Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077736
CDS Infomation

pacid=37466279 polypeptide=PGSC0003DMP400052645 locus=PGSC0003DMG400030239 ID=PGSC0003DMT400077736.v4.03 annot-version=v4.03
Sequence

ATGGATGGTGAGAAATTCTTTATGCATGACCTTGTCAATGATCTTGCCCAAATTGCATCT
TCAAAACACTGTACCAGGTTGGAAGACATCGAAGGATCTCATATGTTGGAACGAACTCGA
CACTTGTCATATATCACGGGTGATAGTAACCTTTTGTCATTTTCAGGAGGAGATGGTGAT
TTTGGTAAATTGAAAACCCTCCACAAATTGGAGCAATTAAGGACATTGCTTCCGATAAAT
TTCCAGCACCATTGGTGTTCAGTTAATCTAAGCAAGAGGGTGCTGCATAACATACTTCCA
AGACTAACATTCTTAAGGGCATTGTCATTTTCTGGTTATTACATCAAGGATGTACCGAAT
GACTTATTTATCAAATTAAAACTCCTAAGATTTTTGGACCTTTCTTGGACACATATAAAA
CAGTTACCAGATTCAATTTGTGTGTTGTACAACTTAGAGACACTTATCGTGTCGTCTTGT
TTTGATCTTGAGGAGTTACCGCTGCAGATGGGAAATTTGATCAACTTGCGTTACCTTGAC
ATTAGGCACTGTTCTCGGTTGAAGATGCCGCTACATCCTAGCAAGTTGAAAAGCCTCCAG
GTGCTATTAGGAGTTACATGTCTTCCAAGTGGTTTGAAACTCAAAGATTTGGGTGAACAA
TGCAACTTGTATGGATCTCTATCAATTGTAGAGTTGCGAAATGTGGTTGATAGAAGGGAA
GCTCTGAAGGCAAACATGAGGGAAAAGGAACATATTAAGAGGTTATCATTGTCGTGGGGT
ATAAGTATTGCTGAGAATTCACAAACTGAAAGAGACATACTCGATGAACTACAACCAAAC
ACAAACATACAAGACCTGGAAATCTCTGGATATAGAGGGACAAAATTTTCGAACTGGCTG
GCTGATTATTCCTATCTTAAGCTGGAGACGTTGTCTCTTAGCCACTGCAACAACTGTGAT
TCCTTGCCAGCACTAGGACAACTTCCATCTTTGAAAGTCCTCACCATTGGGTATATAGAT
CGAATAACAGAGGTGACCGAAGAATTCTATGGTAGCCCATCTTCAATAAAGCCATTTAAC
TCTCTGGAATTGCTTGGATTTAATCGGATGAACGGGTGGAAGCAATGGCATGTACTAGGA
AGAGGAGAGTTCCCTGCACTTCAGAACCTTTCAATTGAAGGCTGTCCCAAGTTGATGGGG
AAGTTGCCTGGAAATCTTTGTTCTTTGACCGGATTGTCAATTTCAGATTGTCCGAAATTC
ATTTTGGAGACACCTATCCAACTTTCAAATCTAAAAAGGTTTAAAGTTGCTGGTTCTTTA
AAGGTTGGAGTTCTTTTTGATCATGCTGAGCTATTTGCATCCCAACTTCAAGGAATGATG
CAGCTAGAGTCATTAATTATCAGTTGGTGTTACGGTCTTACCTCCTTGCATATTAGCAGT
CTGTCGAAAACCTTGAAGAAAATAAAAATAGATTATTGTCAGAAATTGAAATTGGAGCCG
TCAGCTAGTGAGATGTTTCTCGAGAGACTGGAACTAAGTGGATGTAATTCTATAAATGAT
ATATCACCTGAGTTGGTCCCAAGAGCACACTATTTGAGTGTAAATAGGTGCCATAGCCTC
ACTAGGCTTTTGATTCCTACTGGGACTGAAGATCTCCGTATTTCTGAATGTGAAAGTCTT
GAAATACTTTTGGTGGCATCCAGGACTCCAACGTTGTTGCGAAAAATGAAAATTCACCGC
TGTGAGAAGCTGAAGTCGCTGCCAGAACATATGCAAAAACTTCTTCCATCTCTTAGTCAT
CTCTTCCTGCAATCTTGTCCAGAAATAAAGTCCTTCCCTGAAGGAGGGTTGCCCTTCAGT
CTAGAATTCCTTGAGATCGAATTTTGCGATAAACTGGAGAATGATCGAAAGGAGTGGCAT
TTACAGAGACTCCCTTGTCTCAGAAAACTTCACATCCTCCATGATGGTTCTGATGAAGGG
ATTCATTGGGAGTTGCCTTGCTCTATTCGAAAGCTGTTGGTTAGATTTATGACAGCTAGG
ATTAGAGCAGTTCACAAGATAATTATTCTAGAATCAGTTAGAAGGTTAGAAAGTTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052645
PEP Infomation

