Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078138
CDS Infomation

pacid=37450863 polypeptide=PGSC0003DMP400052898 locus=PGSC0003DMG400030390 ID=PGSC0003DMT400078138.v4.03 annot-version=v4.03
Sequence

ATGGTGCCCATTGACGATGGGGATTTATCTAGAGACAATTCAGTGAAATGGATTCTTGAA
AATGCTGAAAAAGATAGTACGAGCGATGTCCATGAGAATATAAATGGTGCAAATGGTTTA
CAAGAAGAGCTTGCAAATCAAAAATCTTTCAAGAGAAATTTCAGCATTTCAAGACGAAGA
AATGGCGTTGTACCAAGAATGGGGCGGATGGAATCAGGAGCTACTAGAGGGCTCAAGAGC
TTGCGGTTTCTTGACAGATCAACTACAGGGAAGGAGGGAGATGCTTGGCGAAGTGTGGAG
AAACGATTCAATCAAAATGCAGTTAATGGGAGGATCTTCAGAGAGAAATTTGGGACTTGT
ATTGGAATGGGAGAAAGCAAGGAATTTGCTGGAGAGTTATTCGATACGTTGGCTAGGCGT
AGGAAGATCAACACAGAAAATGGTATAACAATAGATGAAGTGAGAGGATTTTGGGAAGAC
ATATCAACTCAATCTCTTGATGCAAGGCTTCATATTTTCTTTGACATGTGTGACAAGAAT
GGTGATGGGAAACTATCAGAGGAAGAGGTAAAGGAGGTTCTAGTGATGAGTGCCTCGGCA
AACAAATTGTCAAAATTCAAGCAACATGCACCGACATACGCAGCTTTAATCATGGAAGAG
CTCGACCCTGATCATTTGGGATATATTGAGATGTGGCAACTTGAAGCTCTACTAAGAGGG
ATGGTGGGTTCAGAAGAAGGGGAAAAAACCCTAAAGAGATCACAAACACTAGCGAAAACC
ATGATCCCGAAAGAATACAGGACTCCAGTCAGCAAATTCTTTTACAAAACATCAGAAAAA
GTACAAGAAAACTGGAAAAGAATATGGGTCCTAACATTGTGGTTGTGCATCAACATGGTA
CTTTTTACTTGGAAGTTCCAACAATTTAAAAGAAAATCAGCATTTCAGATCATGGGTTAT
TGCGTTTGCATTGCTAAAGGTACAGGAGAGACTCTTAAGTTCAACATGGCTCTGGTTCTT
TTTCCTGTATGCAGAAGAACTCTTACTAAGCTCAGAGAAACTTTCCTTGGTTCAATATTT
CCCTTTGATGAAAATATCAATTTCCATAAGATAATTGCATTGGGAATTGCTGTTGCAACG
TTTATTCACGCACTTTTCCATACCAGCTGCAATTTTGTGAAACTAACAACGTGTCCACAG
AGTAAATTTATGACATTTCTTGGAAGCAACTTCGACTACCACCAACCGAGTTACTTGGAC
CTGGTGGCGTCTATTCCAGGTGTAACAGGCATTCTGATGACACTTTTCATGCTTTTCACC
TTCACATTGGCTTTACATTCGTTCAGAAGGAACGTCATCAAATTGCCATGGCCGTTCCAT
CATTTAGCAGGATTTAATGCGTTTTGGTATGCACATCATCTTCTGGTCCTCGTCTACATC
CTCTTGGTCCTCCATGGCTACTTCATATACCTTACAAAAGAATGGTACAAAAAGACGACA
TGGATGTACCTTGCAGTTCCGGTACTTGCATATGCTACGGAAAGAATTCTCATCGTCTAT
GAGCACAGCGACAATGTCAATATTATAAAGGCTGTCACATATACAGGGAATGTACTAGCA
TTATACATGAGTAAACCTCCAGGATTCAAGTATAAGAGTGGAATGTACCTTTTTGTTAAA
TGTCCTGATATATCAACCTTCGAATGGCATCCATTCTCAATCACTTCAGCACCAGACGAC
AACTATCTAAGTGTTCATATACGTACGTTGGGAGACTGGACTACAGAGCTAAAAACCAGA
TTTGAGAAGGCCTGTGAGCCTGATCAAGTAGCACAATCAAGGAAGGGAAGTCTTGTTAGA
ATGGAAACTAAAGCATATACAGATGTTGAACAGGCTCAATCCGAATTTCCGAAGATCATG
ATCAAAGGACCTTATGGTGCACCAGCTCAGAACTACAAGAAATATGATATCCTTCTACTA
ATTGGCTTGGGAATAGGAGCAACACCATTTATTAGCATTTTAAAGGACCTTCTTAACAAT
GAATCTCAATCTAATCAGCAAATTGGTGAATCATCAAGTAATAGGAGAGGTCCTCACAGA
GCATATTTCTATTGGGTGACCAGAGAACAAGGATCATTTGATTGGTTCAAGGGTGTTATG
GATGATATTGCTGAATATGACCATAATGAAATGATGGAAATGCACAACTATTTAACTAGT
GTTTATGAAGAAGGAGATGCTAGATCTGCACTTATTGCAATGGTGCAATCACTACAACAT
GCTAAAAATGGAGTTGATGTTGTCTCCGACAGTCGGATAAGAACACATTTTGCAAGACCA
AATTGGAGAAAGGTATTCTCTAGGTTGGCAGCAGCCCATCCATCTTCTCGAATTGGGGTG
TTTTACTGCGGAAGTCCTACTCTTACAAAACCACTTAGAAGGCTGTGTCAAGAATTTAGT
TTAAATTCATCCACTCGTTTCAATTTCCACAAAGAAAATTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052898
PEP Infomation

