Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077972
CDS Infomation

pacid=37454249 polypeptide=PGSC0003DMP400052780 locus=PGSC0003DMG401030325 ID=PGSC0003DMT400077972.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCGATTCATTCCGTTGTCTGATCCTGTAAACACTCTCGAGTTCGAAGATCAG
ATCAATTTGTCTAGCTATGAGGGGTCTCTGAATCCTCCTCACAGTTATAATGATGACTAT
GTTGCTTTTGGTGTTCCGTATACTGCCCCAAGTGTAGACATTGGTAATTTCCCTCCGTCA
TCAAACGTGAGCTCGGAAGTGGACTCTCCAGATGATCATGACTCTGATTCTCTGTTTAAG
TACCTTAACCAGATACTTATGGAGGAGAATATTGAAGATAAGCCCAGTATGTTTCATGAT
CCGCTTGCTCTAAAAGCTGCTGAGAAGTCCTTATATGAAGCCCTTGGCAAGTCGTACCCT
CCTTCACCCTATCGTACCCCTTATCATGTTGACCATCAGTTCAAAAGCCCAAGCCCTGAC
AGCATTTTCCAGACTTCCAGTGACCATAGTACAAGTAGTAGCAATGCTCATAGTAATTCC
ATGGATCCTCACTGGATTGTTGATCCTGGTGAATCTAGGTTGCCTTTGCCTGTGGAGAGT
CATCCATCAGAGTATTCCATCCAACCTTTGATGCAGAGTAACTCAGAGAGGTCTCATGGT
TCTTTAAACAACATCAACAACTTGAATGTCCATATGGACTCTTTTTTAAATCCTAATGCT
CTTTCAAACATGTTTACTGATAGCGAGTCTATCTTACAGTTCAAGAGAGGGGTGGAGGAA
GCTAATAAATTCCTTCCAAATGTTAGTCAATTTGTTGTTGATTTGGATAAATATACCTTT
CCTCCAAAGGTGGAAGAAGTGACCAAAGAGGCTGTGGTCAAGGTAGAGAAGGATGAGAGG
AATCACTCTCCTAATGGCACTAAAGGAAGAAAACATCAGTATCCTGAGGACAGTGATTTT
GAAGATGAAAGGAGCAACAAACATTCAGCAATATATGTGGAGGAGGAGGCTGAGTTATCA
GAGATGTTTGACAGGGTTCTGCTTTGTACAGATAAAGGTGAGACAATATGTGGTGATGTC
AAGTCTGAAATGCCAGTAGACAATAGTTTAGATCAGAATGGACAAGCACATGGATCAAAT
GGTGGAAAAACTCGTGCTAAGAAACAAGGAACTAAAAATGAAGCTGTGGATCTAAGGACT
CTCTTAGTTAGCTGTGCACAGTCTGTTGCTGCTGACGATCGCAGGACAGCATATGAACAG
CTAAAGCAGATCAGGCAGCATTGTTTTTCCATTGGTGATGCATACCAAAGGCTGGCCAGT
GTATTTGCTGATGGCCTTGAAGCCCGGTTGGCTGGCACTGGCACTCAACTATATGCCGCC
CTTGCTCCTAAAAAGATTACAGCTGCTGAGAAATTGAAAGCATACCAGGTTTATCTTTCG
GCATGCCCGTTCAAGAAAATATCAATATTCTTTGCGAATAAAATGATCTTCCACACAGCA
TCGAATGCCAGGACATTGCATCTCATAGATTTTGGTATACTATATGGTTTCCAGTGGCCA
ATACTCATCCAGCTGCTCTCAGAGATACCTGATGGGCCTCCAAAGCTTCGCATTACTGGC
ATAGACCTTCCCCAACCTGGCTTCAGGCCAGCAGAAAGCTTAGAACAGACAGGGAGCCGC
TTGGCAAAATATTGTGAGCGCTTTAAAGTACCATTTGAATATAATGCCATAGCAACACAG
AATTGGGAGAACATCAAACTTGAGGACTTGAAACTTGTAAGTGGTGAGACTGTTGCTGTG
AACTGTCTTTTTCGTTTTAAGAACCTGTTGGATGAGACAGTGATGTTGGATAGTCCAAGG
GATGCAGTTCTGGGCTTAATTAGAAAGATGAATCCGGATATCTTCGTGCAAGCTGTAATC
AACGGATCTTATAGTGCGCCCTTCTTTGTCACTCGCTTCAGGGAGGCCCTCTTCCATTAC
TCAACTCTCTTTGACATGTTTGATGCTACCTTACCCCGTGATGATCAGCAGAGGTTGCAT
TTTGAACAAGAATTTTACAGACGCGAGGCAATGAATGTCATTGCTTGTGAGGGTTCCGAG
AGAGTTGAGAGGCCTGAGACATACAAGCAATGGCAGGTCCGCAATATGAGGGCTGGATTC
AAGATTCTTCCGTTGAACCAACAACTCGTGCAGAAGTTAAGGTGCAAGGTAAAGGCTGGA
TACCACCGCGATTTTGTGTTTAATGAGGATGGTAAATGGATGTTACAGGGTTGGAAAGGC
CGGGTAGTATGCGCTAGCTCATGTTGGGTGCCAGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400052780
PEP Infomation

