Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078010
CDS Infomation

pacid=37452621 polypeptide=PGSC0003DMP400052811 locus=PGSC0003DMG400030342 ID=PGSC0003DMT400078010.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGCAGCTTAAGCAGAATGGTGAAAGAAAGAGAATCGAGAATGAGGAGCTTGTT
AAATACATGTCAAGGTTGCCTAGTTATCTTGAAAAGGGGGAAAATCTTCAGGACAAAGCT
TTCAGTGTCGGTGTCCTAGATTGGCGTTTTCTTGAAAAATGGCGACACGATCACGTAAAT
GTACCTTGTAGAAGTAGTGTGTGTTCACCATCAAGCAGCAATACTTTGTCAGTTTCCTCA
ATGGAGGGATCTTCATCCAATTCTAGTAGAGCCCGAAGCTGCTCCCCTGCCCATCGAAGG
ATTCATCGTCTTACACCACAATCATATTATGCATCACCGCTTAAAGGCACTCATCCTGAT
GTCAAATCAGGAAATTGTGGACACTTGAAGAACGTAAAACCAGGAGCAGCTAAATTTCTT
CACGAGAATCAACAGATAAATCTTCTAGAACTCAGGAAAGATCAACACCCACGGAGGGCT
TCACGTGTTAGGAGATCACTTGATGTAGAGACATCACTTGATGTAGAGACACACAAGAGA
ACATCTGGTTCCGAGGGGAATATGAAGTTCCAAGATAGAGAATGTTCTCCAAAAGGAGAG
AATGAGTTAGTAGAATCATGTCATAGGGTTGATGATTTTGATTTCATAGAGAAACATAAA
TCAGATGCCCTTCAAGTACCAGAACCTGGCCAAGAAACTAACAGTTGCACTACTTACTTC
CCACCTGATTCAGTAGCGAGAAACCAGGAAGCGGTGAAACCGAGTAGACAGAGCTTTTCT
TGTGGATTCATTTCTGCATTCTACCATGGGCAGCTCTCTCCTGATATCCCTAGTTCCTGC
CCCCTCCCTCATGTAGCTGGTGAGTCGAGAATGGGACAAGCGAGTTCAATAGATGCAAAG
GATACTAGCTCTTCATCTCAGACAATTCAGCATTCAGCATATCCTGGGAAAAAGGCTCCA
AGCCCACCCAGAGTCAATTACAAACAAGAGAAGAAGTCAACTGCTATGCTAAAGAATCCA
ATTACCCCTAAATCTTCAGAAACTACAAAAGTCAGAAATCCTTCTCCAACTCGTCGTCTT
AGCATGGCAATAGGAAGGATTGGCCAGATTTCTGGTATAAAAGATATGATGACTGTATCA
CAAGGGGTCAAACATCCTGCAGAACAATCTGGTTCAGATAAAGCTCAAACTCCGCCCTCG
CTTGAGACAGGCTGCAATAAATCAGACACCACTAGCCGAGCCAGGACGAGTCCCTTGAGG
AGGTTGCTAGACCCACTTCTGAAGCCAAAGACAGGCAACTGCGATAACGTGACTGGATCA
TCCACAAAACGCGGTGAATCTCCTACAAAACGCTCATTAAAAGTTAAACTGGATTTGAAG
GGTTGTAGATCTATTGATATCGATGATCCACATTCTAAAGGTACACATGCACCATCAACA
TTGCAAGCTCTCCTCCAAGTAGCTGTGAAGAATGGTCTTCCTCTGTTCACATTTGCAGTT
GACAACGAAGTTAACATTTTAGCAGCCACAGTGAAGAAATTTAGTTCGACTTTGAAGGAA
AATAGTTGCTGGATTTACACTTTCTTCACCATTCATGAGACAAAGAGAAAGAGTGGAAGT
TGGTTAAATCAAGCCGGAAAAAACACCGGTGGTGGAATTATGCCTAACGTAGTTGGCAAG
ATGAAGGTTTCTGATGTTTCATTCTCCGAATCAAACAGGCAGAAACTTGACACACAGTTT
