Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078144
CDS Infomation

pacid=37450262 polypeptide=PGSC0003DMP400052900 locus=PGSC0003DMG400030393 ID=PGSC0003DMT400078144.v4.03 annot-version=v4.03
Sequence

ATGGAGGCATCCATGCCCCCTAAAAGGATGAAGAAGCAACTAACGGGGAAACGTGAAGAC
AGTGTCTTGCATAGATTGGCTAGAGCTGGAAATCTTGTTGAAATAAGAGGGATTATCGAT
AACACAGGGGAGAAAGAATTGACAGAGCTGTTGGTAAAGCAAAATTCAGCTGGAGAGACT
TCTTTATATGTTGCAGCAGAATATGGTTATTGTGATTTAGTTAAGGAGATGATTAAGTAC
TATGATCTTGCTGCTGCTGGAATCAAAGCAAGGAACGGATTTGATGCGTTGCATATTGCT
GCTAAACAAGGGGATTTGGATGTGGTGAAGGTACTAATGATGGTACATCCTGAGCTCTCA
ATGACTGTTGATGTTGCAAATACAACAGCTTTGCATAGTGCAGCAAACCAAGGGCATATT
CAGATGGTGAATTATTTATTGGAGGCAGAGAGTAGTTTGGCCACTATTGCTAAAAGTAAT
GGAAAAACAGCCCTGCATTCTGCTTCAAGAAATGGTCATGTGGAAGTAGTGAAGGCCCTT
TTGTATAAGGAGCCAAGGATGGCAAGCCGGACGGATAAAAAGGGGCAAACTGCACTTCAC
ATGGCTGTCAAAGGACAAAACCTTGAAGTTGTGGAGGAGCTGATTAGAGCAGATGCTAAG
TTGATAAATATCATTGACACGAAGGGCAATACAGCATTGCATATTGCATCCCGGAAAGGA
AGGGCTCAGATTGTTAAGTTTTTACTTGGGCAGAACGAGACGGATACCAAAGCTGTCAAT
AGATCAAAGGAAACAGCTCTTGACACTGCAGAGAAAATGGGACAGGCAAATATTGCAGTC
ATCCTACAGGAAGCTGGTGTACAAAGCGCCCGAGCCATCAAGCCTCAGACTACAAATCCA
GCAAGACAGTTGAAACAAACAGTTAGTGACATAAAACACGAAGTACACTATCAAATGGAA
CACACGCGACAGACAAGAAAACGGATACATGGCATTGCTAAACGCCTAGATAAAATGCAC
GCTGAAGGCCTTAACAACGCCATCAATTCTACCACAGTTGTAGCTGTACTAATCGCCACA
GTTGCCTTTGCAGCAATTTTCTCTGTTCCAGGCCAATACATTGAGTATCCAGAAGATGTC
CCACCAGGCCATTCCCTTGGAGAAGCAAATATAGCTCCAACTCCCTCATTCCTGATATTC
CTCGTCTTCGACTCCTTTGCCCTTTTTATATCTCTGGCAGTTGTGGTTGTTCAGACATCA
ATCGTGGTAATCGAAAGCAAAGCAAAGAAGCAAATGATGGCAATCATAAACAAGCTAATG
TGGTTAGCATGTGTGCTAATTTCAGTGGCATTCTTGGCTCTGTCTTATGTTGTGGTTGGC
AAAAATGAGAAGTGGCTGGCTATTGTAGTGACTATTATAGGAACAGCTATATTAGTTACA
ACACTAGGGACTATGTGTTACTGGGTCATAATGCATCGAATAGAGTCATCGAACAAGAGG
ACCATTCGAAAGAACTCTCTGGCCAGTAGGTCCTTGTCCTGGTCAGCATCAGTAGTCTCT
GATTCAGATGTTCTAAACAATAAAAACAAGAAAATGTATGCTATATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052900
PEP Infomation

pacid=37450262 transcript=PGSC0003DMT400078144 locus=PGSC0003DMG400030393 ID=PGSC0003DMT400078144.v4.03 annot-version=v4.03
Sequence

