Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078017
CDS Infomation

pacid=37450586 polypeptide=PGSC0003DMP400052818 locus=PGSC0003DMG400030344 ID=PGSC0003DMT400078017.v4.03 annot-version=v4.03
Sequence

ATGTCGGTGCAAGAATATCTGGATAAGCACTTGCTATCTCGGAGAATCGAAGACGCTGTC
AATGCTGCCGTTAGAGCTAAAACTTCCGATCCCGTCCTCTTCATTTCGAATCACATGAGG
AAAGCTGTACCTTCGGTGATAACTAAGGTGAAAGCCCGGCAGATATTGGATAGTAGAGGG
ATTCCGACCGTCGAAGTTGATTTGCACACTAACAAAGGACTCTTCCGTGCTTCTGCTCCC
AGTGGTGCTTCATCGGGAATGTATGAGGCGATTGAACTGCGTGATGGAGAAAAAGGAACT
TATCTTGGAAATAGTGTGAATAGAGCTGTCAAGAATATTAATGAGAAAATTTCAGTAGCA
TTGGTTGGTATGGATCCAACTCTTCAATCTCAGATTGACCAGGTCATGATAGACTTGGAC
AAAACAGAAAATAAGAGTGAACTTGGAGCGAATGCTATTTTAGCTGTCTCCATAGCTGCT
TGCAAAGCTGGAGCTGCTGAAAAAGAGGTTTCTCTTCACAAACACATTGCTGATCTTTCT
GGTCAAACAAGCCCGCTTCTTCCTGTTCCGGTCTTTACTCTCATAAGTGGAGGAAAACAT
GCTGGAAACAACTTGGCTATTAAGGAGATAATGATTCTTCCAGTGGGATCAAGCACATTT
GAGGAGGCTTTACAAATGGGTTCGGAGACCTATCATCATTTGAAGGCAGTTATTACAGAG
ACATATGGTGCACATGGATGTAATGTTGGTGAAGACGGCGGTTTTACTCCCAACATCTCC
AGCTTAAGAGATGGCTTGGACCTTGTTCAAAAGGCTATTGGGAGAACTGGATACAATGAG
AAAATAAAGATAGCAATTGGTGTTGCTGCCACTGAGTTTTGCATAGGTACAAAATATGAT
CTAGATTTTAAAACTCCAAATAAATCTGGACAAAATTTTAAATCAGGACAGGATATGATT
GATATGTACAAAGAACTGTGCGCAGACTACCCCATAGCATCAATTGAAGATCCATTTGAC
AAGGAGGACTGGGAGCATGTCAAGTACTTTTCGGGTCTTGGAATATGCCAGGTGGTAGGA
GGTGACTTAATAATGTCAAATCCTAAACGGATCGAGAGAGCCATACAAGAGAACTCGTGC
AATTCCCTTCTTCTCAAGGTTAATCAGATTGGTACAGTAACGGAAGCCATTGAAGTTGTC
AAGATGGCCAAGGATGCCCAATGGGGGGTTGTGATATCTCAAAGAAGTGGTGAAACTGAA
GACAGTTTCATATCTGATTTATCTGTTGGCTTAGCTACTAGTCAAATTAAAGCTGGTGCC
CCTTGCCGAGGAGAACGACTTGCAAAGTACAACCAGTTGCTTAGAATCGAAGAAGAGCTT
GGTGATCAAGCAGTTTATACTGGTGAAAAGTGGAGGAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052818
PEP Infomation

pacid=37450586 transcript=PGSC0003DMT400078017 locus=PGSC0003DMG400030344 ID=PGSC0003DMT400078017.v4.03 annot-version=v4.03
Sequence

