Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078070
CDS Infomation

pacid=37452348 polypeptide=PGSC0003DMP400052852 locus=PGSC0003DMG400030366 ID=PGSC0003DMT400078070.v4.03 annot-version=v4.03
Sequence

ATGGGTGACATTGAACTTTGCAGGCTTTTCTCTCTTAGTGAGGAATTCAAATATGTTACA
GTCAGACAAGATGAGAAAATGGAATTGGCGAAGCTTCTAGATCGTGTTCCTATCCCAATA
AAAGAGAGTCTTGAGGAACCTAGTGCCAAGATCAATGTACTATTGCAGGCATATATTTCA
CGGCTGAAGCTTGAAGGTTTGTCCCTGTCATCCGACATGGTTTATATCACTCAGAGTGCT
GCACGTCTGATGCGAGCCCTTTTTGAGATTGTTCTGAAAAGGGGATGGGCTCAGTTAGCT
GAGAAGGCCTTAAAATGGTGCAAAATGATAAGCAAGAGGATGTGGAGTGTACAGACACCA
CTTCGCCAATTCCATGGCATACCAAATGAAATCTTGATGAAGTTGGAGAAGAAAGATTTG
GCTTGGGAGCGTTATTATGATCTTTCATCACAAGAATTGGGAGAGCTTATCCGGTTCCCA
AAGATGGGAAGGACATTACACAAGTTCATTCATCAGTTCCCAAAGCTGAACCTTGCTGCA
CATGTTCAACCAATTACGCGGTCAGTCTTGAGGGTTGAATTGACGATTACACCGGATTTC
CAATGGGAAGACAAGGTTCATGGTTATGTAGAACCTTTCTGGATAATTGTTGAAGATAAT
GATGGGGAGTTTATTCTTCATCATGAATATTTCATGTTGAAGAAGCAGTATATTGATGAG
GACCATACTTTGAACTTCACAGTCCCAATATATGAGCCACTGCCCCCACAGTATTTCATT
CGGGTTGTCTCTGACAAATGGCTTGGGTCCCAGACTGTTTTACCCGTCTCTTTCCGACAT
CTGATTTTGCCAGAGAAATATCCTCCTCCCACCGAGTTACTAGACTTGCAACCTCTGCCA
GTTACTGCATTGAGGAATCCAGCATATGAAGCACTTTATCAAGATTTCAAGCATTTCAAT
CCGGTTCAGACTCAGGTTTTCACAGTGCTGTACAATTCAGATGACAATGTCTTGGTTGCA
GCTCCAACTGGTAGTGGGAAGACTATTTGTGCTGAATTTGCCATATTGAGGAATCATCAG
AAAGGACCTGATAGTACCATTCGTGCTGTGTATATAGCTCCACTAGAGGCTCTTGCTAAG
GAGCGGTTCAACGATTGGAAAACGAAATTTGGGGACCATCTGGGAATGAGGGTTGTTGAA
TTAACTGGAGAAACCGCCAGTGATCTGAAGCTGTTGGAGAAGGGTCAACTAATTATCAGC
ACACCTGAGAAATGGGATGCTTTGTCTCGTCGCTGGAAACAACGTAAGCATGTTCAGCAA
GTCAGTCTTTTCATTATTGATGAATTGCACCTGATTGGGGGTCAAGGTGGTCCAATCCTG
GAGGTGATCGTCTCTCGGATGAGATATATCTCAAGCCAGGTTGAGAACAAGATCCGCATC
GTTGCTTTGTCAACTTCCTTAGCTAATGCCAAGGATTTGGGAGAATGGATTGGGGCTACA
TCTCATGGGCTCTTCAACTTTCCGCCTGGTGTAAGGCCTGTGCCACTTGAAATACACATT
CAAGGTGTTGATATTGCTAACTTTGAAGCTAGGATGCAAGCCATGACAAAACCCACATAT
ACTGCAATAGTCCAACATGCAAGGAAGGGAAAACCTGCACTTGTGTACGTTCCCACAAGG
AAGCATGCTCGCTTGACTGCTGTAGATCTGATGACTTATTCAAGCATGGACAGCGAAGAC
ACACCCATATTTCTGCTACGATCTGCAGAAGAGCTGGAACCTTTCGTGGAAAGGATCAAT
GAACCTATGCTGCAAGAGACACTCAAGTATGGTGTGGGCTACTTGCATGAGGGGTTGAGT
GCCACTGATCAGGATATAGTGAAGACATTGTTTGAAACTGGATGGATTCAAGTGTGTGTG
