Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077638
CDS Infomation

pacid=37465495 polypeptide=PGSC0003DMP400052585 locus=PGSC0003DMG400030206 ID=PGSC0003DMT400077638.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGAGTGAACCAGCGTTAGTTCCAGAATGGTTGAGAAGCACTGGAAGTGTTACT
GGGGGTGGCTCTTCAAGTCCCCACTTTGCAACCTCTTCTTTGCATTCAGATGTTACTTTA
TCCACACTGTCTTCTCGCAATAGATCTCCTAGGAGTGTTAGTGACAAAGATAGCCCGCGT
TCTGTGTTTTTGGATCGCAGTTCATCATCAAATTCTAGGCGTAGCTCTAGCGGTACTAGT
TCGAAGCATCCGTACAGTAGTTTTAATAGAAATCATCGTGATAAAAATCGGGAAAGAGAG
AAAGAAAGACCGGGTACTGTTGATCTATGGGATCATGACACATCTGATCCTCTGGGGAAC
ATCTTAGCTGGTAGAGTTGATAAGAACAGCTTGAGGCGCTCTCAGTCGCTGGTGTCCAGG
AAACCTGGTGAGTTCTTGCCCCGCAGGACTGAGGACTCGAAAGGTGGTATTAGTAGCACC
CATAGTAGTGGCAATGGTATTCATTCTGGGGGAAGTAGTAGTTTTAACGGTAACCAGAAG
GCAGCATTTGAGAAAGATTTTCCTTCTCTTGGGATTGAAGAGAGGCAGGTAACCAGAGTT
TCATCGCCTGGTTTGAGCTCAGCAGTCCAAAGTTTGCCAATTGGAAACTCGGCTTTGCTT
GGTGCTGATAAATGGACCTCAGCATTGGCAGAGGTGCCTCCTATAATTGGCAGCATCGGT
ATGGGGAGCTCAGCTTCTCAACAAAGTGTTGCTGTAGCTCCAACACCTAGGGCTTTAAGT
GGGACAGCTAGTCTGAACATGGCTGAAGCATTGTCGCAAGCACCGCCGCGCGCTCGTTCC
ACCATGCAGATCCCTGATAAGACACAGAGGCTTGAGGAATTAGCTATAAAGCAATCCAGA
CAGTTGATACCTGTGATACCTTCAATGCCTAAAGTTTCGGTATCCAGTTCTGCTGATAAA
TCAAAGCAACCAAAATCCATAGCTAGGACAAATGAGATGGTTGGAATAACTAAGAGTATG
CAACAACCTTTTTCCTCTCAACTTGCTAATCAGGCTCGTAGTGGACAAGTCAGAGCGGAA
GCTCCAGCTACCTCTCATGGCAAAACTCTTCTGGTTTTGAAGTCAGGACGGGAAAATGGT
GTCACCTCTTTGTCAAAAGAAGCATCAACTCCAGCTAACAACACTGGCAATAGACTAGCT
AATTGCCCTCCTGCAGTGGCTCCTTCAGCTCCTGCTGTGACCAGTCCAACTTCAAGGGTA
ACTTCCCTTGAAACCAAGGCTGCTGCATTGTCACTGAAGCCACGGTCTACTGCAGAGAAG
AGATCTTCTCTGTCTCAAGCCCAAAGCAGGAGTGATTTTTTCAATCTAATGAGGAAGAAG
ACTTCAAATTCTTCTACTGCCCTTCCAGACTCTGGTATGGCTTCATCTAACAGTAGGGAG
CAGTCTTGTCTCAAAACTAAAGATGAGGATAGTGCCTCTTTGAGTCCTTGTGTTTCTGAA
AATGGAAGTGAGAGAACCAGCAATGGAGACCCTCATGAAGCTCAAAACCATGTTCAAAGA
CATAATGATGTTGAGGAGAACAACTCGCCCATAAATGGATCGGTATATCCAGATGAAAAA
GAGGCTGCTTTCCTACGTTCTCTTGGTTGGGATGAAAATGCCGTGGAAGAGGAAGGCCTG
ACAGAGGAAGAGATTAATGCTTTTTATCAGGAGTACATGAAACTGAAGCCATCCTTGAAG
GTTTACAAAGGTGCCCAGCCAAAGTGTTTGATGCTGCCTGAGTTGCACTTGGCTACTAAT
CCTGGAACTGCCTCTTCCAATTCGACTTCATCTGAATCTGATGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052585
PEP Infomation

pacid=37465495 transcript=PGSC0003DMT400077638 locus=PGSC0003DMG400030206 ID=PGSC0003DMT400077638.v4.03 annot-version=v4.03
Sequence

