Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077958
CDS Infomation

pacid=37453638 polypeptide=PGSC0003DMP400052770 locus=PGSC0003DMG400030322 ID=PGSC0003DMT400077958.v4.03 annot-version=v4.03
Sequence

ATGTCTCATAGAAGATCAGGGAAAAGTGGGAGCACTGATTCAGAGTTTGAAGAGCTGAAG
TACAAATACTACAGAGATTTAAGAGATGAAAAGGTCAAAATTAGACGTTCTGGGAAGTAT
TTCAAATGTCCATACTGTCAGGATTCAAGTAAAGAGTATGATTCACAAGAGCTTCTACGG
CATTCTTCCCGCATTGGTAGAGATTCAATAAGTGCTAGTTTTAGAGACAAAGCTAGACAT
TTGGGATTGTTCAAGTACTTGGATAGGTACATAGATGCAGACAAGAACACATCTGAATCA
AGTCAGAGGAGATGTTCTGAGCTATCAGGAAAAGGTTCTCAATATGCCAAGAGTAATCCA
GTAGAGCCATCTCAGTTCACTGAGAAGTCTGAAGGTAGAGGAAATTTTTATCCGTCTGCT
GCTAGGACGATTGAAGCAGTGGATAGACCTGTTGATGGTGCTGAAGAGCCCCTGAGAAGG
GAAAAACTAAATACGGAGAACAGAGTGGTATCCGAATCTCAGATCACTGAGAAGTCTGAA
GGTGGAGGAAATTTTTATCCATCTGCTGCTAGGTCCATTGAAGCAGTGGATAGACCTGTT
GATGGTGCTGAAGAATCCCTGAGAAGGGAAAAACTAAATGCGGAGAACAGAGTGATAACC
GAACCTCCTCCCAGAAGTACTAAAGATGGTCTGCAACCCCAACCTCTCCTAGCATCTAGT
AAGCCAGGTATCAGCAAGGCCAAGGATGATCTAATAGTTTTTCCTTGGATGGGGATAGTA
GCCAATATTCCTGTTGAATATAAGGGAGGGAGGTATGTAGGTAAAAGTGGAACAAATCTA
AAAAAGCTGTGGATTGAGAAAGGGTTTAATCCACTGAAGGTTCATCCTTTGTGGAACTAC
AAGGGTCATACCGGATATGCCATAGTTGAATTTAAAGGGGATTGGTCGGGATTCATGAAT
GCTATAGCATTCGAAAAAGCATTTGAATTAGATAAACATGGGAAGAGAGATTGGAATTCA
GTAAGACGTCCAGATAGTAAATTGTATGCTTGGATTGCACGTGATGAAGATTACAACGCT
GGGTCTTTCATTGGTACTCATCTCCGTAAAAATGGAGATCTTAAGTCAGTTTCTGGAATA
CAAGAAGAGAACAAGAGGAAAGATTCAAGGCTACTATGCACCTTGACCAACGAGTTAGAG
ATGAAGAACAAGGAATGTGAAGAGATGAAGAAGAAAATAAGCAGAGCAGAAGTTTTTATG
GATAATGTGATGAGTCAAAAGGAGGAGATGACCCAAAACTACAATGACGAGATGGAGATG
ATGCGGGATAAAGCATTCAATCAGCTCCATGATTTCATACGTGAGCATGAGAAAAGCAAA
ATGCAACTTGAAGCTCAAAAACAACAATTGATGCAACAAGAACTAGAATTGAGAAAACGT
GAAGCACTGAATGAGAGTGAGAAAAGAAAGCTTCACCTCCAGAAAGAGATGAATGAAAGG
GCAATTTTGGAGCAGAGAAATGCAGATGAGAAAATGCTGCAATTGGCTGAAGATCATAAG
AGAGTAAAGGAACAACTTCATAAAAGAATAATTGAACTGGAAGCGAACCTTGATCAGAAG
CAAGCACTACAGTTGCAGATTGAGCGCTTGAGAGGTTCAATGGAAGTGATGCGACTCATG
AATGAGGAAGGAGACCTCGAATCTAAGAAGAAACTGCAGACAATTCAAGAAGAAATCAAG
GAGAGTGAAGAAGAACTTGATAGCTTGGAAACACTGAATCAAACTCTAATTATAAAGGAA
AGACTTACAAATGATGAGGTGCAGGAAGCCCGTAAAGAACTAATCAATGGTTTAAGGGAG
AGCCGTGCTTTTATCTGTGTCAAGAGAATGGGTGAACTTGATGAGAAGCCATTCCATGCT
GCTGCCAAAATAAAATTTAATCCTGGAGAAGCAGCAGAGAAAGCAGTGGAGGTATGTTCG
TTGTGGGAGGATTACCTGAGGGATCCAAACTGGCATCCTTATAAGGTTATCCAAAAGGGT
CATACTGCTGAGGAAATAATTGATGAAGATGATGAGAAATTGAAGGAACTAAAGGCCGAA
TATGGTGATCAAGTGTATCAATCTGTGGTAACTGCGTTAAACGAGTTGAATGAGCATAAC
CCCAGTGGCAGGTACCCAGTGCCTCAGTTGTGGAATAACAAGGAAAAAAGAACTGCGTCA
TTGAACGAAGGAGTTGCACACATAATGAAGCAGTGGAAGGCGCATAAGAAGAAATTAAGA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400052770
PEP Infomation