AAGACTAGGGAGTTTGTTTTGTTTGCCACAGATGCAAGACATCAGCCAAATGACGAGCTT
GGAGCTATTGTCGTCAAATCACCCAATAGAAGCACTACTTGTCCTAATGGAAGTATCCAT
CAGGATCGCGGCTGCAACAATATTTCAGCCTCAGGCGTAGCAAATCCTTTTGAAGATCTT
AGCATGACAGCTATACTTCCTGGTGGTGCACATAGCCTACCTAATAAAGGGGAGCCTTCT
TCACTGATTGAGAGATGGAAATCAGGTGGATCATGTGATTGTGGTGGATGGGATTTGGGT
TGCCAAATAAGATTACTTGTCAATCATCGAACGATATCCAGTTGTCTCAGCCCCGAACTT
ACTGCTGAAAGATTTGAACTTTTGTCCCAGGGGGGAGAGCAGGACAGCACGCCAATCTTC
AGCTTGTCCCGGTTCAAGGATGGGATCTTTTCAGTTGAATTCAGTTCGTCGTTAAAGCTT
CTGCAGGCATTCTCCATTTGTATAGCAGTTCTAAATGGAAGAAATCAAGAAATCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052811
PEP Infomation

pacid=37452621 transcript=PGSC0003DMT400078010 locus=PGSC0003DMG400030342 ID=PGSC0003DMT400078010.v4.03 annot-version=v4.03
Sequence

MERQLKQNGERKRIENEELVKYMSRLPSYLEKGENLQDKAFSVGVLDWRFLEKWRHDHVN
VPCRSSVCSPSSSNTLSVSSMEGSSSNSSRARSCSPAHRRIHRLTPQSYYASPLKGTHPD
VKSGNCGHLKNVKPGAAKFLHENQQINLLELRKDQHPRRASRVRRSLDVETSLDVETHKR
TSGSEGNMKFQDRECSPKGENELVESCHRVDDFDFIEKHKSDALQVPEPGQETNSCTTYF
PPDSVARNQEAVKPSRQSFSCGFISAFYHGQLSPDIPSSCPLPHVAGESRMGQASSIDAK
DTSSSSQTIQHSAYPGKKAPSPPRVNYKQEKKSTAMLKNPITPKSSETTKVRNPSPTRRL
SMAIGRIGQISGIKDMMTVSQGVKHPAEQSGSDKAQTPPSLETGCNKSDTTSRARTSPLR
RLLDPLLKPKTGNCDNVTGSSTKRGESPTKRSLKVKLDLKGCRSIDIDDPHSKGTHAPST
LQALLQVAVKNGLPLFTFAVDNEVNILAATVKKFSSTLKENSCWIYTFFTIHETKRKSGS
WLNQAGKNTGGGIMPNVVGKMKVSDVSFSESNRQKLDTQFKTREFVLFATDARHQPNDEL
GAIVVKSPNRSTTCPNGSIHQDRGCNNISASGVANPFEDLSMTAILPGGAHSLPNKGEPS
SLIERWKSGGSCDCGGWDLGCQIRLLVNHRTISSCLSPELTAERFELLSQGGEQDSTPIF
SLSRFKDGIFSVEFSSSLKLLQAFSICIAVLNGRNQEIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400078010
Transcript Infomation

pacid=37452621 locus=PGSC0003DMG400030342 ID=PGSC0003DMT400078010.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGCAGCTTAAGCAGAATGGTGAAAGAAAGAGAATCGAGAATGAGGAGCTTGTT
AAATACATGTCAAGGTTGCCTAGTTATCTTGAAAAGGGGGAAAATCTTCAGGACAAAGCT
TTCAGTGTCGGTGTCCTAGATTGGCGTTTTCTTGAAAAATGGCGACACGATCACGTAAAT
GTACCTTGTAGAAGTAGTGTGTGTTCACCATCAAGCAGCAATACTTTGTCAGTTTCCTCA
ATGGAGGGATCTTCATCCAATTCTAGTAGAGCCCGAAGCTGCTCCCCTGCCCATCGAAGG
