAGCTCCGAGATGCTGCTCGAGCCATGCTGGCGGAG
TTCGAATCGGCGATTAAGAAAGATTCATCTAAAGTAGTGGCTGGTGGCGGAATCCACCCT
CTAACACGCTACGTTATGAACTACCTTATTTTCCTCAGCGATTACAGTGGACCCGTCTCC
GATATTATCGCCGATTGGAAGGCAGTGGTAAAGTCACCGTTGCCGGAATCTTACCTCTTG
AGTCCAATCGCCGACGACGGGGAATCACCGTCTTGTATCGTTTCCGTACGACTCACATGG
CTTATCCTCGTTCTCCTCTGCAAACTCGACGGCAAAGCAGGGTTCTACGGTGACGTTCCG
TTATCCTATTTGTTCTTAGCAAACAACCTAAACTACGTCGTTTCGAAGGTCCGACAATCC
AGCCTGAAGCTTCTATTAGGACCCGATTGGCTTTCAAACCACGAATCTAAGGTAGAACAA
TACATGGCGAATTTCAAGAGAATGGGTTGGAGCAGTGTGATGACGTCACTTCCGGAGAAT
TCAACGGCTGAGATTTCTCCGGCGGAAGCAAAGGAATGTTTCTGTAAATTCAGTTTAAGT
TTCGAAGAGACATACTGGAAGCAAAGATCATGGGTTATACCCGACCCGAAACTCCGTGAT
GAAGTGAAAATATCATTGGCGAAGAAGATCCTTTCGGCTTATCGGCCATTTTACCACAAG
TACGGTGAAAAGGTGGCGTGGATGGAGAGTGGTGGCGGAGTGGAGTCAATTCTCAGATTT
GCCCCTGACAATGTGCAAAATTACTTATCCGATTTATTTCACGGTTCTTCAGAAAACTCC
AGTACGACGTCGTCATCGCATGGGTCATCTTCACGGTCGACCCCAACGTGGTCATCGCCA
CCACAAGGCCGTTGA