Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078025
CDS Infomation

pacid=37453298 polypeptide=PGSC0003DMP400052824 locus=PGSC0003DMG400030346 ID=PGSC0003DMT400078025.v4.03 annot-version=v4.03
Sequence

ATGACTCGTACCACTTCCCAAAACCGCACCCGTACCCGAACCCGCCGTCTTTCAGCTTGT
TACCGCCACCCATCGGAGCCGGTCACCGGCATCTGTGCCGCATGCCTGCGTGAACGTCTC
TCCGGTCTTGACTCTTCTGCTGACTCTGAACTCTCTATTGTTCCTACATTCTCAAATTCT
TTCGAAAACCCAGATGTTGATAATGGACCCGAACCCGGACCCGGATTTGATGGTAGCCGG
AGTAAAGCTGCTACATCGTCGTTTTCTCCGGATCTCCGGCGTTGTAGGTCTGTTTCTACT
GCCAGGTGTGAAGGTTCGTGTAGCTGGTCGGAGCCACGTCGGAGATCTTGTGACGATAGG
TCGTCCAGGAATACTCTTGTAAATCTCTTTGGAGTTGATGATGAGGTGGGTGGACCCAAT
GCCGGTTTCAATGTTGAATCGAAGAACCTGGGGTTGACGAATTTGTCTGATAATGTTTGT
CAGTCGATAGTAGAGCATAAAGAGAGTGAAGAAGTTAGGGTTCGTGCTGATGCATTGGTG
AGAATAGAGGATATAGATGAAGATACTCAAGATGGAGAGCTTAAGACAATGAAAGAGTTC
ATTGATCTCGAATTTCACACAAAAAATCAGAAATCGAGGGATTTCAGAGACATTGCGGTG
AATTTCAGGGAAGCAACTTCAGTCTTCAGCAAGAAATTGCAAAAATGGAGGCAAAAGCAG
AGGGAAAAGAAGCTTAATAGTAGAAATGCTGAAGGAAATGATAGGTTTTCAGCTGGAAAT
AACAAGTTGATAGGTTATAAATCAAAGGATAGTCGGTCTGAGATTGGGGAATGTGCAATG
GGGAGGAGATCTTGTGATACAGAACCTCGTTTTTCAGTTGACGCTGGGCGATTGTCGTTG
GACGGTCCAGGGATTTCAATTGATGAGCCTAGAGCTTCTTGGGATGGATATATGGTCGCT
AGGACTATTCCACGGCTAACACCAATGTTATCAGTTGTCGAAAATGTGCTTTTAGGGAAT
GGAAATGGGTTTGATAGGCATCGAGCATCGCTTGATGGGCAAATGCAGGCTATAGTAGAA
GATGAGAGTAGTTCAGGTGGATCAGGACAATCCAATTCGGATTCTTCATCATCACAAAGG
GGAAGTAGTTTTGATAGGTCGAGTTCTGTTCAGAGTTTTGGCAAGAGGACATTGGATTTG
GAGGTTAACGAAGGCAAGTATATGTCAAATTCATCTTCTGCTCACGTCAAGTTGGTTATT
ACAGAGAGGGAATTGAAAGATTGGCGCTTGAATCCTATCAAAGATGATAATTTGAATAAG
TATGAATCATTTCCCAAGAACGGAATTGTTGCTGAAAGTTGTGACCCCAAGAAGGGGTCC
AAGAAGCCTGCTCGGTGGCGAGAGGTGTTCAATCTCTTTGGTAACAAGCAAAAGCTGAAT
AACAATAAGGGAGAAACCCGAAAAGGAGAAGGAGAAACCATCAGTTCAGTCACTGATAGC
AACGGGAAGCAAGGGGACAAGGGTTATGATAATGTAAAGGAGGCTGCTCAATGGAGGCTT
TCACGCAGCAGCAGCATTGTTGGGGCTAGAAAATCCTGCAGCAGCTCCTACATTCCTGCT
AGGAATTCCTGCAGCAGTGCTTTCGATCAGCCTAGGAATTCGTGTGACATGACTGAACTA
AATTACAGTAAGAAGAAAGTTGCTGAACGTGCTGCCTCTGCTAACTTTGGCAGGGATGCT
TTTGTGCTGGAGAGGAACAGGAGTGTCAAATGCTCTTCAAATGACATTGATAATGGTACG
CTGCCATTTTATTTGATGCCATTGAGGACTTCTAGGAGCCGTAGATTCACTGAGAACAAG
TTAACAAAGCCCCTTCACGCTACTGGCAATGGTTTGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052824
PEP Infomation

pacid=37453298 transcript=PGSC0003DMT400078025 locus=PGSC0003DMG400030346 ID=PGSC0003DMT400078025.v4.03 annot-version=v4.03
Sequence