MEASMPPKRMKKQLTGKREDSVLHRLARAGNLVEIRGIIDNTGEKELTELLVKQNSAGET
SLYVAAEYGYCDLVKEMIKYYDLAAAGIKARNGFDALHIAAKQGDLDVVKVLMMVHPELS
MTVDVANTTALHSAANQGHIQMVNYLLEAESSLATIAKSNGKTALHSASRNGHVEVVKAL
LYKEPRMASRTDKKGQTALHMAVKGQNLEVVEELIRADAKLINIIDTKGNTALHIASRKG
RAQIVKFLLGQNETDTKAVNRSKETALDTAEKMGQANIAVILQEAGVQSARAIKPQTTNP
ARQLKQTVSDIKHEVHYQMEHTRQTRKRIHGIAKRLDKMHAEGLNNAINSTTVVAVLIAT
VAFAAIFSVPGQYIEYPEDVPPGHSLGEANIAPTPSFLIFLVFDSFALFISLAVVVVQTS
IVVIESKAKKQMMAIINKLMWLACVLISVAFLALSYVVVGKNEKWLAIVVTIIGTAILVT
TLGTMCYWVIMHRIESSNKRTIRKNSLASRSLSWSASVVSDSDVLNNKNKKMYAI*

Transcript Sequence

Transcript ID

PGSC0003DMT400078144
Transcript Infomation

pacid=37450262 locus=PGSC0003DMG400030393 ID=PGSC0003DMT400078144.v4.03 annot-version=v4.03
Sequence

ATGGAGGCATCCATGCCCCCTAAAAGGATGAAGAAGCAACTAACGGGGAAACGTGAAGAC
AGTGTCTTGCATAGATTGGCTAGAGCTGGAAATCTTGTTGAAATAAGAGGGATTATCGAT
AACACAGGGGAGAAAGAATTGACAGAGCTGTTGGTAAAGCAAAATTCAGCTGGAGAGACT
TCTTTATATGTTGCAGCAGAATATGGTTATTGTGATTTAGTTAAGGAGATGATTAAGTAC
TATGATCTTGCTGCTGCTGGAATCAAAGCAAGGAACGGATTTGATGCGTTGCATATTGCT
GCTAAACAAGGGGATTTGGATGTGGTGAAGGTACTAATGATGGTACATCCTGAGCTCTCA
ATGACTGTTGATGTTGCAAATACAACAGCTTTGCATAGTGCAGCAAACCAAGGGCATATT
CAGATGGTGAATTATTTATTGGAGGCAGAGAGTAGTTTGGCCACTATTGCTAAAAGTAAT
GGAAAAACAGCCCTGCATTCTGCTTCAAGAAATGGTCATGTGGAAGTAGTGAAGGCCCTT
TTGTATAAGGAGCCAAGGATGGCAAGCCGGACGGATAAAAAGGGGCAAACTGCACTTCAC
ATGGCTGTCAAAGGACAAAACCTTGAAGTTGTGGAGGAGCTGATTAGAGCAGATGCTAAG
TTGATAAATATCATTGACACGAAGGGCAATACAGCATTGCATATTGCATCCCGGAAAGGA
AGGGCTCAGATTGTTAAGTTTTTACTTGGGCAGAACGAGACGGATACCAAAGCTGTCAAT
AGATCAAAGGAAACAGCTCTTGACACTGCAGAGAAAATGGGACAGGCAAATATTGCAGTC
ATCCTACAGGAAGCTGGTGTACAAAGCGCCCGAGCCATCAAGCCTCAGACTACAAATCCA
GCAAGACAGTTGAAACAAACAGTTAGTGACATAAAACACGAAGTACACTATCAAATGGAA
CACACGCGACAGACAAGAAAACGGATACATGGCATTGCTAAACGCCTAGATAAAATGCAC
GCTGAAGGCCTTAACAACGCCATCAATTCTACCACAGTTGTAGCTGTACTAATCGCCACA
GTTGCCTTTGCAGCAATTTTCTCTGTTCCAGGCCAATACATTGAGTATCCAGAAGATGTC
CCACCAGGCCATTCCCTTGGAGAAGCAAATATAGCTCCAACTCCCTCATTCCTGATATTC
CTCGTCTTCGACTCCTTTGCCCTTTTTATATCTCTGGCAGTTGTGGTTGTTCAGACATCA
ATCGTGGTAATCGAAAGCAAAGCAAAGAAGCAAATGATGGCAATCATAAACAAGCTAATG
TGGTTAGCATGTGTGCTAATTTCAGTGGCATTCTTGGCTCTGTCTTATGTTGTGGTTGGC
AAAAATGAGAAGTGGCTGGCTATTGTAGTGACTATTATAGGAACAGCTATATTAGTTACA
ACACTAGGGACTATGTGTTACTGGGTCATAATGCATCGAATAGAGTCATCGAACAAGAGG
ACCATTCGAAAGAACTCTCTGGCCAGTAGGTCCTTGTCCTGGTCAGCATCAGTAGTCTCT
GATTCAGATGTTCTAAACAATAAAAACAAGAAAATGTATGCTATATAA