Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078131
CDS Infomation

pacid=37450306 polypeptide=PGSC0003DMP400052895 locus=PGSC0003DMG400030387 ID=PGSC0003DMT400078131.v4.03 annot-version=v4.03
Sequence

ATGAAGCGTTTAATCATATATGGATTTTTCTTCGCTTGCATTGTTGGATTTTTGATGAAC
CATAAGCCTGAACCTGAAGAACAAATTGTTGTTACAAATACAACAATGTCGTCAATTCCA
GCTCAAAATTGTCACTTCGCATCGATCCAAGGAAGAAGATCATACCACGAGGATCGCGTA
ACATGCAACGTTGATCTTAAAATTCCTCGATTTGGACTTAATGATGGCGTTGAAGAGGTC
AAAATTGGTGTTGTAGCAGTTTTTGACGGGCATATTGGATCGGACGCTAGTGAGATGGCG
TCCAGGGTTTTTTTAAATAAGTTTCTCCAGAAGAACTACGGCTACCAAAATTCTAACCCT
AAGGAATCTCTGAAATCGTCGTTAGTTAAAACGATTGAAGAAATTGATGCAGAATTCAGC
AAACTCGCTCTGGAATACCAACTTTATTCTGGATCTACTGCAGTTGTTGCTCTCATATAC
AACGAAAAACAGGTTTTAGTTGCAAATGTTGGGGATTCGAAGGCGTTTATTTGCTCTGGA
AAATTGGCAAAGGAGTTGACAGAAGATCATAATGCAGATAGATTGGACGAGAGGGCTAGG
GTTGAAGCTTCTGGAGGTAAATTCACATTTTATACTAATTCTGTTCCTCTTCTCAATGGC
CATTTTCCGATGACTCGAGCTATTGGCGATCTTACTTTGAAAAGAGTTGGAATCATAGCT
ACTCCAGAAGTGACTGATTGGCTAAATTTAACATCAAAGGATGAGTTTTTGGTTGTGGCA
TCTGATGGAATATTTGAAAGCTTAAGTCCCAAAAAAGTTTGTGAGTTCTTATATGAAGCA
GAGGACCATTCAGATTTAACAGTATTGGCTCAACAAATTGTTCAGAAAGCATTTTTAGAA
GGCAGCACTGATAATTTATCAGTTGTTTTGGTTCCCTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400052895
PEP Infomation

pacid=37450306 transcript=PGSC0003DMT400078131 locus=PGSC0003DMG400030387 ID=PGSC0003DMT400078131.v4.03 annot-version=v4.03
Sequence

MKRLIIYGFFFACIVGFLMNHKPEPEEQIVVTNTTMSSIPAQNCHFASIQGRRSYHEDRV
TCNVDLKIPRFGLNDGVEEVKIGVVAVFDGHIGSDASEMASRVFLNKFLQKNYGYQNSNP
KESLKSSLVKTIEEIDAEFSKLALEYQLYSGSTAVVALIYNEKQVLVANVGDSKAFICSG
KLAKELTEDHNADRLDERARVEASGGKFTFYTNSVPLLNGHFPMTRAIGDLTLKRVGIIA
TPEVTDWLNLTSKDEFLVVASDGIFESLSPKKVCEFLYEAEDHSDLTVLAQQIVQKAFLE
GSTDNLSVVLVPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078131
Transcript Infomation

pacid=37450306 locus=PGSC0003DMG400030387 ID=PGSC0003DMT400078131.v4.03 annot-version=v4.03
Sequence

ATGAAGCGTTTAATCATATATGGATTTTTCTTCGCTTGCATTGTTGGATTTTTGATGAAC
CATAAGCCTGAACCTGAAGAACAAATTGTTGTTACAAATACAACAATGTCGTCAATTCCA
GCTCAAAATTGTCACTTCGCATCGATCCAAGGAAGAAGATCATACCACGAGGATCGCGTA
ACATGCAACGTTGATCTTAAAATTCCTCGATTTGGACTTAATGATGGCGTTGAAGAGGTC
AAAATTGGTGTTGTAGCAGTTTTTGACGGGCATATTGGATCGGACGCTAGTGAGATGGCG
TCCAGGGTTTTTTTAAATAAGTTTCTCCAGAAGAACTACGGCTACCAAAATTCTAACCCT
AAGGAATCTCTGAAATCGTCGTTAGTTAAAACGATTGAAGAAATTGATGCAGAATTCAGC
AAACTCGCTCTGGAATACCAACTTTATTCTGGATCTACTGCAGTTGTTGCTCTCATATAC
AACGAAAAACAGGTTTTAGTTGCAAATGTTGGGGATTCGAAGGCGTTTATTTGCTCTGGA
AAATTGGCAAAGGAGTTGACAGAAGATCATAATGCAGATAGATTGGACGAGAGGGCTAGG
GTTGAAGCTTCTGGAGGTAAATTCACATTTTATACTAATTCTGTTCCTCTTCTCAATGGC
CATTTTCCGATGACTCGAGCTATTGGCGATCTTACTTTGAAAAGAGTTGGAATCATAGCT
ACTCCAGAAGTGACTGATTGGCTAAATTTAACATCAAAGGATGAGTTTTTGGTTGTGGCA
TCTGATGGAATATTTGAAAGCTTAAGTCCCAAAAAAGTTTGTGAGTTCTTATATGAAGCA
GAGGACCATTCAGATTTAACAGTATTGGCTCAACAAATTGTTCAGAAAGCATTTTTAGAA
GGCAGCACTGATAATTTATCAGTTGTTTTGGTTCCCTTATGA