Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077648
CDS Infomation

pacid=37466276 polypeptide=PGSC0003DMP400052593 locus=PGSC0003DMG400030212 ID=PGSC0003DMT400077648.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTGTTGAAAACAGGCAGTTCACTCACCTTGAACCGGGTTTATCAGGCGTC
GGCCGTAATTTCAAGCCTAGGCCTGATTCCCCGGTTCGTGGTTGCAACTTCCCTCCGTCA
TCCAACCATGAACTCCCTTTCCAAAAACAACAAAATCTCCCCATTTACCTTGATTACTCG
TCTAGTGAAGACGAAGATGACGATGACGAAAAAAATGAATACGTTCAAATGATCAAAAAA
GGTAAAACTGAATTAGAACCATCAATTCACGATACTAGAGACGAAGGTACCGCTGATAAT
TGGATCCAACGAAACTTTTCCTTAATACGTCTCACCGGTAAACACCCATTCAACTCCGAA
CCCCCTTTGGCTCGACTTATGCATCACGGTTTCATCACCCCAGTCCCACTTCATTACGTC
CGTAACCATGGCCCCGTCCCCAAAGCCTCCTGGTCTGACTGGAGCGTCGAAGTTACCGGG
CTAGTAAAACGACCAATGAAATTCACAATGGATCAGCTGGTTAACGAATTTCCTTCACGT
GAATTGCCTGTCACACTTGTATGCGCTGGCAATCGTCGGAAAGAGCAGAATATGGTTAAG
CAGACAATTGGTTTCAACTGGGGCGCTGCTGCCGTTTCAACTACCGTATGGCGCGGAGTA
CCCCTCCGCGCCTTATTGAAACGGTGCGGTGTTCATAGTAAGAAAAAAGGCGCGCTTAAC
ATCTGTTTCGAAGGTTCAGATGTTTTACCTGGAGGTGGAGGTTCAAAGTACGGAACGAGT
ATAAAGAAGGAATTCGCCATGGATCCATCTCGTGATATTATTGTAGCTTACATGCAAAAC
GGAGAAATGTTGAGCCCGGACCATGGGTTTCCGGTAAGGATGATTATTCCGGGATTCATA
GGTGGAAGAATGGTGAAATGGTTAAAGAGGATTGTAGTCACTACACAAGAATCTGAAAGC
TATTATCACTACAAGGATAATAGAGTTCTCCCTCCACATGTTGACGCTGAACTTGCTAAC
GCTGAAGCATGGTGGTACAAACCAGAGTACATCATCAATGAGCTCAACATCAACTCTGTC
ATTACAACTCCGTGCCATGAAGAAATTTTGCCTATTAATGCGTGGACTACTCAGCGACCT
TACACGTTGAGAGGCTATGCTTATTCTGGTGGAGGTAAAAAGGTAACTCGAGTGGAAGTG
ACTTTGGATGGAGGAGAGACATGGAGTGTGTGTACACTTGATCACCCAGAGAAGCCAACT
AAGTATGGCAAGTACTGGTGTTGGTGCTTTTGGTCACTCGAGGTTGAGGTGCTCGACTTG
CTTAGTGCTAAAGAAATTGCTGTACGAGCTATCGATGAGACCCACAATACTCAACCCGAG
AAGCTTATTTGGAACGTCATGGGAATGATGAACAATTGTTGGTTTCGAGTGAAGATGAAT
GTGTGCAAGCCTCACAAGGGAGAGATTGGTATAGTGTTTGAGCACCCGACCCAACCTGGA
AACCAATCAGGTGGATGGATGGCAAAGGAGAGACACTTGGAGATATCAGCAGTGGCTCCT
CCAACACTAAAGAAGAGTATTTCAACTCCTTTCATGAACACAGCTTCGAAGATGTATTCC
ATGTCTGAGGTGAGGAAGCACAACTCTTCAGACTCTGCTTGGATCATAGTCCATGGACAT
ATCTACGATGCCTCACGTTTCTTGAAAGACCATCCTGGTGGTGTTGACAGCATTCTCATC
AATGCTGGAACTGATTGTACTGAGGAATTTGATGCAATTCATTCTGATAAGGCTAAGAAA
CTATTGGAGGACTTTAGGATTGGTGAACTCATAACTACTGGTTACACGTCTGATTCGTCT
CCAAACACTTCTGTCCATGGATCCTCTTCCATTAGTAGCTTCTTAGCACCTATTAAGGAA
CTTGTTCAAACACCAACAAGGAGTGTAGCTCTCATCCCAAGGGAAAAAATCCCTTGCAAA
CTCGTCGACAAGCAATCCATCTCCCATGATGTTAGAAAATTCAAATTTGCATTACCCTCT
GAGGATCAAGTCTTAGGCTTACCTGTTGGCAAACACATTTTCCTCTGTGCCACAGTTGAT
GACAAACTCTGCATGCGTGCCTACACGCCTACTAGCACAGTCGATGAAGTAGGGTTCTTC
GAGTTGGTTGTCAAAATCTACTTCAAAGGTGTTCACCCTAAATTCCCTAATGGAGGTCAA
ATGTCACAACATCTTGATTCTCTCCCAATAGGTGCATTCCTCGACGTTAAAGGTCCATTA
GGTCACATTGAATATCAAGGCAAGGGTAATTTCTTAGTCCATGGTAAACAAAAGTTTGCC
AAGAAGTTAGCTATGATAGCTGGTGGAACAGGTATAACTCCTGTATATCAAGTAATGCAA
TCAATTTTGAAAGATCCAGAAGACGACACAGAAATGTATGTGGTGTATGCAAACAGAACA
GAGGACGATATTTTGCTCAAAGAGGAACTCGATGCATGGGCAGAGCAAATCCCAGATAGA
GTTAAAGTTTGGTATGTCGTTCAAGAATCAATTACAGAAGGATGGAAGTATAGTACAGGA
TTTGTTACAGAAGCAATTCTCAGAGAACATATACCTCAACCATCTCATACAACATTGGCA
TTAGCATGTGGACCACCTCCTATGATACAATTTGCTATTAATCCAAACTTGGAGAAAATG
GGATATGACATTAAGGAGGAATTATTGGTGTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052593
PEP Infomation

