Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078033
CDS Infomation

pacid=37449837 polypeptide=PGSC0003DMP400052830 locus=PGSC0003DMG400030351 ID=PGSC0003DMT400078033.v4.03 annot-version=v4.03
Sequence

ATGCCGACAATCGTCGACCGTCGTTCAACACGTGTCTCCGGTGGGAGTAAAGTCGCCGAT
CCAATCGCCATCAACGGTGAGATTGACTCCACTCCTCAAAAACGCAAACTCAGATCCAGT
TCCAGTTCCACTACTGAAGACAGTAGAGTAACTTCGGATTTAACTCCGTCGCCCTTGAAA
AGCTCTCCGAGCAAATGGAAATCGCCGCGCCGATGTGTCAATGACAGCCCTAAGAGTACT
CCAAATGCAAATCGAGGAGCTAAAGCAGTAAATCTGAGCAAATCACCTGTGAAAAGGAGA
TTATCGGAAAGTTTTCTAGAGAAGCCTATGTGGAATCCAAGAGATATGGAGCAGTTAAAT
GGAGTGAAAGAGGCATTGCATGTGTCTAGGGCTCCATCAAATCTGGTGTGTCGAGAAGTT
GAGAACAATAGAATTCTGGAGTTCTGTAAGCAAGCAGTGGAACAAGAGAAGGCTGGAAGT
TTGTATATCTGCGGCTGCCCAGGGACTGGAAAGTCTCTATCAATGGAGAAGGTTAACAAG
GTCCTGGTTAATTGGGCAGAAGAGTCTGGTTTTCAGGCTCCAGACACATTATCACTCAAC
TGCAGTTCTCTGTCAAACACATCTGACATTTTTGGCAAGATACTTGACAAAATTAAACTA
CGGAGAAAGATAAATAGTTGCAAATCACCATTGCAGTATCTTCAGAAAATGTTTTCTGAG
AAGCAGCAGTCAGCAGTCACAAAGATGTTGTTAATAGTTGCTGATGAGTTGGATTACTTG
ATCACAAAAGACAGAGCTGTGCTTCATGAGCTGTTCATGCTAACAACGCTCCCGTTCTCC
AGATTTATTCTGATAGGAATTGCTAATGCAATAGACCTAGCAGATAAATTTCTTCCAAAA
CTACAATCCTTGAATTGCAAGCCAGCAGTGGTAACATTTCGTGCCTATTCTAAGGACCAG
ATCATCTCCATTCTTCAGCAAAGATTAAAGGCATTTCCTTACACAGTCTTCCAGCCTCAA
GCATTGGAACTATGTGCACGGAAAGTTGCTTCTGCATCTGGAGATATGAGGAAGGCTCTA
TGGATATGCAGGAGTGCAATTGAGATGTTAGAATCTGACATAAGAGATTCTATCAACAGC
CTTGATTTACCATCATTACATGGAGGAGTTTCTGATCAACAGAGGGATTGTGCTTGTGAT
AAAGCACTTATACACGAGAGCAATGTTGTTAGGGTTGATCATGTGGCTATTGCTTTATCA
AAGGCATATAGATCGCCAGTGGTGGATACTATACAATCACTTCCACAACATCAACAGATT
ATTCTTTGCTCTGCTGTCAAGCTATTCAGGGGGAAGAAGAAGGATGCCACTATAGGCGAG
CTGAACATCTCTTACCTTGATATCTGTAAATCAACTTTAATACCACCAGCAGGAATCATG
GAGCTATCAAGCATGTGTAGAGTGCTAGGAGACCAGGGGATCCTAAAACTGGGGAAGGCT
AGGGAAGAAAAATTAAGTAGAGTAACTCTAAAGGTAGATGAAGCAGACATCACCTTTGCA
TTGCAGGGAATACGCTTCTTTCGAAATTGTCTTCAACAATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052830
PEP Infomation

pacid=37449837 transcript=PGSC0003DMT400078033 locus=PGSC0003DMG400030351 ID=PGSC0003DMT400078033.v4.03 annot-version=v4.03
Sequence

