Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077956
CDS Infomation

pacid=37452067 polypeptide=PGSC0003DMP400052768 locus=PGSC0003DMG400030320 ID=PGSC0003DMT400077956.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAACATGTGGAGTAGGCATGTAGATCATGAAGATGAGCATATTCATCCAGGT
TGTATGATGGGATTCATACATGCCCTTGGCTACAATAGTTGGCACTCTCGCGTAAAGAGG
AAATCTCTGCCCCGTATAAATGATGGAAGCAGTCATATTAGAAGTATTTATTCTTCCAAA
GACAAATTGGTTGGCCAAGATCCTAGTGAACTAGAAATGCTTTTGGATGATAACGAAAGT
CAGTTTTTGGTTGATAAGGGCACTAGAAAATCAAAGGGGTCTAACAAAAGGTCTCTAAAA
GCTAAAATAAAAGATTTGATTGCTGAGGAGATGCATAAGGAAAAAAAGAAGTCCAAGAAG
AAGAAATCAGGCTCTTCTGATCAACCTAAGTTCCAGAGAACTTGTTCAGTTGAACATAGT
GAAAAGAAACAGCCTAGTATTTTGGTTCCCGCGAATGTGGAGGATGAAGAATCACCAGAT
AAGAAACACATGAATGCCATCGATGCATATGATACTTCCACTGATAAGAATGCTCTAAAA
TCTCAGCTTAAAGATCATGCTGAGTTGCTTTTAGAAATTTTGAGGGAATCAGAAGCAGGA
TATCAGAATTTATCCCGGGGTCAGCTGGTTTCAAATAAAAAGGCAAGATTAACAAAGTCA
GGATCATACCCTGTGTCTCATTTGTCGCGGAAAACAAACTTCAAACCAATTAAGCTTGAG
GACAAGAAGAAAGAAGTTTGGTCTTCTGCTAAAGGAGAAAGATTGATAGGTGTTACTCGA
ACGAGATCTTTGTCTAATTATGCAAAGACTCTCTTCACAAGTTTAGGCCTCCTGGATGAT
GATGGTAGGAACTTGAAGCTAGACAAGTCATCGAGCCTTAGTACCAAGGGAGCAGTTGAT
AATAGAGAAAATAACGAAGAGCTAGAAGATGTAGGCACAGACCATCAGAACAAGTCAAAT
GGATATTGTGAGATTGAAGGATTTGACATTAGTAAAAATACAATCATGCACAAGAGAAGT
TCCTCTCTAAACGAGTTCATGAATCGATATACTAAATTATTTGAACATAGTTTTAAGAAG
GAAATGAACTTGTATCCCTCCAAGAGTTTGAAATTGACTAGTGAATACGACATACCACCA
TCAATGTCATTCAGAAGGATCCGTTCTCTATCTTACTCTGAGTCTTGTTCTCTTCTTCCA
AACGGAGTGACTGGTGATATCCATTTTTCAGAATGGCTTGTTAAGACTGTAGAGGAGAGG
AACTCACATATGAGAGGTGAAATTGAGAAAGAAGAGAAATCGATATACGCCACTGAAGAG
ACTGGATACAAAATTGAACAAGTAGAAGGAAGTGAGGATATTAAGATATATGAAGCAGAT
AATGGAGTAGTCGAAGATCTTTCAGAGATCATCGATGAGGTAAAGATGTTCAAAGGAAAC
TCTTATGATGAACAAGAGATAAAATGCAATGAACCAATCCCAATTGATGTGGTTCCAAAT
TCAGAAATTTGTTTTAAAGAAGACATTTCCAGCTATGCAGAGTTCCAAATTTCACAAGGT
TTTGCTCTTAAACAGAATGTTTATATCGATATTCAAGCAAAAGCAGATCATCATGACAAA
