Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078113
CDS Infomation

pacid=37452320 polypeptide=PGSC0003DMP400052884 locus=PGSC0003DMG400030379 ID=PGSC0003DMT400078113.v4.03 annot-version=v4.03
Sequence

ATGCTCCGGTCAATACTCCGATCAGCCGCTACGGCGGCGAAATACCATCCCACCACTGGA
GACATCCGTATACCGGCAGCAATCTCAGCATCTTCCAAGCTCTCTTCTTCCAGAACCTTC
GCGACGAGCACACACCCGAAGAAGCCCAACTTCAGACCGGATATAAAACACGAAAATGCT
GCAGCAGGAGCCAAAGCTGCTGAAACGCTCAATAAGGATCTTCGTGCACGCGCTCTCAAA
GAAGACGAGAAGGATAAATCACTGGATATAGGTCCAGATGGTCGTCCACTATTCACTTCC
GCAACTTCTATTTCTGAGCTTACCAAAAAAGATACATGTACTTACATGAAATTCAGGAGG
GAAGAGCTGGAGAGAGTTTTGCCAGAGGGATTACCAGTGGGGATGCTTAAGGAATTCGGT
GACTCTATGAGAGATGCATTGCTAATACGCCAGAGTTTTCTGGATCTTCGAGATAATTTT
AGAATGGTTGTTGATCCTACTTTGCAATCTAATACTAAAGGTCTCAAAGCTCGAAAGCAA
GTTGTATTAGATGGGCCTGTGAGTTCTGGTAAGAGTATTGCCCTTGCAATGCTTGTTCAT
TGGGCACGTGATGAAGGTTGGCTAGTTCTTTATGTTCCTAAAGGCCGAGAATGGACTCAT
GGAGGCTTTTTCTATAAAAATCCTAAAACAGGATTATGGGATACTCCTGTGCAAGCAGCA
AATGTTCTCCAGGATTTCTTGAAGTATAATAAGGATCACCTCCAAAAAATACCCTGCAAA
ATTTTTGAACCTATTCCATTGGGAGAGGGAGCTGGTGTTGGATGGATGAAGGGTGCTGAT
GTGGTACAAATACCATTAGATTATACTCTTCTTGACCTGGTTCAGGTCGGGCTTAATTCC
ACTCACGCAGCTGTTGGGGTGGTAGTTCGTTTGAGGGAAGAATTATCCCTTGTCAAGGAC
ATGCCTGTTCTTATTGCTGTTGATCAAGTGAGAAAAATACACTTCGCTGTGACTTTGCCT
CTTGTTTCTATCCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052884
PEP Infomation

pacid=37452320 transcript=PGSC0003DMT400078113 locus=PGSC0003DMG400030379 ID=PGSC0003DMT400078113.v4.03 annot-version=v4.03
Sequence

MLRSILRSAATAAKYHPTTGDIRIPAAISASSKLSSSRTFATSTHPKKPNFRPDIKHENA
AAGAKAAETLNKDLRARALKEDEKDKSLDIGPDGRPLFTSATSISELTKKDTCTYMKFRR
EELERVLPEGLPVGMLKEFGDSMRDALLIRQSFLDLRDNFRMVVDPTLQSNTKGLKARKQ
VVLDGPVSSGKSIALAMLVHWARDEGWLVLYVPKGREWTHGGFFYKNPKTGLWDTPVQAA
NVLQDFLKYNKDHLQKIPCKIFEPIPLGEGAGVGWMKGADVVQIPLDYTLLDLVQVGLNS
THAAVGVVVRLREELSLVKDMPVLIAVDQVRKIHFAVTLPLVSIP*

Transcript Sequence

Transcript ID

PGSC0003DMT400078113
Transcript Infomation

pacid=37452320 locus=PGSC0003DMG400030379 ID=PGSC0003DMT400078113.v4.03 annot-version=v4.03
Sequence

ATGCTCCGGTCAATACTCCGATCAGCCGCTACGGCGGCGAAATACCATCCCACCACTGGA
GACATCCGTATACCGGCAGCAATCTCAGCATCTTCCAAGCTCTCTTCTTCCAGAACCTTC
GCGACGAGCACACACCCGAAGAAGCCCAACTTCAGACCGGATATAAAACACGAAAATGCT
GCAGCAGGAGCCAAAGCTGCTGAAACGCTCAATAAGGATCTTCGTGCACGCGCTCTCAAA
GAAGACGAGAAGGATAAATCACTGGATATAGGTCCAGATGGTCGTCCACTATTCACTTCC
GCAACTTCTATTTCTGAGCTTACCAAAAAAGATACATGTACTTACATGAAATTCAGGAGG
GAAGAGCTGGAGAGAGTTTTGCCAGAGGGATTACCAGTGGGGATGCTTAAGGAATTCGGT
GACTCTATGAGAGATGCATTGCTAATACGCCAGAGTTTTCTGGATCTTCGAGATAATTTT
AGAATGGTTGTTGATCCTACTTTGCAATCTAATACTAAAGGTCTCAAAGCTCGAAAGCAA
GTTGTATTAGATGGGCCTGTGAGTTCTGGTAAGAGTATTGCCCTTGCAATGCTTGTTCAT
TGGGCACGTGATGAAGGTTGGCTAGTTCTTTATGTTCCTAAAGGCCGAGAATGGACTCAT
GGAGGCTTTTTCTATAAAAATCCTAAAACAGGATTATGGGATACTCCTGTGCAAGCAGCA
AATGTTCTCCAGGATTTCTTGAAGTATAATAAGGATCACCTCCAAAAAATACCCTGCAAA
ATTTTTGAACCTATTCCATTGGGAGAGGGAGCTGGTGTTGGATGGATGAAGGGTGCTGAT
GTGGTACAAATACCATTAGATTATACTCTTCTTGACCTGGTTCAGGTCGGGCTTAATTCC
ACTCACGCAGCTGTTGGGGTGGTAGTTCGTTTGAGGGAAGAATTATCCCTTGTCAAGGAC
ATGCCTGTTCTTATTGCTGTTGATCAAGTGAGAAAAATACACTTCGCTGTGACTTTGCCT
CTTGTTTCTATCCCTTGA