pacid=37454249 transcript=PGSC0003DMT400077972 locus=PGSC0003DMG401030325 ID=PGSC0003DMT400077972.v4.03 annot-version=v4.03
Sequence

MDPRFIPLSDPVNTLEFEDQINLSSYEGSLNPPHSYNDDYVAFGVPYTAPSVDIGNFPPS
SNVSSEVDSPDDHDSDSLFKYLNQILMEENIEDKPSMFHDPLALKAAEKSLYEALGKSYP
PSPYRTPYHVDHQFKSPSPDSIFQTSSDHSTSSSNAHSNSMDPHWIVDPGESRLPLPVES
HPSEYSIQPLMQSNSERSHGSLNNINNLNVHMDSFLNPNALSNMFTDSESILQFKRGVEE
ANKFLPNVSQFVVDLDKYTFPPKVEEVTKEAVVKVEKDERNHSPNGTKGRKHQYPEDSDF
EDERSNKHSAIYVEEEAELSEMFDRVLLCTDKGETICGDVKSEMPVDNSLDQNGQAHGSN
GGKTRAKKQGTKNEAVDLRTLLVSCAQSVAADDRRTAYEQLKQIRQHCFSIGDAYQRLAS
VFADGLEARLAGTGTQLYAALAPKKITAAEKLKAYQVYLSACPFKKISIFFANKMIFHTA
SNARTLHLIDFGILYGFQWPILIQLLSEIPDGPPKLRITGIDLPQPGFRPAESLEQTGSR
LAKYCERFKVPFEYNAIATQNWENIKLEDLKLVSGETVAVNCLFRFKNLLDETVMLDSPR
DAVLGLIRKMNPDIFVQAVINGSYSAPFFVTRFREALFHYSTLFDMFDATLPRDDQQRLH
FEQEFYRREAMNVIACEGSERVERPETYKQWQVRNMRAGFKILPLNQQLVQKLRCKVKAG
YHRDFVFNEDGKWMLQGWKGRVVCASSCWVPA*

Transcript Sequence

Transcript ID

PGSC0003DMT400077972
Transcript Infomation

pacid=37454249 locus=PGSC0003DMG401030325 ID=PGSC0003DMT400077972.v4.03 annot-version=v4.03
Sequence