pacid=37450863 transcript=PGSC0003DMT400078138 locus=PGSC0003DMG400030390 ID=PGSC0003DMT400078138.v4.03 annot-version=v4.03
Sequence

MVPIDDGDLSRDNSVKWILENAEKDSTSDVHENINGANGLQEELANQKSFKRNFSISRRR
NGVVPRMGRMESGATRGLKSLRFLDRSTTGKEGDAWRSVEKRFNQNAVNGRIFREKFGTC
IGMGESKEFAGELFDTLARRRKINTENGITIDEVRGFWEDISTQSLDARLHIFFDMCDKN
GDGKLSEEEVKEVLVMSASANKLSKFKQHAPTYAALIMEELDPDHLGYIEMWQLEALLRG
MVGSEEGEKTLKRSQTLAKTMIPKEYRTPVSKFFYKTSEKVQENWKRIWVLTLWLCINMV
LFTWKFQQFKRKSAFQIMGYCVCIAKGTGETLKFNMALVLFPVCRRTLTKLRETFLGSIF
PFDENINFHKIIALGIAVATFIHALFHTSCNFVKLTTCPQSKFMTFLGSNFDYHQPSYLD
LVASIPGVTGILMTLFMLFTFTLALHSFRRNVIKLPWPFHHLAGFNAFWYAHHLLVLVYI
LLVLHGYFIYLTKEWYKKTTWMYLAVPVLAYATERILIVYEHSDNVNIIKAVTYTGNVLA
LYMSKPPGFKYKSGMYLFVKCPDISTFEWHPFSITSAPDDNYLSVHIRTLGDWTTELKTR
FEKACEPDQVAQSRKGSLVRMETKAYTDVEQAQSEFPKIMIKGPYGAPAQNYKKYDILLL
IGLGIGATPFISILKDLLNNESQSNQQIGESSSNRRGPHRAYFYWVTREQGSFDWFKGVM
DDIAEYDHNEMMEMHNYLTSVYEEGDARSALIAMVQSLQHAKNGVDVVSDSRIRTHFARP
NWRKVFSRLAAAHPSSRIGVFYCGSPTLTKPLRRLCQEFSLNSSTRFNFHKENF*

Transcript Sequence

Transcript ID

PGSC0003DMT400078138
Transcript Infomation

pacid=37450863 locus=PGSC0003DMG400030390 ID=PGSC0003DMT400078138.v4.03 annot-version=v4.03
Sequence

