Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077849
CDS Infomation

pacid=37438869 polypeptide=PGSC0003DMP400052715 locus=PGSC0003DMG400030284 ID=PGSC0003DMT400077849.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGGAGGCACAAATGTCAATCCATTGGCAGCAACAGGTGGTTCAACAACAGTG
AGGCAGGTGAAGCTGGAAAAAGAATGCGAGCTCCGAGTTGAAGCCAGCGCTGACTCACCC
CTCCGTCTTCGGCTCCTAACTGGCACGGCTGAGATTTTTGGGACTGAAATCCCTCCTGGA
ATCTGGCTCAACTTCCCTCCAAGACTTAAATTTGCAGTTTTTACTTGGTATGGAGCCACA
ATCGAGATGGACGGTTCCACTGAAACTGATTATACAGCAGATGAGACGCCGATGATAAGC
TATATTAATGTCCATGCTGTACTTGATGGACGAAGAAATCGTGCCAAAGCTTCGCCTAGT
GATTCTGACACTTCTCAGGGCCCAAGAGTTATCGTTGTGGGACCTACAGATTCTGGCAAG
AGTACTCTGTCAAGGATGCTTCTTAGTTGGGCTGCGAAACAGGGATGGAAACCTACTTTT
GTTGATTTGGACATAGGTCAAGGATCGATAACTATTCCAGGATGTGTTGCTGCTACACCA
ATCGAGTTGCCTATTGATCCAGTTGAAGGAATTCCACTTGAGATGCCTATGGTCTACTTC
TTTGGCCATGTGACTCCTAGTGCCAACATAGATCACTACAAGGTACTCGTCAAGGAGCTA
GCTCAGACTTTGGAGACACAATTTTCTGGCAATGCTGAATCTCGAGCTTCAGGCATGGTA
ATAAATACAATGGGATGGATAGAGGGAGTTGGTTATGAGTTGCTACTCCATGCGATTGAT
ACATTCAATGCCACAGTTATTCTTGTCTTGGGTCAGGAAAAACTTTGCAGCATGCTAAAA
GATGTATTGAAGAATCGACCTAACGTGGATGTGGTGAAACTTCAAAAATCTGGGGGTGTT
GTATCAAGGAATGCAAAAGTACGGCAGAAAGCAAGGGGCTACAGAATACGGGAATATTTT
TATGGCCCTTCGAATGATCTCTCACCACATTCTAATGTGGTGAACTTCAGTGACTTGTTC
ATCTATCGAATAGGGGGTGGACCACAAGCTCCACGCTCAGCTTTACCTATTGGTGCAGAG
CCTTCTGCAGATCCTACAAGATTGGTTCCTGTTAGTATCAGCCGAGATTTGCTCCATTTG
GTTCTTGCTGTCTCATATGCCAAAGAACAAGATCAAATAATTTCCAGGAAAAAGATTACA
TACCTTGCACCATGTGCTGGAGAACTTCCGAGCAAAAACCTAATCGTGGGAACCTTAACA
TGGATCGAAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052715
PEP Infomation

pacid=37438869 transcript=PGSC0003DMT400077849 locus=PGSC0003DMG400030284 ID=PGSC0003DMT400077849.v4.03 annot-version=v4.03
Sequence

MAYGGTNVNPLAATGGSTTVRQVKLEKECELRVEASADSPLRLRLLTGTAEIFGTEIPPG
IWLNFPPRLKFAVFTWYGATIEMDGSTETDYTADETPMISYINVHAVLDGRRNRAKASPS
DSDTSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCVAATP
IELPIDPVEGIPLEMPMVYFFGHVTPSANIDHYKVLVKELAQTLETQFSGNAESRASGMV
INTMGWIEGVGYELLLHAIDTFNATVILVLGQEKLCSMLKDVLKNRPNVDVVKLQKSGGV
VSRNAKVRQKARGYRIREYFYGPSNDLSPHSNVVNFSDLFIYRIGGGPQAPRSALPIGAE
PSADPTRLVPVSISRDLLHLVLAVSYAKEQDQIISRKKITYLAPCAGELPSKNLIVGTLT
WIEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400077849
Transcript Infomation

pacid=37438869 locus=PGSC0003DMG400030284 ID=PGSC0003DMT400077849.v4.03 annot-version=v4.03
Sequence

ATGGCTTATGGAGGCACAAATGTCAATCCATTGGCAGCAACAGGTGGTTCAACAACAGTG
AGGCAGGTGAAGCTGGAAAAAGAATGCGAGCTCCGAGTTGAAGCCAGCGCTGACTCACCC
CTCCGTCTTCGGCTCCTAACTGGCACGGCTGAGATTTTTGGGACTGAAATCCCTCCTGGA
ATCTGGCTCAACTTCCCTCCAAGACTTAAATTTGCAGTTTTTACTTGGTATGGAGCCACA
ATCGAGATGGACGGTTCCACTGAAACTGATTATACAGCAGATGAGACGCCGATGATAAGC
TATATTAATGTCCATGCTGTACTTGATGGACGAAGAAATCGTGCCAAAGCTTCGCCTAGT
GATTCTGACACTTCTCAGGGCCCAAGAGTTATCGTTGTGGGACCTACAGATTCTGGCAAG
AGTACTCTGTCAAGGATGCTTCTTAGTTGGGCTGCGAAACAGGGATGGAAACCTACTTTT
GTTGATTTGGACATAGGTCAAGGATCGATAACTATTCCAGGATGTGTTGCTGCTACACCA
ATCGAGTTGCCTATTGATCCAGTTGAAGGAATTCCACTTGAGATGCCTATGGTCTACTTC
TTTGGCCATGTGACTCCTAGTGCCAACATAGATCACTACAAGGTACTCGTCAAGGAGCTA
GCTCAGACTTTGGAGACACAATTTTCTGGCAATGCTGAATCTCGAGCTTCAGGCATGGTA
ATAAATACAATGGGATGGATAGAGGGAGTTGGTTATGAGTTGCTACTCCATGCGATTGAT
ACATTCAATGCCACAGTTATTCTTGTCTTGGGTCAGGAAAAACTTTGCAGCATGCTAAAA
GATGTATTGAAGAATCGACCTAACGTGGATGTGGTGAAACTTCAAAAATCTGGGGGTGTT
GTATCAAGGAATGCAAAAGTACGGCAGAAAGCAAGGGGCTACAGAATACGGGAATATTTT
TATGGCCCTTCGAATGATCTCTCACCACATTCTAATGTGGTGAACTTCAGTGACTTGTTC
ATCTATCGAATAGGGGGTGGACCACAAGCTCCACGCTCAGCTTTACCTATTGGTGCAGAG
CCTTCTGCAGATCCTACAAGATTGGTTCCTGTTAGTATCAGCCGAGATTTGCTCCATTTG
GTTCTTGCTGTCTCATATGCCAAAGAACAAGATCAAATAATTTCCAGGAAAAAGATTACA
TACCTTGCACCATGTGCTGGAGAACTTCCGAGCAAAAACCTAATCGTGGGAACCTTAACA
TGGATCGAAAACTGA