pacid=37466276 transcript=PGSC0003DMT400077648 locus=PGSC0003DMG400030212 ID=PGSC0003DMT400077648.v4.03 annot-version=v4.03
Sequence

MAASVENRQFTHLEPGLSGVGRNFKPRPDSPVRGCNFPPSSNHELPFQKQQNLPIYLDYS
SSEDEDDDDEKNEYVQMIKKGKTELEPSIHDTRDEGTADNWIQRNFSLIRLTGKHPFNSE
PPLARLMHHGFITPVPLHYVRNHGPVPKASWSDWSVEVTGLVKRPMKFTMDQLVNEFPSR
ELPVTLVCAGNRRKEQNMVKQTIGFNWGAAAVSTTVWRGVPLRALLKRCGVHSKKKGALN
ICFEGSDVLPGGGGSKYGTSIKKEFAMDPSRDIIVAYMQNGEMLSPDHGFPVRMIIPGFI
GGRMVKWLKRIVVTTQESESYYHYKDNRVLPPHVDAELANAEAWWYKPEYIINELNINSV
ITTPCHEEILPINAWTTQRPYTLRGYAYSGGGKKVTRVEVTLDGGETWSVCTLDHPEKPT
KYGKYWCWCFWSLEVEVLDLLSAKEIAVRAIDETHNTQPEKLIWNVMGMMNNCWFRVKMN
VCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEISAVAPPTLKKSISTPFMNTASKMYS
MSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAIHSDKAKK
LLEDFRIGELITTGYTSDSSPNTSVHGSSSISSFLAPIKELVQTPTRSVALIPREKIPCK
LVDKQSISHDVRKFKFALPSEDQVLGLPVGKHIFLCATVDDKLCMRAYTPTSTVDEVGFF
ELVVKIYFKGVHPKFPNGGQMSQHLDSLPIGAFLDVKGPLGHIEYQGKGNFLVHGKQKFA
KKLAMIAGGTGITPVYQVMQSILKDPEDDTEMYVVYANRTEDDILLKEELDAWAEQIPDR
VKVWYVVQESITEGWKYSTGFVTEAILREHIPQPSHTTLALACGPPPMIQFAINPNLEKM
GYDIKEELLVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400077648
Transcript Infomation

pacid=37466276 locus=PGSC0003DMG400030212 ID=PGSC0003DMT400077648.v4.03 annot-version=v4.03
Sequence