MSVQEYLDKHLLSRRIEDAVNAAVRAKTSDPVLFISNHMRKAVPSVITKVKARQILDSRG
IPTVEVDLHTNKGLFRASAPSGASSGMYEAIELRDGEKGTYLGNSVNRAVKNINEKISVA
LVGMDPTLQSQIDQVMIDLDKTENKSELGANAILAVSIAACKAGAAEKEVSLHKHIADLS
GQTSPLLPVPVFTLISGGKHAGNNLAIKEIMILPVGSSTFEEALQMGSETYHHLKAVITE
TYGAHGCNVGEDGGFTPNISSLRDGLDLVQKAIGRTGYNEKIKIAIGVAATEFCIGTKYD
LDFKTPNKSGQNFKSGQDMIDMYKELCADYPIASIEDPFDKEDWEHVKYFSGLGICQVVG
GDLIMSNPKRIERAIQENSCNSLLLKVNQIGTVTEAIEVVKMAKDAQWGVVISQRSGETE
DSFISDLSVGLATSQIKAGAPCRGERLAKYNQLLRIEEELGDQAVYTGEKWRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400078017
Transcript Infomation

pacid=37450586 locus=PGSC0003DMG400030344 ID=PGSC0003DMT400078017.v4.03 annot-version=v4.03
Sequence

ATGTCGGTGCAAGAATATCTGGATAAGCACTTGCTATCTCGGAGAATCGAAGACGCTGTC
AATGCTGCCGTTAGAGCTAAAACTTCCGATCCCGTCCTCTTCATTTCGAATCACATGAGG
AAAGCTGTACCTTCGGTGATAACTAAGGTGAAAGCCCGGCAGATATTGGATAGTAGAGGG
ATTCCGACCGTCGAAGTTGATTTGCACACTAACAAAGGACTCTTCCGTGCTTCTGCTCCC
AGTGGTGCTTCATCGGGAATGTATGAGGCGATTGAACTGCGTGATGGAGAAAAAGGAACT
TATCTTGGAAATAGTGTGAATAGAGCTGTCAAGAATATTAATGAGAAAATTTCAGTAGCA
TTGGTTGGTATGGATCCAACTCTTCAATCTCAGATTGACCAGGTCATGATAGACTTGGAC
AAAACAGAAAATAAGAGTGAACTTGGAGCGAATGCTATTTTAGCTGTCTCCATAGCTGCT
TGCAAAGCTGGAGCTGCTGAAAAAGAGGTTTCTCTTCACAAACACATTGCTGATCTTTCT
GGTCAAACAAGCCCGCTTCTTCCTGTTCCGGTCTTTACTCTCATAAGTGGAGGAAAACAT
GCTGGAAACAACTTGGCTATTAAGGAGATAATGATTCTTCCAGTGGGATCAAGCACATTT
GAGGAGGCTTTACAAATGGGTTCGGAGACCTATCATCATTTGAAGGCAGTTATTACAGAG
ACATATGGTGCACATGGATGTAATGTTGGTGAAGACGGCGGTTTTACTCCCAACATCTCC
AGCTTAAGAGATGGCTTGGACCTTGTTCAAAAGGCTATTGGGAGAACTGGATACAATGAG
AAAATAAAGATAGCAATTGGTGTTGCTGCCACTGAGTTTTGCATAGGTACAAAATATGAT
CTAGATTTTAAAACTCCAAATAAATCTGGACAAAATTTTAAATCAGGACAGGATATGATT
GATATGTACAAAGAACTGTGCGCAGACTACCCCATAGCATCAATTGAAGATCCATTTGAC
AAGGAGGACTGGGAGCATGTCAAGTACTTTTCGGGTCTTGGAATATGCCAGGTGGTAGGA
GGTGACTTAATAATGTCAAATCCTAAACGGATCGAGAGAGCCATACAAGAGAACTCGTGC
AATTCCCTTCTTCTCAAGGTTAATCAGATTGGTACAGTAACGGAAGCCATTGAAGTTGTC
AAGATGGCCAAGGATGCCCAATGGGGGGTTGTGATATCTCAAAGAAGTGGTGAAACTGAA
GACAGTTTCATATCTGATTTATCTGTTGGCTTAGCTACTAGTCAAATTAAAGCTGGTGCC
CCTTGCCGAGGAGAACGACTTGCAAAGTACAACCAGTTGCTTAGAATCGAAGAAGAGCTT
GGTGATCAAGCAGTTTATACTGGTGAAAAGTGGAGGAACTGA