Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077925
CDS Infomation

pacid=37450832 polypeptide=PGSC0003DMP400052745 locus=PGSC0003DMG400030307 ID=PGSC0003DMT400077925.v4.03 annot-version=v4.03
Sequence

ATGTGGAGGAATAACGAGAGAGTCTACATGTCTCCGGCGAGGGGTTTCTTGACCCCACCA
CCGAAATGGAGGTCGCCGGCGTCAGACAAGGACCAGAGGTGGCCAACTCATGCACAGAGT
GCTAAAGCTGATCTTTTTCACGTCATTCACAAAGTGCCTTCTGGTGATTCTCCATATGTC
AGGGCGAAACATGTTCAATTAATTGATAAGGATCCAGGCAAGGCAATTTCTCTGTTCTGG
GCAGCAATTAATTCCGGTGATCGAGTTGATAGTGCTCTGAAAGACATGGCAGTGGTAATG
AAACAGTTGGATCGTTCAGACGAGGCCATCGAAGCAATAAAGTCATTTCGAAATCTTTGT
CCCTCTGAGTCTCAGGAGTCCATTGACAACATCTTGATTGAACTCTACAAGAGATCTGGT
AGGCTCGAAGAAGAGATTGAATTACTTGAACTGAAATTGAAGAACGTTGAAGAAGGCATA
GCATTTGGTGGGAAGAGGACTAAGATTGCTAGATCTCAAGGAAAAAAGGTTCAAATCACA
ATTGAAAAGGAGTACGCGAGATTGTTGGGGAACTTGGCATGGTCATACATGCAACTGAAT
AACTTTAAATTGGCAGAGGAGTACTATAGAAAAGCACTCTCTCTCGAATCGGACAAGAAC
AAGCAAAGCAATCTTGCAATCTGTTTGATGCACATGAACAAGATTGCAGAAGCTAGGTTT
CTGCTTCAAAGCATAAAAGCCTCAGATAGATGGCAAATGGATGAGTCATGCACCAAGTCC
TTCGAACGTGCCACTCAAATGCTAGCTGAGTTAGAAACTCATGGCATTCAGAACTCTAAG
GAACAGGTGGAAGAGATGCGGGAGGTTAGGATAGATTCATCCACATCAGATGAACATGAT
TGCAGGGGACACGAGAAGACACATCCACCTCCATTTACTGCTTCTGGACCTCCAAAGCAC
TTTTTAACACAACCAAGAAGATATTCATGTTCACTCAATGATGGAGGTTGGTTGAATAAG
GACTCTGTTAGTGCATGTAGTCGAAGATTGTTATTTGAGCAAACATCAAATAATGAGAAT
GTGCAGTTAGTTGTGAATCATAATTTCAACAAGCTCATTTCTGCCAACGATATGAGCGAG
GGAGCATCCCTTGTACGTGGACAAGTGTTAACTAGGTCATGGGGAAATGGCGCTAACGTG
GAAAGTGAATGTGATTTGCAGCCACCTTACTCCAAATGGAAAAACAACTCTTCCGGAAAT
GATGGATCAGACCAAATTTCTTTAGAGTTGTCGAAGTCTCCAACAGAATCATTGGCTGAT
ATTACAAGTGCAAGAAAATATTCTGGAGATGGGAGTAAAGATTGTTGGAGTTCCACTTTG
ACTTATAGAGATACGGTGACATTAGAGGATACCACCGAACACTTGGAGAGCACAAACTTG
AAACCTTTAAACTTGCCTGCATGTACAAGCAAGAAGAGTTGGGCTGATATGGTGGAAGAG
GATGAGTTGGGTTTACAATTTCATGAAACTCCAGGCAAATATTCAGATGAAAATGAGAAT
ATTGATTCAAATATTATTAATCTTAGCCAAAACATTGATACATTGCGTCTGAATGAAGGG
TATCATACACAACCTGGACGAGAAGCAAGGCGTTCCTTGTGCTTTGATCAGAATGACAGA
AAAGAAAAGTGTTCATCTGACTTTCAGGGGAAAGTGCTCAAGTCTGGAAGCTTGAACTCC
TTGCCCCCTATAGGAGACATTGCTTATCAAACTCCAGTCACGTTGATGCGGAGGAACAGA
TTGCAAGTATTCAGAGATATAACTCCTGAAAGTCCTAAACCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052745
PEP Infomation

pacid=37450832 transcript=PGSC0003DMT400077925 locus=PGSC0003DMG400030307 ID=PGSC0003DMT400077925.v4.03 annot-version=v4.03
Sequence