TCTTACAGAAAGGAAAACGAGGACTTGTTTTATGTGAGGGATATTCTTGATCATTCAGGT
TTCTCTAGAAATTTCTTCAAGACAACATGGTACTCAGAAGCCCAAGTGTTAAACCCTTCA
TTAGTTAGAGAACTCGAGTCCTTGTGGCATGAAGAAGAAGAAGAATGTTGTCTAGGGGAA
TTCGACTTCTGCTGTCATCATCATCTACTATTTGATTTGGTCAATGAGGTTTTAGTCCAA
ATGTATGACAGATCATTCACATACTACCCTAAGGCCTTATCCTATAGTTGTCGCGTTGCT
CAATTGCTAGAAAATCGAATGAATGAAGAGGTATGCAACAATGTAGGTACCTTGTTGAGG
TTGAAACCAGAGCAGGAATCAATCGACACCATTGTGGATCAAGATTTGAAAATGGATGAT
GGTTGGATGAATCTTCAGTTAGAAAGTGAATGTTTGGCACTTGAACTAGAGGACATGATT
TTTAATGATCTTTTCGAAGAACTTAGATGTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052768
PEP Infomation

pacid=37452067 transcript=PGSC0003DMT400077956 locus=PGSC0003DMG400030320 ID=PGSC0003DMT400077956.v4.03 annot-version=v4.03
Sequence

MGKNMWSRHVDHEDEHIHPGCMMGFIHALGYNSWHSRVKRKSLPRINDGSSHIRSIYSSK
DKLVGQDPSELEMLLDDNESQFLVDKGTRKSKGSNKRSLKAKIKDLIAEEMHKEKKKSKK
KKSGSSDQPKFQRTCSVEHSEKKQPSILVPANVEDEESPDKKHMNAIDAYDTSTDKNALK
SQLKDHAELLLEILRESEAGYQNLSRGQLVSNKKARLTKSGSYPVSHLSRKTNFKPIKLE
DKKKEVWSSAKGERLIGVTRTRSLSNYAKTLFTSLGLLDDDGRNLKLDKSSSLSTKGAVD
NRENNEELEDVGTDHQNKSNGYCEIEGFDISKNTIMHKRSSSLNEFMNRYTKLFEHSFKK
EMNLYPSKSLKLTSEYDIPPSMSFRRIRSLSYSESCSLLPNGVTGDIHFSEWLVKTVEER
NSHMRGEIEKEEKSIYATEETGYKIEQVEGSEDIKIYEADNGVVEDLSEIIDEVKMFKGN
SYDEQEIKCNEPIPIDVVPNSEICFKEDISSYAEFQISQGFALKQNVYIDIQAKADHHDK
SYRKENEDLFYVRDILDHSGFSRNFFKTTWYSEAQVLNPSLVRELESLWHEEEEECCLGE
FDFCCHHHLLFDLVNEVLVQMYDRSFTYYPKALSYSCRVAQLLENRMNEEVCNNVGTLLR
LKPEQESIDTIVDQDLKMDDGWMNLQLESECLALELEDMIFNDLFEELRCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400077956
Transcript Infomation

pacid=37452067 locus=PGSC0003DMG400030320 ID=PGSC0003DMT400077956.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAACATGTGGAGTAGGCATGTAGATCATGAAGATGAGCATATTCATCCAGGT
TGTATGATGGGATTCATACATGCCCTTGGCTACAATAGTTGGCACTCTCGCGTAAAGAGG
AAATCTCTGCCCCGTATAAATGATGGAAGCAGTCATATTAGAAGTATTTATTCTTCCAAA
GACAAATTGGTTGGCCAAGATCCTAGTGAACTAGAAATGCTTTTGGATGATAACGAAAGT
CAGTTTTTGGTTGATAAGGGCACTAGAAAATCAAAGGGGTCTAACAAAAGGTCTCTAAAA