pacid=37466279 transcript=PGSC0003DMT400077736 locus=PGSC0003DMG400030239 ID=PGSC0003DMT400077736.v4.03 annot-version=v4.03
Sequence

MDGEKFFMHDLVNDLAQIASSKHCTRLEDIEGSHMLERTRHLSYITGDSNLLSFSGGDGD
FGKLKTLHKLEQLRTLLPINFQHHWCSVNLSKRVLHNILPRLTFLRALSFSGYYIKDVPN
DLFIKLKLLRFLDLSWTHIKQLPDSICVLYNLETLIVSSCFDLEELPLQMGNLINLRYLD
IRHCSRLKMPLHPSKLKSLQVLLGVTCLPSGLKLKDLGEQCNLYGSLSIVELRNVVDRRE
ALKANMREKEHIKRLSLSWGISIAENSQTERDILDELQPNTNIQDLEISGYRGTKFSNWL
ADYSYLKLETLSLSHCNNCDSLPALGQLPSLKVLTIGYIDRITEVTEEFYGSPSSIKPFN
SLELLGFNRMNGWKQWHVLGRGEFPALQNLSIEGCPKLMGKLPGNLCSLTGLSISDCPKF
ILETPIQLSNLKRFKVAGSLKVGVLFDHAELFASQLQGMMQLESLIISWCYGLTSLHISS
LSKTLKKIKIDYCQKLKLEPSASEMFLERLELSGCNSINDISPELVPRAHYLSVNRCHSL
TRLLIPTGTEDLRISECESLEILLVASRTPTLLRKMKIHRCEKLKSLPEHMQKLLPSLSH
LFLQSCPEIKSFPEGGLPFSLEFLEIEFCDKLENDRKEWHLQRLPCLRKLHILHDGSDEG
IHWELPCSIRKLLVRFMTARIRAVHKIIILESVRRLESC*

Transcript Sequence

Transcript ID

PGSC0003DMT400077736
Transcript Infomation

pacid=37466279 locus=PGSC0003DMG400030239 ID=PGSC0003DMT400077736.v4.03 annot-version=v4.03
Sequence