ATGAATGGTACAATGTGTTGGGGAGTACCGTTATCTGCACATTTGGTGGTGGTCATGGGG
ACACAGTATTATGATGGTAGGGAAAATGCACACACTGATTATCCCGTTACTGATTTGTTG
CAGATGATGGGCCATGCCAGTCGACCTCTTGTAGATAGCTCAGGGAAGTGTGTTATCCTC
TGCCATGCACCACGCAAGGATTACTACAAGAAGTTCTTGTATGAAGCATTCCCAGTTGAA
AGCCATCTGCAACATTATCTCCATGATAATTTGAATGCTGAGGTGGTGGTTGGCGTTATT
CAGAACAAGCAGGATGCTGTTGATTACCTAACATGGACCTTCATGTATAGAAGGCTGACA
CAGAATCCAAATTACTACAATCTGCAGGGTGTTAGTCATAGGCATCTGTCTGACCAACTG
TCGGAGCTAGTGGAGAATACCATCAGTGACTTGGAGGCAAGTAAATGTGTCACTATTGAG
GATGAATTTTTGCTTTCACCTTTGAATCTTGGTATGATAGCGTCATATTATTATATCAGT
TACACCACAATAGAGCGTTTTAGCTCTTCTGTGACCTCCAAGACAAAGTTGAAGGGCTTG
CTGGAAATATTGGCGTCAGCATCGGAGTTTGAACAGCTGCCAATACGACCAGGTGAAGAG
GAATTGATAAGAAGGTTGATTAATCATCTGCGTTTCTCTTTTGAGAATCCAAAGTACACA
GATCCTCATGTCAAGGCTAATGCTCTTTTACAAGCCCATTTCTCTAGGCAAATGGTGGGT
GGAAATCTTGCTTCTGACCAGCAAGAGGTGCTGCTTTCTGCTACTAGGCTGCTTCAAGCA
ATGGTTGATGTTATTTCCAGTAATGGTTGGCTTAGTCTAGCACTTCTAACAATGGAGGTG
AGCCAGATGGTGACACAAGGGATGTGGGAACGTGACTCGATGCTTCTCCAGCTTCCACAC
TTCACAAAGGAATTGGCTAAGAAGTGCCAAGAAAATCCAGGGAGGAGTATAGAGACAGTG
TTTGATTTGGTGGAGATGGAAGATGATGAGAGGCGTGAGCTCTTGCAAATGTCAGACTTG
CAGCTTCTGGATATTGCCCGGTTCTGTAACCGGTTTCCAAACATTGATTTGACGTATGAT
GTGCTGGACAGTGATAATGTGAGTGCTGGAGATGATGTAAGTGTGCAGGTAACCCTTGAG
CGAGATCTTGAAGGTAGAACAGAAGTTGGACCTGTTTTTGCACCTAGATATCCCAAAACC
AAAGAGGAAGGATGGTGGCTTGTTGTCGGGGATACAAAGAGCAACCAATTACTGGCCATT
AAGAGAGTCACCCTCCAAAGGAAATCTAAGGTCAAGCTGGATTTTGCTGCCCCTGCTGAA
GCTGGAACAAGGAACTACACACTCTATTTCATGTGCGATTCTTATCTGGGTTGTGACCAG
GAATACAACTTTACTCTTGATGTTAAAGAGGCAATGGCTGAAGATGACAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052852
PEP Infomation

pacid=37452348 transcript=PGSC0003DMT400078070 locus=PGSC0003DMG400030366 ID=PGSC0003DMT400078070.v4.03 annot-version=v4.03
Sequence

MGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQAYIS
RLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSVQTP
LRQFHGIPNEILMKLEKKDLAWERYYDLSSQELGELIRFPKMGRTLHKFIHQFPKLNLAA
HVQPITRSVLRVELTITPDFQWEDKVHGYVEPFWIIVEDNDGEFILHHEYFMLKKQYIDE
DHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLP
VTALRNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQ
KGPDSTIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQLIIS
TPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISSQVENKIRI
VALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTY
TAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLLRSAEELEPFVERIN
EPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHLVVVMG
TQYYDGRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYEAFPVE
SHLQHYLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDQL
SELVENTISDLEASKCVTIEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKTKLKGL
LEILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFSRQMVG
GNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSMLLQLPH
FTKELAKKCQENPGRSIETVFDLVEMEDDERRELLQMSDLQLLDIARFCNRFPNIDLTYD
VLDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSNQLLAI
KRVTLQRKSKVKLDFAAPAEAGTRNYTLYFMCDSYLGCDQEYNFTLDVKEAMAEDDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078070
Transcript Infomation

pacid=37452348 locus=PGSC0003DMG400030366 ID=PGSC0003DMT400078070.v4.03 annot-version=v4.03
Sequence

ATGGGTGACATTGAACTTTGCAGGCTTTTCTCTCTTAGTGAGGAATTCAAATATGTTACA
GTCAGACAAGATGAGAAAATGGAATTGGCGAAGCTTCTAGATCGTGTTCCTATCCCAATA
AAAGAGAGTCTTGAGGAACCTAGTGCCAAGATCAATGTACTATTGCAGGCATATATTTCA
CGGCTGAAGCTTGAAGGTTTGTCCCTGTCATCCGACATGGTTTATATCACTCAGAGTGCT
GCACGTCTGATGCGAGCCCTTTTTGAGATTGTTCTGAAAAGGGGATGGGCTCAGTTAGCT
GAGAAGGCCTTAAAATGGTGCAAAATGATAAGCAAGAGGATGTGGAGTGTACAGACACCA
CTTCGCCAATTCCATGGCATACCAAATGAAATCTTGATGAAGTTGGAGAAGAAAGATTTG
GCTTGGGAGCGTTATTATGATCTTTCATCACAAGAATTGGGAGAGCTTATCCGGTTCCCA
AAGATGGGAAGGACATTACACAAGTTCATTCATCAGTTCCCAAAGCTGAACCTTGCTGCA
CATGTTCAACCAATTACGCGGTCAGTCTTGAGGGTTGAATTGACGATTACACCGGATTTC
CAATGGGAAGACAAGGTTCATGGTTATGTAGAACCTTTCTGGATAATTGTTGAAGATAAT
GATGGGGAGTTTATTCTTCATCATGAATATTTCATGTTGAAGAAGCAGTATATTGATGAG
GACCATACTTTGAACTTCACAGTCCCAATATATGAGCCACTGCCCCCACAGTATTTCATT
CGGGTTGTCTCTGACAAATGGCTTGGGTCCCAGACTGTTTTACCCGTCTCTTTCCGACAT
CTGATTTTGCCAGAGAAATATCCTCCTCCCACCGAGTTACTAGACTTGCAACCTCTGCCA
GTTACTGCATTGAGGAATCCAGCATATGAAGCACTTTATCAAGATTTCAAGCATTTCAAT
CCGGTTCAGACTCAGGTTTTCACAGTGCTGTACAATTCAGATGACAATGTCTTGGTTGCA
GCTCCAACTGGTAGTGGGAAGACTATTTGTGCTGAATTTGCCATATTGAGGAATCATCAG
AAAGGACCTGATAGTACCATTCGTGCTGTGTATATAGCTCCACTAGAGGCTCTTGCTAAG
GAGCGGTTCAACGATTGGAAAACGAAATTTGGGGACCATCTGGGAATGAGGGTTGTTGAA
TTAACTGGAGAAACCGCCAGTGATCTGAAGCTGTTGGAGAAGGGTCAACTAATTATCAGC