ATGGCGGCATCTGTTGAAAACAGGCAGTTCACTCACCTTGAACCGGGTTTATCAGGCGTC
GGCCGTAATTTCAAGCCTAGGCCTGATTCCCCGGTTCGTGGTTGCAACTTCCCTCCGTCA
TCCAACCATGAACTCCCTTTCCAAAAACAACAAAATCTCCCCATTTACCTTGATTACTCG
TCTAGTGAAGACGAAGATGACGATGACGAAAAAAATGAATACGTTCAAATGATCAAAAAA
GGTAAAACTGAATTAGAACCATCAATTCACGATACTAGAGACGAAGGTACCGCTGATAAT
TGGATCCAACGAAACTTTTCCTTAATACGTCTCACCGGTAAACACCCATTCAACTCCGAA
CCCCCTTTGGCTCGACTTATGCATCACGGTTTCATCACCCCAGTCCCACTTCATTACGTC
CGTAACCATGGCCCCGTCCCCAAAGCCTCCTGGTCTGACTGGAGCGTCGAAGTTACCGGG
CTAGTAAAACGACCAATGAAATTCACAATGGATCAGCTGGTTAACGAATTTCCTTCACGT
GAATTGCCTGTCACACTTGTATGCGCTGGCAATCGTCGGAAAGAGCAGAATATGGTTAAG
CAGACAATTGGTTTCAACTGGGGCGCTGCTGCCGTTTCAACTACCGTATGGCGCGGAGTA
CCCCTCCGCGCCTTATTGAAACGGTGCGGTGTTCATAGTAAGAAAAAAGGCGCGCTTAAC
ATCTGTTTCGAAGGTTCAGATGTTTTACCTGGAGGTGGAGGTTCAAAGTACGGAACGAGT
ATAAAGAAGGAATTCGCCATGGATCCATCTCGTGATATTATTGTAGCTTACATGCAAAAC
GGAGAAATGTTGAGCCCGGACCATGGGTTTCCGGTAAGGATGATTATTCCGGGATTCATA
GGTGGAAGAATGGTGAAATGGTTAAAGAGGATTGTAGTCACTACACAAGAATCTGAAAGC
TATTATCACTACAAGGATAATAGAGTTCTCCCTCCACATGTTGACGCTGAACTTGCTAAC
GCTGAAGCATGGTGGTACAAACCAGAGTACATCATCAATGAGCTCAACATCAACTCTGTC
ATTACAACTCCGTGCCATGAAGAAATTTTGCCTATTAATGCGTGGACTACTCAGCGACCT
TACACGTTGAGAGGCTATGCTTATTCTGGTGGAGGTAAAAAGGTAACTCGAGTGGAAGTG
ACTTTGGATGGAGGAGAGACATGGAGTGTGTGTACACTTGATCACCCAGAGAAGCCAACT
AAGTATGGCAAGTACTGGTGTTGGTGCTTTTGGTCACTCGAGGTTGAGGTGCTCGACTTG
CTTAGTGCTAAAGAAATTGCTGTACGAGCTATCGATGAGACCCACAATACTCAACCCGAG
AAGCTTATTTGGAACGTCATGGGAATGATGAACAATTGTTGGTTTCGAGTGAAGATGAAT
GTGTGCAAGCCTCACAAGGGAGAGATTGGTATAGTGTTTGAGCACCCGACCCAACCTGGA
AACCAATCAGGTGGATGGATGGCAAAGGAGAGACACTTGGAGATATCAGCAGTGGCTCCT
CCAACACTAAAGAAGAGTATTTCAACTCCTTTCATGAACACAGCTTCGAAGATGTATTCC
ATGTCTGAGGTGAGGAAGCACAACTCTTCAGACTCTGCTTGGATCATAGTCCATGGACAT
ATCTACGATGCCTCACGTTTCTTGAAAGACCATCCTGGTGGTGTTGACAGCATTCTCATC
AATGCTGGAACTGATTGTACTGAGGAATTTGATGCAATTCATTCTGATAAGGCTAAGAAA
CTATTGGAGGACTTTAGGATTGGTGAACTCATAACTACTGGTTACACGTCTGATTCGTCT
CCAAACACTTCTGTCCATGGATCCTCTTCCATTAGTAGCTTCTTAGCACCTATTAAGGAA
CTTGTTCAAACACCAACAAGGAGTGTAGCTCTCATCCCAAGGGAAAAAATCCCTTGCAAA
CTCGTCGACAAGCAATCCATCTCCCATGATGTTAGAAAATTCAAATTTGCATTACCCTCT
GAGGATCAAGTCTTAGGCTTACCTGTTGGCAAACACATTTTCCTCTGTGCCACAGTTGAT
GACAAACTCTGCATGCGTGCCTACACGCCTACTAGCACAGTCGATGAAGTAGGGTTCTTC
GAGTTGGTTGTCAAAATCTACTTCAAAGGTGTTCACCCTAAATTCCCTAATGGAGGTCAA
ATGTCACAACATCTTGATTCTCTCCCAATAGGTGCATTCCTCGACGTTAAAGGTCCATTA
GGTCACATTGAATATCAAGGCAAGGGTAATTTCTTAGTCCATGGTAAACAAAAGTTTGCC
AAGAAGTTAGCTATGATAGCTGGTGGAACAGGTATAACTCCTGTATATCAAGTAATGCAA
TCAATTTTGAAAGATCCAGAAGACGACACAGAAATGTATGTGGTGTATGCAAACAGAACA
GAGGACGATATTTTGCTCAAAGAGGAACTCGATGCATGGGCAGAGCAAATCCCAGATAGA
GTTAAAGTTTGGTATGTCGTTCAAGAATCAATTACAGAAGGATGGAAGTATAGTACAGGA
TTTGTTACAGAAGCAATTCTCAGAGAACATATACCTCAACCATCTCATACAACATTGGCA
TTAGCATGTGGACCACCTCCTATGATACAATTTGCTATTAATCCAAACTTGGAGAAAATG
GGATATGACATTAAGGAGGAATTATTGGTGTTCTAA