Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077938
CDS Infomation

pacid=37452871 polypeptide=PGSC0003DMP400052756 locus=PGSC0003DMG402030312 ID=PGSC0003DMT400077938.v4.03 annot-version=v4.03
Sequence

ATGTCTTTCCATGACAAGGACTTTTGGATACCAAAATGTGGTGGACATCTATCTGATGGA
GAAGCTGTTTTTGATAGCTCATCAAGAATCGACGTGAAACGTGCTCACCAATTGTTCTCC
AGTACTGCTGAGGCAGAGTTATTTCCTAATAAGAAACAAGCTGTCCACACTTCACTAGGC
AAATCAACTTCGGAAATTGCAGTGACAAATTCTACATGTTGGGAGACTACTTCTGATCTT
CCGTCAGGGGCAAATCAATTCATTGATAGATTATTTCGAGTTGATACCACCAGGCCGGTC
AACTTGACCGAGAGAAGCACAGGGAACTCCACAATAAGGAAAAAAGTGATCGACGACCAA
ATTGGAGATGATCCATTAGTTGGTTTGTCAATGTCTTACACTATTGAAGAACAACAGATA
TGCATAAGCGACAGTAGAATCAGAAATCTTAATGTTAATCAGGTGGAGGATTCAGAAAAT
GCTTTTCATTCACCGATTGAAAACAACATTAATATGTCTATCAGTCAGGTACATAATAGG
GCAAGTGAAACATCCTTTCTATCCATGGGTCAGGCATATGGGAAGGAAGATGAAAGTCAA
ACCTACAATCCTGGAGATATAAGTAGATCCATCAGATCCAATGTTGAGAAAAGTCACAGC
ACTACACCAATTGCTGACTCATATACCAGAGGGGATTCCGACACAATATTTGGATTTGAA
TTGGTGTCTGATATTGATGCTCTGGCAAGGCCAATTAGCGGTTATGATTATTTACATTAT
CAATCGTCAGTGGACACATCAGAACCACATTGTGACAAGCAGCTGGATGGATCAAATGCT
AAAGCAGTTGATATCTCCTCTCAGACATCAAAACCTAGGACTGATTCCTTGCCAAAAACC
AAATCGGAGTCTAAACCTGCACATAAAGGTGCTCCTAATAGCTTTCCTTCGAATGTTAGA
AGTTTGTTAGCAACAGGAATTCTTGACGGCGTACCTGTAAAATACGTCTTGTCCCGGCAG
GAGCTTCGTGGTATTATAAAAGGTTCTGGATACCTATGTGGTTGTCAACCATGTAACTAT
TCAAAGGTGCTTAACGCCTATGAGTTTGAGCGTCATGCTGGTTGCAAGACAAAGCACCCT
AACAATCACATATACTTTGAGAATGGGAAAACCATCTACCAGATAACCCAGGAGCTAAGG
AGCACGCCACAAAGTTTGTTGTTCGAAGCAATTCAAACCGTGACTGGTTCCCCCATCAAT
CAAAAAGCTTTCCAGATTTGGAAAGAATCATTTCAAGCTGCAACTCGAGAGCTCCAGCGA
ATATATGGGAAGGAAGAATTGAACCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052756
PEP Infomation

pacid=37452871 transcript=PGSC0003DMT400077938 locus=PGSC0003DMG402030312 ID=PGSC0003DMT400077938.v4.03 annot-version=v4.03
Sequence

MSFHDKDFWIPKCGGHLSDGEAVFDSSSRIDVKRAHQLFSSTAEAELFPNKKQAVHTSLG
KSTSEIAVTNSTCWETTSDLPSGANQFIDRLFRVDTTRPVNLTERSTGNSTIRKKVIDDQ
IGDDPLVGLSMSYTIEEQQICISDSRIRNLNVNQVEDSENAFHSPIENNINMSISQVHNR
ASETSFLSMGQAYGKEDESQTYNPGDISRSIRSNVEKSHSTTPIADSYTRGDSDTIFGFE
LVSDIDALARPISGYDYLHYQSSVDTSEPHCDKQLDGSNAKAVDISSQTSKPRTDSLPKT
KSESKPAHKGAPNSFPSNVRSLLATGILDGVPVKYVLSRQELRGIIKGSGYLCGCQPCNY
SKVLNAYEFERHAGCKTKHPNNHIYFENGKTIYQITQELRSTPQSLLFEAIQTVTGSPIN
QKAFQIWKESFQAATRELQRIYGKEELNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400077938
Transcript Infomation

pacid=37452871 locus=PGSC0003DMG402030312 ID=PGSC0003DMT400077938.v4.03 annot-version=v4.03
Sequence

ATGTCTTTCCATGACAAGGACTTTTGGATACCAAAATGTGGTGGACATCTATCTGATGGA
GAAGCTGTTTTTGATAGCTCATCAAGAATCGACGTGAAACGTGCTCACCAATTGTTCTCC
AGTACTGCTGAGGCAGAGTTATTTCCTAATAAGAAACAAGCTGTCCACACTTCACTAGGC
AAATCAACTTCGGAAATTGCAGTGACAAATTCTACATGTTGGGAGACTACTTCTGATCTT
CCGTCAGGGGCAAATCAATTCATTGATAGATTATTTCGAGTTGATACCACCAGGCCGGTC
AACTTGACCGAGAGAAGCACAGGGAACTCCACAATAAGGAAAAAAGTGATCGACGACCAA
ATTGGAGATGATCCATTAGTTGGTTTGTCAATGTCTTACACTATTGAAGAACAACAGATA
TGCATAAGCGACAGTAGAATCAGAAATCTTAATGTTAATCAGGTGGAGGATTCAGAAAAT
GCTTTTCATTCACCGATTGAAAACAACATTAATATGTCTATCAGTCAGGTACATAATAGG
GCAAGTGAAACATCCTTTCTATCCATGGGTCAGGCATATGGGAAGGAAGATGAAAGTCAA
ACCTACAATCCTGGAGATATAAGTAGATCCATCAGATCCAATGTTGAGAAAAGTCACAGC
ACTACACCAATTGCTGACTCATATACCAGAGGGGATTCCGACACAATATTTGGATTTGAA
TTGGTGTCTGATATTGATGCTCTGGCAAGGCCAATTAGCGGTTATGATTATTTACATTAT
CAATCGTCAGTGGACACATCAGAACCACATTGTGACAAGCAGCTGGATGGATCAAATGCT
AAAGCAGTTGATATCTCCTCTCAGACATCAAAACCTAGGACTGATTCCTTGCCAAAAACC
AAATCGGAGTCTAAACCTGCACATAAAGGTGCTCCTAATAGCTTTCCTTCGAATGTTAGA
AGTTTGTTAGCAACAGGAATTCTTGACGGCGTACCTGTAAAATACGTCTTGTCCCGGCAG
GAGCTTCGTGGTATTATAAAAGGTTCTGGATACCTATGTGGTTGTCAACCATGTAACTAT
TCAAAGGTGCTTAACGCCTATGAGTTTGAGCGTCATGCTGGTTGCAAGACAAAGCACCCT
AACAATCACATATACTTTGAGAATGGGAAAACCATCTACCAGATAACCCAGGAGCTAAGG
AGCACGCCACAAAGTTTGTTGTTCGAAGCAATTCAAACCGTGACTGGTTCCCCCATCAAT
CAAAAAGCTTTCCAGATTTGGAAAGAATCATTTCAAGCTGCAACTCGAGAGCTCCAGCGA
ATATATGGGAAGGAAGAATTGAACCTGTAA