pacid=37453638 transcript=PGSC0003DMT400077958 locus=PGSC0003DMG400030322 ID=PGSC0003DMT400077958.v4.03 annot-version=v4.03
Sequence

MSHRRSGKSGSTDSEFEELKYKYYRDLRDEKVKIRRSGKYFKCPYCQDSSKEYDSQELLR
HSSRIGRDSISASFRDKARHLGLFKYLDRYIDADKNTSESSQRRCSELSGKGSQYAKSNP
VEPSQFTEKSEGRGNFYPSAARTIEAVDRPVDGAEEPLRREKLNTENRVVSESQITEKSE
GGGNFYPSAARSIEAVDRPVDGAEESLRREKLNAENRVITEPPPRSTKDGLQPQPLLASS
KPGISKAKDDLIVFPWMGIVANIPVEYKGGRYVGKSGTNLKKLWIEKGFNPLKVHPLWNY
KGHTGYAIVEFKGDWSGFMNAIAFEKAFELDKHGKRDWNSVRRPDSKLYAWIARDEDYNA
GSFIGTHLRKNGDLKSVSGIQEENKRKDSRLLCTLTNELEMKNKECEEMKKKISRAEVFM
DNVMSQKEEMTQNYNDEMEMMRDKAFNQLHDFIREHEKSKMQLEAQKQQLMQQELELRKR
EALNESEKRKLHLQKEMNERAILEQRNADEKMLQLAEDHKRVKEQLHKRIIELEANLDQK
QALQLQIERLRGSMEVMRLMNEEGDLESKKKLQTIQEEIKESEEELDSLETLNQTLIIKE
RLTNDEVQEARKELINGLRESRAFICVKRMGELDEKPFHAAAKIKFNPGEAAEKAVEVCS
LWEDYLRDPNWHPYKVIQKGHTAEEIIDEDDEKLKELKAEYGDQVYQSVVTALNELNEHN
PSGRYPVPQLWNNKEKRTASLNEGVAHIMKQWKAHKKKLR*

Transcript Sequence

Transcript ID

PGSC0003DMT400077958
Transcript Infomation

pacid=37453638 locus=PGSC0003DMG400030322 ID=PGSC0003DMT400077958.v4.03 annot-version=v4.03
Sequence