ATTCATCGTCTTACACCACAATCATATTATGCATCACCGCTTAAAGGCACTCATCCTGAT
GTCAAATCAGGAAATTGTGGACACTTGAAGAACGTAAAACCAGGAGCAGCTAAATTTCTT
CACGAGAATCAACAGATAAATCTTCTAGAACTCAGGAAAGATCAACACCCACGGAGGGCT
TCACGTGTTAGGAGATCACTTGATGTAGAGACATCACTTGATGTAGAGACACACAAGAGA
ACATCTGGTTCCGAGGGGAATATGAAGTTCCAAGATAGAGAATGTTCTCCAAAAGGAGAG
AATGAGTTAGTAGAATCATGTCATAGGGTTGATGATTTTGATTTCATAGAGAAACATAAA
TCAGATGCCCTTCAAGTACCAGAACCTGGCCAAGAAACTAACAGTTGCACTACTTACTTC
CCACCTGATTCAGTAGCGAGAAACCAGGAAGCGGTGAAACCGAGTAGACAGAGCTTTTCT
TGTGGATTCATTTCTGCATTCTACCATGGGCAGCTCTCTCCTGATATCCCTAGTTCCTGC
CCCCTCCCTCATGTAGCTGGTGAGTCGAGAATGGGACAAGCGAGTTCAATAGATGCAAAG
GATACTAGCTCTTCATCTCAGACAATTCAGCATTCAGCATATCCTGGGAAAAAGGCTCCA
AGCCCACCCAGAGTCAATTACAAACAAGAGAAGAAGTCAACTGCTATGCTAAAGAATCCA
ATTACCCCTAAATCTTCAGAAACTACAAAAGTCAGAAATCCTTCTCCAACTCGTCGTCTT
AGCATGGCAATAGGAAGGATTGGCCAGATTTCTGGTATAAAAGATATGATGACTGTATCA
CAAGGGGTCAAACATCCTGCAGAACAATCTGGTTCAGATAAAGCTCAAACTCCGCCCTCG
CTTGAGACAGGCTGCAATAAATCAGACACCACTAGCCGAGCCAGGACGAGTCCCTTGAGG
AGGTTGCTAGACCCACTTCTGAAGCCAAAGACAGGCAACTGCGATAACGTGACTGGATCA
TCCACAAAACGCGGTGAATCTCCTACAAAACGCTCATTAAAAGTTAAACTGGATTTGAAG
GGTTGTAGATCTATTGATATCGATGATCCACATTCTAAAGGTACACATGCACCATCAACA
TTGCAAGCTCTCCTCCAAGTAGCTGTGAAGAATGGTCTTCCTCTGTTCACATTTGCAGTT
GACAACGAAGTTAACATTTTAGCAGCCACAGTGAAGAAATTTAGTTCGACTTTGAAGGAA
AATAGTTGCTGGATTTACACTTTCTTCACCATTCATGAGACAAAGAGAAAGAGTGGAAGT
TGGTTAAATCAAGCCGGAAAAAACACCGGTGGTGGAATTATGCCTAACGTAGTTGGCAAG
ATGAAGGTTTCTGATGTTTCATTCTCCGAATCAAACAGGCAGAAACTTGACACACAGTTT
AAGACTAGGGAGTTTGTTTTGTTTGCCACAGATGCAAGACATCAGCCAAATGACGAGCTT
GGAGCTATTGTCGTCAAATCACCCAATAGAAGCACTACTTGTCCTAATGGAAGTATCCAT
CAGGATCGCGGCTGCAACAATATTTCAGCCTCAGGCGTAGCAAATCCTTTTGAAGATCTT
AGCATGACAGCTATACTTCCTGGTGGTGCACATAGCCTACCTAATAAAGGGGAGCCTTCT
TCACTGATTGAGAGATGGAAATCAGGTGGATCATGTGATTGTGGTGGATGGGATTTGGGT
TGCCAAATAAGATTACTTGTCAATCATCGAACGATATCCAGTTGTCTCAGCCCCGAACTT
ACTGCTGAAAGATTTGAACTTTTGTCCCAGGGGGGAGAGCAGGACAGCACGCCAATCTTC
AGCTTGTCCCGGTTCAAGGATGGGATCTTTTCAGTTGAATTCAGTTCGTCGTTAAAGCTT
CTGCAGGCATTCTCCATTTGTATAGCAGTTCTAAATGGAAGAAATCAAGAAATCTTCTGA