Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077674
CDS Infomation

pacid=37434613 polypeptide=PGSC0003DMP400052610 locus=PGSC0003DMG400030220 ID=PGSC0003DMT400077674.v4.03 annot-version=v4.03
Sequence

ATGCAGAGGTCACGACATCAACGGTCAAAGTCCTCCAGACCCACAACCATTCACGGGTTC
GCTCAATCTGGGGATCTGCTTGCCTTTCAAAAGATGCTTTCTGGCAACCCTTCTCTTCTC
AATGAACGTAACCCTGTTATGGTGCAGACACCACTTCATGTTGCTGCTGGTTACAATAAT
GTTGAAATACTCAAGTTTTTGCTTGGTTGGTCTGGCCCAGAAAAGGTGGATATGGAAGCC
AAGAATATGTACGGAGAGACCCCTTTGCACATGGCAGCCAAGAATGGGTGTAATGAAGCT
GCAAAGAAGCTTCTTGCTTATGGTGCCCTTGTTGAAGCCAAAGCAAACAATGGGATGACT
CCATTGCATCTTGCTGTTTGGCACTCGCTACGAGCTGAAGACTGTTGTACGGTCAAGACA
TTGTTAGAGCAGGATGCTAATTGTAGTGCCGAAGACAATGAGGGCATGACTCCTATAAAT
CATCTCTCTCAAGGACCTGGCAATGAAAAATTGCAAGAACTTCTCAATCGGCATCTTGAA
GAACAAAGAAAACGTAAAGCTATTGAAGCATGTGGCCAGACAAAAGCAAAAATGGATGAA
CTTGAAAATGAATTGTCTAAAATAGTGGGCTTACATGAGCTTAAGCAGCAACTCCGCAAA
TGGGCAAAGGGGATGCTCTTGGATGAGCGGCGTCAGGCCCTAGGTCTTAAAGTTGGTGCA
AGAAGACCACCCCATATGGCTTTTCTTGGAAACCCTGGAACAGGGAAAACTATGGTTGCT
AGGATTCTTGGGAAGTTACTTCATATGGTAGGAATTCTTCCAACCGACAAGGTGATGGAA
GTGCAGAGAACAGACCTGGTTGGTGAATTTGTTGGTCATACAGGACCAAAGACGAGAAGA
AAAATCCAAGAAGCTGAAGGGGGGATTCTTTTTGTTGATGAAGCCTATAGATTAATACCT
ATGCAGAAGTCCGATGACAAGGATTATGGTTTGGAAGCTCTAGAGGAGATAATGTCTGTC
ATGGACAGTGGGAAAATTGTAGTCATTTTTGCAGGCTATAGCGAGCCAATGAAGCGTGTA
ATCTCCTCTAATGAAGGCTTTTGCAGAAGAGTTACAAAGTTCTTTCATTTTGAAAACTTT
AGTTCGAAGGATCTAGCTAAAATTTATCATCTTAAAATGACCAATCAAGCTGATAGCAGC
TTGTTATACGGATTTAAGTTGAGTCCTTCATGTAGTATTGATGCTGTTGCAGCACTTATC
GCGGAAGAAACCACTGAAAAACAGCGCAAGGAGATGAATGGAGGTCTAGTGGATCCAATG
CTTGTTAATGCAAGAGAAAATTTGGATTTGAGACTCAGTTTCGAGTGTATAGACTCGGAT
GAGCTACTTACAATCACATTAGAGGACTTAAAAGTTGGTTTGCAATTGCTGTCAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400052610
PEP Infomation

pacid=37434613 transcript=PGSC0003DMT400077674 locus=PGSC0003DMG400030220 ID=PGSC0003DMT400077674.v4.03 annot-version=v4.03
Sequence