MERSEPALVPEWLRSTGSVTGGGSSSPHFATSSLHSDVTLSTLSSRNRSPRSVSDKDSPR
SVFLDRSSSSNSRRSSSGTSSKHPYSSFNRNHRDKNREREKERPGTVDLWDHDTSDPLGN
ILAGRVDKNSLRRSQSLVSRKPGEFLPRRTEDSKGGISSTHSSGNGIHSGGSSSFNGNQK
AAFEKDFPSLGIEERQVTRVSSPGLSSAVQSLPIGNSALLGADKWTSALAEVPPIIGSIG
MGSSASQQSVAVAPTPRALSGTASLNMAEALSQAPPRARSTMQIPDKTQRLEELAIKQSR
QLIPVIPSMPKVSVSSSADKSKQPKSIARTNEMVGITKSMQQPFSSQLANQARSGQVRAE
APATSHGKTLLVLKSGRENGVTSLSKEASTPANNTGNRLANCPPAVAPSAPAVTSPTSRV
TSLETKAAALSLKPRSTAEKRSSLSQAQSRSDFFNLMRKKTSNSSTALPDSGMASSNSRE
QSCLKTKDEDSASLSPCVSENGSERTSNGDPHEAQNHVQRHNDVEENNSPINGSVYPDEK
EAAFLRSLGWDENAVEEEGLTEEEINAFYQEYMKLKPSLKVYKGAQPKCLMLPELHLATN
PGTASSNSTSSESDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400077638
Transcript Infomation

pacid=37465495 locus=PGSC0003DMG400030206 ID=PGSC0003DMT400077638.v4.03 annot-version=v4.03
Sequence

ATGGAAAGGAGTGAACCAGCGTTAGTTCCAGAATGGTTGAGAAGCACTGGAAGTGTTACT
GGGGGTGGCTCTTCAAGTCCCCACTTTGCAACCTCTTCTTTGCATTCAGATGTTACTTTA
TCCACACTGTCTTCTCGCAATAGATCTCCTAGGAGTGTTAGTGACAAAGATAGCCCGCGT
TCTGTGTTTTTGGATCGCAGTTCATCATCAAATTCTAGGCGTAGCTCTAGCGGTACTAGT
TCGAAGCATCCGTACAGTAGTTTTAATAGAAATCATCGTGATAAAAATCGGGAAAGAGAG
AAAGAAAGACCGGGTACTGTTGATCTATGGGATCATGACACATCTGATCCTCTGGGGAAC
ATCTTAGCTGGTAGAGTTGATAAGAACAGCTTGAGGCGCTCTCAGTCGCTGGTGTCCAGG
AAACCTGGTGAGTTCTTGCCCCGCAGGACTGAGGACTCGAAAGGTGGTATTAGTAGCACC
CATAGTAGTGGCAATGGTATTCATTCTGGGGGAAGTAGTAGTTTTAACGGTAACCAGAAG
GCAGCATTTGAGAAAGATTTTCCTTCTCTTGGGATTGAAGAGAGGCAGGTAACCAGAGTT
TCATCGCCTGGTTTGAGCTCAGCAGTCCAAAGTTTGCCAATTGGAAACTCGGCTTTGCTT
GGTGCTGATAAATGGACCTCAGCATTGGCAGAGGTGCCTCCTATAATTGGCAGCATCGGT
ATGGGGAGCTCAGCTTCTCAACAAAGTGTTGCTGTAGCTCCAACACCTAGGGCTTTAAGT
GGGACAGCTAGTCTGAACATGGCTGAAGCATTGTCGCAAGCACCGCCGCGCGCTCGTTCC
ACCATGCAGATCCCTGATAAGACACAGAGGCTTGAGGAATTAGCTATAAAGCAATCCAGA
CAGTTGATACCTGTGATACCTTCAATGCCTAAAGTTTCGGTATCCAGTTCTGCTGATAAA
TCAAAGCAACCAAAATCCATAGCTAGGACAAATGAGATGGTTGGAATAACTAAGAGTATG
CAACAACCTTTTTCCTCTCAACTTGCTAATCAGGCTCGTAGTGGACAAGTCAGAGCGGAA
GCTCCAGCTACCTCTCATGGCAAAACTCTTCTGGTTTTGAAGTCAGGACGGGAAAATGGT
GTCACCTCTTTGTCAAAAGAAGCATCAACTCCAGCTAACAACACTGGCAATAGACTAGCT
AATTGCCCTCCTGCAGTGGCTCCTTCAGCTCCTGCTGTGACCAGTCCAACTTCAAGGGTA
ACTTCCCTTGAAACCAAGGCTGCTGCATTGTCACTGAAGCCACGGTCTACTGCAGAGAAG
AGATCTTCTCTGTCTCAAGCCCAAAGCAGGAGTGATTTTTTCAATCTAATGAGGAAGAAG
ACTTCAAATTCTTCTACTGCCCTTCCAGACTCTGGTATGGCTTCATCTAACAGTAGGGAG
CAGTCTTGTCTCAAAACTAAAGATGAGGATAGTGCCTCTTTGAGTCCTTGTGTTTCTGAA
AATGGAAGTGAGAGAACCAGCAATGGAGACCCTCATGAAGCTCAAAACCATGTTCAAAGA
CATAATGATGTTGAGGAGAACAACTCGCCCATAAATGGATCGGTATATCCAGATGAAAAA
GAGGCTGCTTTCCTACGTTCTCTTGGTTGGGATGAAAATGCCGTGGAAGAGGAAGGCCTG
ACAGAGGAAGAGATTAATGCTTTTTATCAGGAGTACATGAAACTGAAGCCATCCTTGAAG
GTTTACAAAGGTGCCCAGCCAAAGTGTTTGATGCTGCCTGAGTTGCACTTGGCTACTAAT
CCTGGAACTGCCTCTTCCAATTCGACTTCATCTGAATCTGATGCTTGA