MPTIVDRRSTRVSGGSKVADPIAINGEIDSTPQKRKLRSSSSSTTEDSRVTSDLTPSPLK
SSPSKWKSPRRCVNDSPKSTPNANRGAKAVNLSKSPVKRRLSESFLEKPMWNPRDMEQLN
GVKEALHVSRAPSNLVCREVENNRILEFCKQAVEQEKAGSLYICGCPGTGKSLSMEKVNK
VLVNWAEESGFQAPDTLSLNCSSLSNTSDIFGKILDKIKLRRKINSCKSPLQYLQKMFSE
KQQSAVTKMLLIVADELDYLITKDRAVLHELFMLTTLPFSRFILIGIANAIDLADKFLPK
LQSLNCKPAVVTFRAYSKDQIISILQQRLKAFPYTVFQPQALELCARKVASASGDMRKAL
WICRSAIEMLESDIRDSINSLDLPSLHGGVSDQQRDCACDKALIHESNVVRVDHVAIALS
KAYRSPVVDTIQSLPQHQQIILCSAVKLFRGKKKDATIGELNISYLDICKSTLIPPAGIM
ELSSMCRVLGDQGILKLGKAREEKLSRVTLKVDEADITFALQGIRFFRNCLQQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078033
Transcript Infomation

pacid=37449837 locus=PGSC0003DMG400030351 ID=PGSC0003DMT400078033.v4.03 annot-version=v4.03
Sequence

ATGCCGACAATCGTCGACCGTCGTTCAACACGTGTCTCCGGTGGGAGTAAAGTCGCCGAT
CCAATCGCCATCAACGGTGAGATTGACTCCACTCCTCAAAAACGCAAACTCAGATCCAGT
TCCAGTTCCACTACTGAAGACAGTAGAGTAACTTCGGATTTAACTCCGTCGCCCTTGAAA
AGCTCTCCGAGCAAATGGAAATCGCCGCGCCGATGTGTCAATGACAGCCCTAAGAGTACT
CCAAATGCAAATCGAGGAGCTAAAGCAGTAAATCTGAGCAAATCACCTGTGAAAAGGAGA
TTATCGGAAAGTTTTCTAGAGAAGCCTATGTGGAATCCAAGAGATATGGAGCAGTTAAAT
GGAGTGAAAGAGGCATTGCATGTGTCTAGGGCTCCATCAAATCTGGTGTGTCGAGAAGTT
GAGAACAATAGAATTCTGGAGTTCTGTAAGCAAGCAGTGGAACAAGAGAAGGCTGGAAGT
TTGTATATCTGCGGCTGCCCAGGGACTGGAAAGTCTCTATCAATGGAGAAGGTTAACAAG
GTCCTGGTTAATTGGGCAGAAGAGTCTGGTTTTCAGGCTCCAGACACATTATCACTCAAC
TGCAGTTCTCTGTCAAACACATCTGACATTTTTGGCAAGATACTTGACAAAATTAAACTA
CGGAGAAAGATAAATAGTTGCAAATCACCATTGCAGTATCTTCAGAAAATGTTTTCTGAG
AAGCAGCAGTCAGCAGTCACAAAGATGTTGTTAATAGTTGCTGATGAGTTGGATTACTTG
ATCACAAAAGACAGAGCTGTGCTTCATGAGCTGTTCATGCTAACAACGCTCCCGTTCTCC
AGATTTATTCTGATAGGAATTGCTAATGCAATAGACCTAGCAGATAAATTTCTTCCAAAA
CTACAATCCTTGAATTGCAAGCCAGCAGTGGTAACATTTCGTGCCTATTCTAAGGACCAG
ATCATCTCCATTCTTCAGCAAAGATTAAAGGCATTTCCTTACACAGTCTTCCAGCCTCAA
GCATTGGAACTATGTGCACGGAAAGTTGCTTCTGCATCTGGAGATATGAGGAAGGCTCTA
TGGATATGCAGGAGTGCAATTGAGATGTTAGAATCTGACATAAGAGATTCTATCAACAGC
CTTGATTTACCATCATTACATGGAGGAGTTTCTGATCAACAGAGGGATTGTGCTTGTGAT
AAAGCACTTATACACGAGAGCAATGTTGTTAGGGTTGATCATGTGGCTATTGCTTTATCA
AAGGCATATAGATCGCCAGTGGTGGATACTATACAATCACTTCCACAACATCAACAGATT
ATTCTTTGCTCTGCTGTCAAGCTATTCAGGGGGAAGAAGAAGGATGCCACTATAGGCGAG
CTGAACATCTCTTACCTTGATATCTGTAAATCAACTTTAATACCACCAGCAGGAATCATG
GAGCTATCAAGCATGTGTAGAGTGCTAGGAGACCAGGGGATCCTAAAACTGGGGAAGGCT
AGGGAAGAAAAATTAAGTAGAGTAACTCTAAAGGTAGATGAAGCAGACATCACCTTTGCA
TTGCAGGGAATACGCTTCTTTCGAAATTGTCTTCAACAATCTTGA