MQRSRHQRSKSSRPTTIHGFAQSGDLLAFQKMLSGNPSLLNERNPVMVQTPLHVAAGYNN
VEILKFLLGWSGPEKVDMEAKNMYGETPLHMAAKNGCNEAAKKLLAYGALVEAKANNGMT
PLHLAVWHSLRAEDCCTVKTLLEQDANCSAEDNEGMTPINHLSQGPGNEKLQELLNRHLE
EQRKRKAIEACGQTKAKMDELENELSKIVGLHELKQQLRKWAKGMLLDERRQALGLKVGA
RRPPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVMEVQRTDLVGEFVGHTGPKTRR
KIQEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSEPMKRV
ISSNEGFCRRVTKFFHFENFSSKDLAKIYHLKMTNQADSSLLYGFKLSPSCSIDAVAALI
AEETTEKQRKEMNGGLVDPMLVNARENLDLRLSFECIDSDELLTITLEDLKVGLQLLSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400077674
Transcript Infomation

pacid=37434613 locus=PGSC0003DMG400030220 ID=PGSC0003DMT400077674.v4.03 annot-version=v4.03
Sequence

ATGCAGAGGTCACGACATCAACGGTCAAAGTCCTCCAGACCCACAACCATTCACGGGTTC
GCTCAATCTGGGGATCTGCTTGCCTTTCAAAAGATGCTTTCTGGCAACCCTTCTCTTCTC
AATGAACGTAACCCTGTTATGGTGCAGACACCACTTCATGTTGCTGCTGGTTACAATAAT
GTTGAAATACTCAAGTTTTTGCTTGGTTGGTCTGGCCCAGAAAAGGTGGATATGGAAGCC
AAGAATATGTACGGAGAGACCCCTTTGCACATGGCAGCCAAGAATGGGTGTAATGAAGCT
GCAAAGAAGCTTCTTGCTTATGGTGCCCTTGTTGAAGCCAAAGCAAACAATGGGATGACT
CCATTGCATCTTGCTGTTTGGCACTCGCTACGAGCTGAAGACTGTTGTACGGTCAAGACA
TTGTTAGAGCAGGATGCTAATTGTAGTGCCGAAGACAATGAGGGCATGACTCCTATAAAT
CATCTCTCTCAAGGACCTGGCAATGAAAAATTGCAAGAACTTCTCAATCGGCATCTTGAA
GAACAAAGAAAACGTAAAGCTATTGAAGCATGTGGCCAGACAAAAGCAAAAATGGATGAA
CTTGAAAATGAATTGTCTAAAATAGTGGGCTTACATGAGCTTAAGCAGCAACTCCGCAAA
TGGGCAAAGGGGATGCTCTTGGATGAGCGGCGTCAGGCCCTAGGTCTTAAAGTTGGTGCA
AGAAGACCACCCCATATGGCTTTTCTTGGAAACCCTGGAACAGGGAAAACTATGGTTGCT
AGGATTCTTGGGAAGTTACTTCATATGGTAGGAATTCTTCCAACCGACAAGGTGATGGAA
GTGCAGAGAACAGACCTGGTTGGTGAATTTGTTGGTCATACAGGACCAAAGACGAGAAGA
AAAATCCAAGAAGCTGAAGGGGGGATTCTTTTTGTTGATGAAGCCTATAGATTAATACCT
ATGCAGAAGTCCGATGACAAGGATTATGGTTTGGAAGCTCTAGAGGAGATAATGTCTGTC
ATGGACAGTGGGAAAATTGTAGTCATTTTTGCAGGCTATAGCGAGCCAATGAAGCGTGTA
ATCTCCTCTAATGAAGGCTTTTGCAGAAGAGTTACAAAGTTCTTTCATTTTGAAAACTTT
AGTTCGAAGGATCTAGCTAAAATTTATCATCTTAAAATGACCAATCAAGCTGATAGCAGC
TTGTTATACGGATTTAAGTTGAGTCCTTCATGTAGTATTGATGCTGTTGCAGCACTTATC
GCGGAAGAAACCACTGAAAAACAGCGCAAGGAGATGAATGGAGGTCTAGTGGATCCAATG
CTTGTTAATGCAAGAGAAAATTTGGATTTGAGACTCAGTTTCGAGTGTATAGACTCGGAT
GAGCTACTTACAATCACATTAGAGGACTTAAAAGTTGGTTTGCAATTGCTGTCAAAATGA