ATGGTGCCCATTGACGATGGGGATTTATCTAGAGACAATTCAGTGAAATGGATTCTTGAA
AATGCTGAAAAAGATAGTACGAGCGATGTCCATGAGAATATAAATGGTGCAAATGGTTTA
CAAGAAGAGCTTGCAAATCAAAAATCTTTCAAGAGAAATTTCAGCATTTCAAGACGAAGA
AATGGCGTTGTACCAAGAATGGGGCGGATGGAATCAGGAGCTACTAGAGGGCTCAAGAGC
TTGCGGTTTCTTGACAGATCAACTACAGGGAAGGAGGGAGATGCTTGGCGAAGTGTGGAG
AAACGATTCAATCAAAATGCAGTTAATGGGAGGATCTTCAGAGAGAAATTTGGGACTTGT
ATTGGAATGGGAGAAAGCAAGGAATTTGCTGGAGAGTTATTCGATACGTTGGCTAGGCGT
AGGAAGATCAACACAGAAAATGGTATAACAATAGATGAAGTGAGAGGATTTTGGGAAGAC
ATATCAACTCAATCTCTTGATGCAAGGCTTCATATTTTCTTTGACATGTGTGACAAGAAT
GGTGATGGGAAACTATCAGAGGAAGAGGTAAAGGAGGTTCTAGTGATGAGTGCCTCGGCA
AACAAATTGTCAAAATTCAAGCAACATGCACCGACATACGCAGCTTTAATCATGGAAGAG
CTCGACCCTGATCATTTGGGATATATTGAGATGTGGCAACTTGAAGCTCTACTAAGAGGG
ATGGTGGGTTCAGAAGAAGGGGAAAAAACCCTAAAGAGATCACAAACACTAGCGAAAACC
ATGATCCCGAAAGAATACAGGACTCCAGTCAGCAAATTCTTTTACAAAACATCAGAAAAA
GTACAAGAAAACTGGAAAAGAATATGGGTCCTAACATTGTGGTTGTGCATCAACATGGTA
CTTTTTACTTGGAAGTTCCAACAATTTAAAAGAAAATCAGCATTTCAGATCATGGGTTAT
TGCGTTTGCATTGCTAAAGGTACAGGAGAGACTCTTAAGTTCAACATGGCTCTGGTTCTT
TTTCCTGTATGCAGAAGAACTCTTACTAAGCTCAGAGAAACTTTCCTTGGTTCAATATTT
CCCTTTGATGAAAATATCAATTTCCATAAGATAATTGCATTGGGAATTGCTGTTGCAACG
TTTATTCACGCACTTTTCCATACCAGCTGCAATTTTGTGAAACTAACAACGTGTCCACAG
AGTAAATTTATGACATTTCTTGGAAGCAACTTCGACTACCACCAACCGAGTTACTTGGAC
CTGGTGGCGTCTATTCCAGGTGTAACAGGCATTCTGATGACACTTTTCATGCTTTTCACC
TTCACATTGGCTTTACATTCGTTCAGAAGGAACGTCATCAAATTGCCATGGCCGTTCCAT
CATTTAGCAGGATTTAATGCGTTTTGGTATGCACATCATCTTCTGGTCCTCGTCTACATC
CTCTTGGTCCTCCATGGCTACTTCATATACCTTACAAAAGAATGGTACAAAAAGACGACA
TGGATGTACCTTGCAGTTCCGGTACTTGCATATGCTACGGAAAGAATTCTCATCGTCTAT
GAGCACAGCGACAATGTCAATATTATAAAGGCTGTCACATATACAGGGAATGTACTAGCA
TTATACATGAGTAAACCTCCAGGATTCAAGTATAAGAGTGGAATGTACCTTTTTGTTAAA
TGTCCTGATATATCAACCTTCGAATGGCATCCATTCTCAATCACTTCAGCACCAGACGAC
AACTATCTAAGTGTTCATATACGTACGTTGGGAGACTGGACTACAGAGCTAAAAACCAGA
TTTGAGAAGGCCTGTGAGCCTGATCAAGTAGCACAATCAAGGAAGGGAAGTCTTGTTAGA
ATGGAAACTAAAGCATATACAGATGTTGAACAGGCTCAATCCGAATTTCCGAAGATCATG
ATCAAAGGACCTTATGGTGCACCAGCTCAGAACTACAAGAAATATGATATCCTTCTACTA
ATTGGCTTGGGAATAGGAGCAACACCATTTATTAGCATTTTAAAGGACCTTCTTAACAAT
GAATCTCAATCTAATCAGCAAATTGGTGAATCATCAAGTAATAGGAGAGGTCCTCACAGA
GCATATTTCTATTGGGTGACCAGAGAACAAGGATCATTTGATTGGTTCAAGGGTGTTATG
GATGATATTGCTGAATATGACCATAATGAAATGATGGAAATGCACAACTATTTAACTAGT
GTTTATGAAGAAGGAGATGCTAGATCTGCACTTATTGCAATGGTGCAATCACTACAACAT
GCTAAAAATGGAGTTGATGTTGTCTCCGACAGTCGGATAAGAACACATTTTGCAAGACCA
AATTGGAGAAAGGTATTCTCTAGGTTGGCAGCAGCCCATCCATCTTCTCGAATTGGGGTG
TTTTACTGCGGAAGTCCTACTCTTACAAAACCACTTAGAAGGCTGTGTCAAGAATTTAGT
TTAAATTCATCCACTCGTTTCAATTTCCACAAAGAAAATTTCTAG