MTRTTSQNRTRTRTRRLSACYRHPSEPVTGICAACLRERLSGLDSSADSELSIVPTFSNS
FENPDVDNGPEPGPGFDGSRSKAATSSFSPDLRRCRSVSTARCEGSCSWSEPRRRSCDDR
SSRNTLVNLFGVDDEVGGPNAGFNVESKNLGLTNLSDNVCQSIVEHKESEEVRVRADALV
RIEDIDEDTQDGELKTMKEFIDLEFHTKNQKSRDFRDIAVNFREATSVFSKKLQKWRQKQ
REKKLNSRNAEGNDRFSAGNNKLIGYKSKDSRSEIGECAMGRRSCDTEPRFSVDAGRLSL
DGPGISIDEPRASWDGYMVARTIPRLTPMLSVVENVLLGNGNGFDRHRASLDGQMQAIVE
DESSSGGSGQSNSDSSSSQRGSSFDRSSSVQSFGKRTLDLEVNEGKYMSNSSSAHVKLVI
TERELKDWRLNPIKDDNLNKYESFPKNGIVAESCDPKKGSKKPARWREVFNLFGNKQKLN
NNKGETRKGEGETISSVTDSNGKQGDKGYDNVKEAAQWRLSRSSSIVGARKSCSSSYIPA
RNSCSSAFDQPRNSCDMTELNYSKKKVAERAASANFGRDAFVLERNRSVKCSSNDIDNGT
LPFYLMPLRTSRSRRFTENKLTKPLHATGNGLH*

Transcript Sequence

Transcript ID

PGSC0003DMT400078025
Transcript Infomation

pacid=37453298 locus=PGSC0003DMG400030346 ID=PGSC0003DMT400078025.v4.03 annot-version=v4.03
Sequence

ATGACTCGTACCACTTCCCAAAACCGCACCCGTACCCGAACCCGCCGTCTTTCAGCTTGT
TACCGCCACCCATCGGAGCCGGTCACCGGCATCTGTGCCGCATGCCTGCGTGAACGTCTC
TCCGGTCTTGACTCTTCTGCTGACTCTGAACTCTCTATTGTTCCTACATTCTCAAATTCT
TTCGAAAACCCAGATGTTGATAATGGACCCGAACCCGGACCCGGATTTGATGGTAGCCGG
AGTAAAGCTGCTACATCGTCGTTTTCTCCGGATCTCCGGCGTTGTAGGTCTGTTTCTACT
GCCAGGTGTGAAGGTTCGTGTAGCTGGTCGGAGCCACGTCGGAGATCTTGTGACGATAGG
TCGTCCAGGAATACTCTTGTAAATCTCTTTGGAGTTGATGATGAGGTGGGTGGACCCAAT
GCCGGTTTCAATGTTGAATCGAAGAACCTGGGGTTGACGAATTTGTCTGATAATGTTTGT
CAGTCGATAGTAGAGCATAAAGAGAGTGAAGAAGTTAGGGTTCGTGCTGATGCATTGGTG
AGAATAGAGGATATAGATGAAGATACTCAAGATGGAGAGCTTAAGACAATGAAAGAGTTC
ATTGATCTCGAATTTCACACAAAAAATCAGAAATCGAGGGATTTCAGAGACATTGCGGTG
AATTTCAGGGAAGCAACTTCAGTCTTCAGCAAGAAATTGCAAAAATGGAGGCAAAAGCAG
AGGGAAAAGAAGCTTAATAGTAGAAATGCTGAAGGAAATGATAGGTTTTCAGCTGGAAAT
AACAAGTTGATAGGTTATAAATCAAAGGATAGTCGGTCTGAGATTGGGGAATGTGCAATG
GGGAGGAGATCTTGTGATACAGAACCTCGTTTTTCAGTTGACGCTGGGCGATTGTCGTTG
GACGGTCCAGGGATTTCAATTGATGAGCCTAGAGCTTCTTGGGATGGATATATGGTCGCT
AGGACTATTCCACGGCTAACACCAATGTTATCAGTTGTCGAAAATGTGCTTTTAGGGAAT
GGAAATGGGTTTGATAGGCATCGAGCATCGCTTGATGGGCAAATGCAGGCTATAGTAGAA
GATGAGAGTAGTTCAGGTGGATCAGGACAATCCAATTCGGATTCTTCATCATCACAAAGG
GGAAGTAGTTTTGATAGGTCGAGTTCTGTTCAGAGTTTTGGCAAGAGGACATTGGATTTG
GAGGTTAACGAAGGCAAGTATATGTCAAATTCATCTTCTGCTCACGTCAAGTTGGTTATT
ACAGAGAGGGAATTGAAAGATTGGCGCTTGAATCCTATCAAAGATGATAATTTGAATAAG
TATGAATCATTTCCCAAGAACGGAATTGTTGCTGAAAGTTGTGACCCCAAGAAGGGGTCC
AAGAAGCCTGCTCGGTGGCGAGAGGTGTTCAATCTCTTTGGTAACAAGCAAAAGCTGAAT
AACAATAAGGGAGAAACCCGAAAAGGAGAAGGAGAAACCATCAGTTCAGTCACTGATAGC
AACGGGAAGCAAGGGGACAAGGGTTATGATAATGTAAAGGAGGCTGCTCAATGGAGGCTT
TCACGCAGCAGCAGCATTGTTGGGGCTAGAAAATCCTGCAGCAGCTCCTACATTCCTGCT
AGGAATTCCTGCAGCAGTGCTTTCGATCAGCCTAGGAATTCGTGTGACATGACTGAACTA
AATTACAGTAAGAAGAAAGTTGCTGAACGTGCTGCCTCTGCTAACTTTGGCAGGGATGCT
TTTGTGCTGGAGAGGAACAGGAGTGTCAAATGCTCTTCAAATGACATTGATAATGGTACG
CTGCCATTTTATTTGATGCCATTGAGGACTTCTAGGAGCCGTAGATTCACTGAGAACAAG
TTAACAAAGCCCCTTCACGCTACTGGCAATGGTTTGCACTGA