ACACCTGAGAAATGGGATGCTTTGTCTCGTCGCTGGAAACAACGTAAGCATGTTCAGCAA
GTCAGTCTTTTCATTATTGATGAATTGCACCTGATTGGGGGTCAAGGTGGTCCAATCCTG
GAGGTGATCGTCTCTCGGATGAGATATATCTCAAGCCAGGTTGAGAACAAGATCCGCATC
GTTGCTTTGTCAACTTCCTTAGCTAATGCCAAGGATTTGGGAGAATGGATTGGGGCTACA
TCTCATGGGCTCTTCAACTTTCCGCCTGGTGTAAGGCCTGTGCCACTTGAAATACACATT
CAAGGTGTTGATATTGCTAACTTTGAAGCTAGGATGCAAGCCATGACAAAACCCACATAT
ACTGCAATAGTCCAACATGCAAGGAAGGGAAAACCTGCACTTGTGTACGTTCCCACAAGG
AAGCATGCTCGCTTGACTGCTGTAGATCTGATGACTTATTCAAGCATGGACAGCGAAGAC
ACACCCATATTTCTGCTACGATCTGCAGAAGAGCTGGAACCTTTCGTGGAAAGGATCAAT
GAACCTATGCTGCAAGAGACACTCAAGTATGGTGTGGGCTACTTGCATGAGGGGTTGAGT
GCCACTGATCAGGATATAGTGAAGACATTGTTTGAAACTGGATGGATTCAAGTGTGTGTG
ATGAATGGTACAATGTGTTGGGGAGTACCGTTATCTGCACATTTGGTGGTGGTCATGGGG
ACACAGTATTATGATGGTAGGGAAAATGCACACACTGATTATCCCGTTACTGATTTGTTG
CAGATGATGGGCCATGCCAGTCGACCTCTTGTAGATAGCTCAGGGAAGTGTGTTATCCTC
TGCCATGCACCACGCAAGGATTACTACAAGAAGTTCTTGTATGAAGCATTCCCAGTTGAA
AGCCATCTGCAACATTATCTCCATGATAATTTGAATGCTGAGGTGGTGGTTGGCGTTATT
CAGAACAAGCAGGATGCTGTTGATTACCTAACATGGACCTTCATGTATAGAAGGCTGACA
CAGAATCCAAATTACTACAATCTGCAGGGTGTTAGTCATAGGCATCTGTCTGACCAACTG
TCGGAGCTAGTGGAGAATACCATCAGTGACTTGGAGGCAAGTAAATGTGTCACTATTGAG
GATGAATTTTTGCTTTCACCTTTGAATCTTGGTATGATAGCGTCATATTATTATATCAGT
TACACCACAATAGAGCGTTTTAGCTCTTCTGTGACCTCCAAGACAAAGTTGAAGGGCTTG
CTGGAAATATTGGCGTCAGCATCGGAGTTTGAACAGCTGCCAATACGACCAGGTGAAGAG
GAATTGATAAGAAGGTTGATTAATCATCTGCGTTTCTCTTTTGAGAATCCAAAGTACACA
GATCCTCATGTCAAGGCTAATGCTCTTTTACAAGCCCATTTCTCTAGGCAAATGGTGGGT
GGAAATCTTGCTTCTGACCAGCAAGAGGTGCTGCTTTCTGCTACTAGGCTGCTTCAAGCA
ATGGTTGATGTTATTTCCAGTAATGGTTGGCTTAGTCTAGCACTTCTAACAATGGAGGTG
AGCCAGATGGTGACACAAGGGATGTGGGAACGTGACTCGATGCTTCTCCAGCTTCCACAC
TTCACAAAGGAATTGGCTAAGAAGTGCCAAGAAAATCCAGGGAGGAGTATAGAGACAGTG
TTTGATTTGGTGGAGATGGAAGATGATGAGAGGCGTGAGCTCTTGCAAATGTCAGACTTG
CAGCTTCTGGATATTGCCCGGTTCTGTAACCGGTTTCCAAACATTGATTTGACGTATGAT
GTGCTGGACAGTGATAATGTGAGTGCTGGAGATGATGTAAGTGTGCAGGTAACCCTTGAG
CGAGATCTTGAAGGTAGAACAGAAGTTGGACCTGTTTTTGCACCTAGATATCCCAAAACC
AAAGAGGAAGGATGGTGGCTTGTTGTCGGGGATACAAAGAGCAACCAATTACTGGCCATT
AAGAGAGTCACCCTCCAAAGGAAATCTAAGGTCAAGCTGGATTTTGCTGCCCCTGCTGAA
GCTGGAACAAGGAACTACACACTCTATTTCATGTGCGATTCTTATCTGGGTTGTGACCAG
GAATACAACTTTACTCTTGATGTTAAAGAGGCAATGGCTGAAGATGACAGTTGA