ATGGATCCTCGATTCATTCCGTTGTCTGATCCTGTAAACACTCTCGAGTTCGAAGATCAG
ATCAATTTGTCTAGCTATGAGGGGTCTCTGAATCCTCCTCACAGTTATAATGATGACTAT
GTTGCTTTTGGTGTTCCGTATACTGCCCCAAGTGTAGACATTGGTAATTTCCCTCCGTCA
TCAAACGTGAGCTCGGAAGTGGACTCTCCAGATGATCATGACTCTGATTCTCTGTTTAAG
TACCTTAACCAGATACTTATGGAGGAGAATATTGAAGATAAGCCCAGTATGTTTCATGAT
CCGCTTGCTCTAAAAGCTGCTGAGAAGTCCTTATATGAAGCCCTTGGCAAGTCGTACCCT
CCTTCACCCTATCGTACCCCTTATCATGTTGACCATCAGTTCAAAAGCCCAAGCCCTGAC
AGCATTTTCCAGACTTCCAGTGACCATAGTACAAGTAGTAGCAATGCTCATAGTAATTCC
ATGGATCCTCACTGGATTGTTGATCCTGGTGAATCTAGGTTGCCTTTGCCTGTGGAGAGT
CATCCATCAGAGTATTCCATCCAACCTTTGATGCAGAGTAACTCAGAGAGGTCTCATGGT
TCTTTAAACAACATCAACAACTTGAATGTCCATATGGACTCTTTTTTAAATCCTAATGCT
CTTTCAAACATGTTTACTGATAGCGAGTCTATCTTACAGTTCAAGAGAGGGGTGGAGGAA
GCTAATAAATTCCTTCCAAATGTTAGTCAATTTGTTGTTGATTTGGATAAATATACCTTT
CCTCCAAAGGTGGAAGAAGTGACCAAAGAGGCTGTGGTCAAGGTAGAGAAGGATGAGAGG
AATCACTCTCCTAATGGCACTAAAGGAAGAAAACATCAGTATCCTGAGGACAGTGATTTT
GAAGATGAAAGGAGCAACAAACATTCAGCAATATATGTGGAGGAGGAGGCTGAGTTATCA
GAGATGTTTGACAGGGTTCTGCTTTGTACAGATAAAGGTGAGACAATATGTGGTGATGTC
AAGTCTGAAATGCCAGTAGACAATAGTTTAGATCAGAATGGACAAGCACATGGATCAAAT
GGTGGAAAAACTCGTGCTAAGAAACAAGGAACTAAAAATGAAGCTGTGGATCTAAGGACT
CTCTTAGTTAGCTGTGCACAGTCTGTTGCTGCTGACGATCGCAGGACAGCATATGAACAG
CTAAAGCAGATCAGGCAGCATTGTTTTTCCATTGGTGATGCATACCAAAGGCTGGCCAGT
GTATTTGCTGATGGCCTTGAAGCCCGGTTGGCTGGCACTGGCACTCAACTATATGCCGCC
CTTGCTCCTAAAAAGATTACAGCTGCTGAGAAATTGAAAGCATACCAGGTTTATCTTTCG
GCATGCCCGTTCAAGAAAATATCAATATTCTTTGCGAATAAAATGATCTTCCACACAGCA
TCGAATGCCAGGACATTGCATCTCATAGATTTTGGTATACTATATGGTTTCCAGTGGCCA
ATACTCATCCAGCTGCTCTCAGAGATACCTGATGGGCCTCCAAAGCTTCGCATTACTGGC
ATAGACCTTCCCCAACCTGGCTTCAGGCCAGCAGAAAGCTTAGAACAGACAGGGAGCCGC
TTGGCAAAATATTGTGAGCGCTTTAAAGTACCATTTGAATATAATGCCATAGCAACACAG
AATTGGGAGAACATCAAACTTGAGGACTTGAAACTTGTAAGTGGTGAGACTGTTGCTGTG
AACTGTCTTTTTCGTTTTAAGAACCTGTTGGATGAGACAGTGATGTTGGATAGTCCAAGG
GATGCAGTTCTGGGCTTAATTAGAAAGATGAATCCGGATATCTTCGTGCAAGCTGTAATC
AACGGATCTTATAGTGCGCCCTTCTTTGTCACTCGCTTCAGGGAGGCCCTCTTCCATTAC
TCAACTCTCTTTGACATGTTTGATGCTACCTTACCCCGTGATGATCAGCAGAGGTTGCAT
TTTGAACAAGAATTTTACAGACGCGAGGCAATGAATGTCATTGCTTGTGAGGGTTCCGAG
AGAGTTGAGAGGCCTGAGACATACAAGCAATGGCAGGTCCGCAATATGAGGGCTGGATTC
AAGATTCTTCCGTTGAACCAACAACTCGTGCAGAAGTTAAGGTGCAAGGTAAAGGCTGGA
TACCACCGCGATTTTGTGTTTAATGAGGATGGTAAATGGATGTTACAGGGTTGGAAAGGC
CGGGTAGTATGCGCTAGCTCATGTTGGGTGCCAGCATAG