ATGTCTCATAGAAGATCAGGGAAAAGTGGGAGCACTGATTCAGAGTTTGAAGAGCTGAAG
TACAAATACTACAGAGATTTAAGAGATGAAAAGGTCAAAATTAGACGTTCTGGGAAGTAT
TTCAAATGTCCATACTGTCAGGATTCAAGTAAAGAGTATGATTCACAAGAGCTTCTACGG
CATTCTTCCCGCATTGGTAGAGATTCAATAAGTGCTAGTTTTAGAGACAAAGCTAGACAT
TTGGGATTGTTCAAGTACTTGGATAGGTACATAGATGCAGACAAGAACACATCTGAATCA
AGTCAGAGGAGATGTTCTGAGCTATCAGGAAAAGGTTCTCAATATGCCAAGAGTAATCCA
GTAGAGCCATCTCAGTTCACTGAGAAGTCTGAAGGTAGAGGAAATTTTTATCCGTCTGCT
GCTAGGACGATTGAAGCAGTGGATAGACCTGTTGATGGTGCTGAAGAGCCCCTGAGAAGG
GAAAAACTAAATACGGAGAACAGAGTGGTATCCGAATCTCAGATCACTGAGAAGTCTGAA
GGTGGAGGAAATTTTTATCCATCTGCTGCTAGGTCCATTGAAGCAGTGGATAGACCTGTT
GATGGTGCTGAAGAATCCCTGAGAAGGGAAAAACTAAATGCGGAGAACAGAGTGATAACC
GAACCTCCTCCCAGAAGTACTAAAGATGGTCTGCAACCCCAACCTCTCCTAGCATCTAGT
AAGCCAGGTATCAGCAAGGCCAAGGATGATCTAATAGTTTTTCCTTGGATGGGGATAGTA
GCCAATATTCCTGTTGAATATAAGGGAGGGAGGTATGTAGGTAAAAGTGGAACAAATCTA
AAAAAGCTGTGGATTGAGAAAGGGTTTAATCCACTGAAGGTTCATCCTTTGTGGAACTAC
AAGGGTCATACCGGATATGCCATAGTTGAATTTAAAGGGGATTGGTCGGGATTCATGAAT
GCTATAGCATTCGAAAAAGCATTTGAATTAGATAAACATGGGAAGAGAGATTGGAATTCA
GTAAGACGTCCAGATAGTAAATTGTATGCTTGGATTGCACGTGATGAAGATTACAACGCT
GGGTCTTTCATTGGTACTCATCTCCGTAAAAATGGAGATCTTAAGTCAGTTTCTGGAATA
CAAGAAGAGAACAAGAGGAAAGATTCAAGGCTACTATGCACCTTGACCAACGAGTTAGAG
ATGAAGAACAAGGAATGTGAAGAGATGAAGAAGAAAATAAGCAGAGCAGAAGTTTTTATG
GATAATGTGATGAGTCAAAAGGAGGAGATGACCCAAAACTACAATGACGAGATGGAGATG
ATGCGGGATAAAGCATTCAATCAGCTCCATGATTTCATACGTGAGCATGAGAAAAGCAAA
ATGCAACTTGAAGCTCAAAAACAACAATTGATGCAACAAGAACTAGAATTGAGAAAACGT
GAAGCACTGAATGAGAGTGAGAAAAGAAAGCTTCACCTCCAGAAAGAGATGAATGAAAGG
GCAATTTTGGAGCAGAGAAATGCAGATGAGAAAATGCTGCAATTGGCTGAAGATCATAAG
AGAGTAAAGGAACAACTTCATAAAAGAATAATTGAACTGGAAGCGAACCTTGATCAGAAG
CAAGCACTACAGTTGCAGATTGAGCGCTTGAGAGGTTCAATGGAAGTGATGCGACTCATG
AATGAGGAAGGAGACCTCGAATCTAAGAAGAAACTGCAGACAATTCAAGAAGAAATCAAG
GAGAGTGAAGAAGAACTTGATAGCTTGGAAACACTGAATCAAACTCTAATTATAAAGGAA
AGACTTACAAATGATGAGGTGCAGGAAGCCCGTAAAGAACTAATCAATGGTTTAAGGGAG
AGCCGTGCTTTTATCTGTGTCAAGAGAATGGGTGAACTTGATGAGAAGCCATTCCATGCT
GCTGCCAAAATAAAATTTAATCCTGGAGAAGCAGCAGAGAAAGCAGTGGAGGTATGTTCG
TTGTGGGAGGATTACCTGAGGGATCCAAACTGGCATCCTTATAAGGTTATCCAAAAGGGT
CATACTGCTGAGGAAATAATTGATGAAGATGATGAGAAATTGAAGGAACTAAAGGCCGAA
TATGGTGATCAAGTGTATCAATCTGTGGTAACTGCGTTAAACGAGTTGAATGAGCATAAC
CCCAGTGGCAGGTACCCAGTGCCTCAGTTGTGGAATAACAAGGAAAAAAGAACTGCGTCA
TTGAACGAAGGAGTTGCACACATAATGAAGCAGTGGAAGGCGCATAAGAAGAAATTAAGA
TAA