ATGGATGGTGAGAAATTCTTTATGCATGACCTTGTCAATGATCTTGCCCAAATTGCATCT
TCAAAACACTGTACCAGGTTGGAAGACATCGAAGGATCTCATATGTTGGAACGAACTCGA
CACTTGTCATATATCACGGGTGATAGTAACCTTTTGTCATTTTCAGGAGGAGATGGTGAT
TTTGGTAAATTGAAAACCCTCCACAAATTGGAGCAATTAAGGACATTGCTTCCGATAAAT
TTCCAGCACCATTGGTGTTCAGTTAATCTAAGCAAGAGGGTGCTGCATAACATACTTCCA
AGACTAACATTCTTAAGGGCATTGTCATTTTCTGGTTATTACATCAAGGATGTACCGAAT
GACTTATTTATCAAATTAAAACTCCTAAGATTTTTGGACCTTTCTTGGACACATATAAAA
CAGTTACCAGATTCAATTTGTGTGTTGTACAACTTAGAGACACTTATCGTGTCGTCTTGT
TTTGATCTTGAGGAGTTACCGCTGCAGATGGGAAATTTGATCAACTTGCGTTACCTTGAC
ATTAGGCACTGTTCTCGGTTGAAGATGCCGCTACATCCTAGCAAGTTGAAAAGCCTCCAG
GTGCTATTAGGAGTTACATGTCTTCCAAGTGGTTTGAAACTCAAAGATTTGGGTGAACAA
TGCAACTTGTATGGATCTCTATCAATTGTAGAGTTGCGAAATGTGGTTGATAGAAGGGAA
GCTCTGAAGGCAAACATGAGGGAAAAGGAACATATTAAGAGGTTATCATTGTCGTGGGGT
ATAAGTATTGCTGAGAATTCACAAACTGAAAGAGACATACTCGATGAACTACAACCAAAC
ACAAACATACAAGACCTGGAAATCTCTGGATATAGAGGGACAAAATTTTCGAACTGGCTG
GCTGATTATTCCTATCTTAAGCTGGAGACGTTGTCTCTTAGCCACTGCAACAACTGTGAT
TCCTTGCCAGCACTAGGACAACTTCCATCTTTGAAAGTCCTCACCATTGGGTATATAGAT
CGAATAACAGAGGTGACCGAAGAATTCTATGGTAGCCCATCTTCAATAAAGCCATTTAAC
TCTCTGGAATTGCTTGGATTTAATCGGATGAACGGGTGGAAGCAATGGCATGTACTAGGA
AGAGGAGAGTTCCCTGCACTTCAGAACCTTTCAATTGAAGGCTGTCCCAAGTTGATGGGG
AAGTTGCCTGGAAATCTTTGTTCTTTGACCGGATTGTCAATTTCAGATTGTCCGAAATTC
ATTTTGGAGACACCTATCCAACTTTCAAATCTAAAAAGGTTTAAAGTTGCTGGTTCTTTA
AAGGTTGGAGTTCTTTTTGATCATGCTGAGCTATTTGCATCCCAACTTCAAGGAATGATG
CAGCTAGAGTCATTAATTATCAGTTGGTGTTACGGTCTTACCTCCTTGCATATTAGCAGT
CTGTCGAAAACCTTGAAGAAAATAAAAATAGATTATTGTCAGAAATTGAAATTGGAGCCG
TCAGCTAGTGAGATGTTTCTCGAGAGACTGGAACTAAGTGGATGTAATTCTATAAATGAT
ATATCACCTGAGTTGGTCCCAAGAGCACACTATTTGAGTGTAAATAGGTGCCATAGCCTC
ACTAGGCTTTTGATTCCTACTGGGACTGAAGATCTCCGTATTTCTGAATGTGAAAGTCTT
GAAATACTTTTGGTGGCATCCAGGACTCCAACGTTGTTGCGAAAAATGAAAATTCACCGC
TGTGAGAAGCTGAAGTCGCTGCCAGAACATATGCAAAAACTTCTTCCATCTCTTAGTCAT
CTCTTCCTGCAATCTTGTCCAGAAATAAAGTCCTTCCCTGAAGGAGGGTTGCCCTTCAGT
CTAGAATTCCTTGAGATCGAATTTTGCGATAAACTGGAGAATGATCGAAAGGAGTGGCAT
TTACAGAGACTCCCTTGTCTCAGAAAACTTCACATCCTCCATGATGGTTCTGATGAAGGG
ATTCATTGGGAGTTGCCTTGCTCTATTCGAAAGCTGTTGGTTAGATTTATGACAGCTAGG
ATTAGAGCAGTTCACAAGATAATTATTCTAGAATCAGTTAGAAGGTTAGAAAGTTGTTAG