GCTAAAATAAAAGATTTGATTGCTGAGGAGATGCATAAGGAAAAAAAGAAGTCCAAGAAG
AAGAAATCAGGCTCTTCTGATCAACCTAAGTTCCAGAGAACTTGTTCAGTTGAACATAGT
GAAAAGAAACAGCCTAGTATTTTGGTTCCCGCGAATGTGGAGGATGAAGAATCACCAGAT
AAGAAACACATGAATGCCATCGATGCATATGATACTTCCACTGATAAGAATGCTCTAAAA
TCTCAGCTTAAAGATCATGCTGAGTTGCTTTTAGAAATTTTGAGGGAATCAGAAGCAGGA
TATCAGAATTTATCCCGGGGTCAGCTGGTTTCAAATAAAAAGGCAAGATTAACAAAGTCA
GGATCATACCCTGTGTCTCATTTGTCGCGGAAAACAAACTTCAAACCAATTAAGCTTGAG
GACAAGAAGAAAGAAGTTTGGTCTTCTGCTAAAGGAGAAAGATTGATAGGTGTTACTCGA
ACGAGATCTTTGTCTAATTATGCAAAGACTCTCTTCACAAGTTTAGGCCTCCTGGATGAT
GATGGTAGGAACTTGAAGCTAGACAAGTCATCGAGCCTTAGTACCAAGGGAGCAGTTGAT
AATAGAGAAAATAACGAAGAGCTAGAAGATGTAGGCACAGACCATCAGAACAAGTCAAAT
GGATATTGTGAGATTGAAGGATTTGACATTAGTAAAAATACAATCATGCACAAGAGAAGT
TCCTCTCTAAACGAGTTCATGAATCGATATACTAAATTATTTGAACATAGTTTTAAGAAG
GAAATGAACTTGTATCCCTCCAAGAGTTTGAAATTGACTAGTGAATACGACATACCACCA
TCAATGTCATTCAGAAGGATCCGTTCTCTATCTTACTCTGAGTCTTGTTCTCTTCTTCCA
AACGGAGTGACTGGTGATATCCATTTTTCAGAATGGCTTGTTAAGACTGTAGAGGAGAGG
AACTCACATATGAGAGGTGAAATTGAGAAAGAAGAGAAATCGATATACGCCACTGAAGAG
ACTGGATACAAAATTGAACAAGTAGAAGGAAGTGAGGATATTAAGATATATGAAGCAGAT
AATGGAGTAGTCGAAGATCTTTCAGAGATCATCGATGAGGTAAAGATGTTCAAAGGAAAC
TCTTATGATGAACAAGAGATAAAATGCAATGAACCAATCCCAATTGATGTGGTTCCAAAT
TCAGAAATTTGTTTTAAAGAAGACATTTCCAGCTATGCAGAGTTCCAAATTTCACAAGGT
TTTGCTCTTAAACAGAATGTTTATATCGATATTCAAGCAAAAGCAGATCATCATGACAAA
TCTTACAGAAAGGAAAACGAGGACTTGTTTTATGTGAGGGATATTCTTGATCATTCAGGT
TTCTCTAGAAATTTCTTCAAGACAACATGGTACTCAGAAGCCCAAGTGTTAAACCCTTCA
TTAGTTAGAGAACTCGAGTCCTTGTGGCATGAAGAAGAAGAAGAATGTTGTCTAGGGGAA
TTCGACTTCTGCTGTCATCATCATCTACTATTTGATTTGGTCAATGAGGTTTTAGTCCAA
ATGTATGACAGATCATTCACATACTACCCTAAGGCCTTATCCTATAGTTGTCGCGTTGCT
CAATTGCTAGAAAATCGAATGAATGAAGAGGTATGCAACAATGTAGGTACCTTGTTGAGG
TTGAAACCAGAGCAGGAATCAATCGACACCATTGTGGATCAAGATTTGAAAATGGATGAT
GGTTGGATGAATCTTCAGTTAGAAAGTGAATGTTTGGCACTTGAACTAGAGGACATGATT
TTTAATGATCTTTTCGAAGAACTTAGATGTTTTTGA