MWRNNERVYMSPARGFLTPPPKWRSPASDKDQRWPTHAQSAKADLFHVIHKVPSGDSPYV
RAKHVQLIDKDPGKAISLFWAAINSGDRVDSALKDMAVVMKQLDRSDEAIEAIKSFRNLC
PSESQESIDNILIELYKRSGRLEEEIELLELKLKNVEEGIAFGGKRTKIARSQGKKVQIT
IEKEYARLLGNLAWSYMQLNNFKLAEEYYRKALSLESDKNKQSNLAICLMHMNKIAEARF
LLQSIKASDRWQMDESCTKSFERATQMLAELETHGIQNSKEQVEEMREVRIDSSTSDEHD
CRGHEKTHPPPFTASGPPKHFLTQPRRYSCSLNDGGWLNKDSVSACSRRLLFEQTSNNEN
VQLVVNHNFNKLISANDMSEGASLVRGQVLTRSWGNGANVESECDLQPPYSKWKNNSSGN
DGSDQISLELSKSPTESLADITSARKYSGDGSKDCWSSTLTYRDTVTLEDTTEHLESTNL
KPLNLPACTSKKSWADMVEEDELGLQFHETPGKYSDENENIDSNIINLSQNIDTLRLNEG
YHTQPGREARRSLCFDQNDRKEKCSSDFQGKVLKSGSLNSLPPIGDIAYQTPVTLMRRNR
LQVFRDITPESPKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400077925
Transcript Infomation

pacid=37450832 locus=PGSC0003DMG400030307 ID=PGSC0003DMT400077925.v4.03 annot-version=v4.03
Sequence

ATGTGGAGGAATAACGAGAGAGTCTACATGTCTCCGGCGAGGGGTTTCTTGACCCCACCA
CCGAAATGGAGGTCGCCGGCGTCAGACAAGGACCAGAGGTGGCCAACTCATGCACAGAGT
GCTAAAGCTGATCTTTTTCACGTCATTCACAAAGTGCCTTCTGGTGATTCTCCATATGTC
AGGGCGAAACATGTTCAATTAATTGATAAGGATCCAGGCAAGGCAATTTCTCTGTTCTGG
GCAGCAATTAATTCCGGTGATCGAGTTGATAGTGCTCTGAAAGACATGGCAGTGGTAATG
AAACAGTTGGATCGTTCAGACGAGGCCATCGAAGCAATAAAGTCATTTCGAAATCTTTGT
CCCTCTGAGTCTCAGGAGTCCATTGACAACATCTTGATTGAACTCTACAAGAGATCTGGT
AGGCTCGAAGAAGAGATTGAATTACTTGAACTGAAATTGAAGAACGTTGAAGAAGGCATA
GCATTTGGTGGGAAGAGGACTAAGATTGCTAGATCTCAAGGAAAAAAGGTTCAAATCACA
ATTGAAAAGGAGTACGCGAGATTGTTGGGGAACTTGGCATGGTCATACATGCAACTGAAT
AACTTTAAATTGGCAGAGGAGTACTATAGAAAAGCACTCTCTCTCGAATCGGACAAGAAC
AAGCAAAGCAATCTTGCAATCTGTTTGATGCACATGAACAAGATTGCAGAAGCTAGGTTT
CTGCTTCAAAGCATAAAAGCCTCAGATAGATGGCAAATGGATGAGTCATGCACCAAGTCC
TTCGAACGTGCCACTCAAATGCTAGCTGAGTTAGAAACTCATGGCATTCAGAACTCTAAG
GAACAGGTGGAAGAGATGCGGGAGGTTAGGATAGATTCATCCACATCAGATGAACATGAT
TGCAGGGGACACGAGAAGACACATCCACCTCCATTTACTGCTTCTGGACCTCCAAAGCAC
TTTTTAACACAACCAAGAAGATATTCATGTTCACTCAATGATGGAGGTTGGTTGAATAAG
GACTCTGTTAGTGCATGTAGTCGAAGATTGTTATTTGAGCAAACATCAAATAATGAGAAT
GTGCAGTTAGTTGTGAATCATAATTTCAACAAGCTCATTTCTGCCAACGATATGAGCGAG
GGAGCATCCCTTGTACGTGGACAAGTGTTAACTAGGTCATGGGGAAATGGCGCTAACGTG
GAAAGTGAATGTGATTTGCAGCCACCTTACTCCAAATGGAAAAACAACTCTTCCGGAAAT
GATGGATCAGACCAAATTTCTTTAGAGTTGTCGAAGTCTCCAACAGAATCATTGGCTGAT
ATTACAAGTGCAAGAAAATATTCTGGAGATGGGAGTAAAGATTGTTGGAGTTCCACTTTG
ACTTATAGAGATACGGTGACATTAGAGGATACCACCGAACACTTGGAGAGCACAAACTTG
AAACCTTTAAACTTGCCTGCATGTACAAGCAAGAAGAGTTGGGCTGATATGGTGGAAGAG
GATGAGTTGGGTTTACAATTTCATGAAACTCCAGGCAAATATTCAGATGAAAATGAGAAT
ATTGATTCAAATATTATTAATCTTAGCCAAAACATTGATACATTGCGTCTGAATGAAGGG
TATCATACACAACCTGGACGAGAAGCAAGGCGTTCCTTGTGCTTTGATCAGAATGACAGA
AAAGAAAAGTGTTCATCTGACTTTCAGGGGAAAGTGCTCAAGTCTGGAAGCTTGAACTCC
TTGCCCCCTATAGGAGACATTGCTTATCAAACTCCAGTCACGTTGATGCGGAGGAACAGA
TTGCAAGTATTCAGAGATATAACTCCTGAAAGTCCTAAACCTTGA