Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077598
CDS Infomation

pacid=37476004 polypeptide=PGSC0003DMP400052557 locus=PGSC0003DMG400030181 ID=PGSC0003DMT400077598.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGAATATGAAACTGTTAGATATGAAGAGGAATTTATATTGAATTCAAGAGGA
ATGAAATTGTTTACATGTAATTGGGTCCCAAAAGATTGTGAACCAAAAGCTTTGATTTTC
CTCTGTCATGGATATGCCATGGAGTGTAGTATATCAATGAAAGATGCTGGAATGCGATTG
GCGAAATCAGGATTTGGAGTTTATGGAATTGATTATGAAGGACATGGAAAATCAGAAGGA
CTTCAAGGATATGTTAATAGCTTTGATGCTCTTGTTGATGATTGTTTTGATCATTATTCC
AAAATTTCTGAAAGGAAGGAAAATAAAAAAAAGATGAGAATATTGATGGGAGAATCGATG
GGAGGAGCTGTGGTTCTACTTTTACACAGAAAAAAACCTGAATTTTGGGATGGTGCTGTT
TTAATTGCTCCAATGTGTAAGATTGCAGATGATATGAGGCCACCTCCAATGGTGATAAGT
GTTTTGACCAAACTTTGTTACTTTATCCCAACTTGGAAAATAGTTCCAACTCAAGATATT
GTTGATTCAGCATTTAGAGACCCTGAAGTTAGAAAAGAGATTAGAAACAATCCTCATTGC
TACAAGGGAAAGCCCAGGCTACAAACAGCTCACCAACTATTGACAGTCAGCATGGATTTA
GAACAAAGACTTGAAGAAGTCACATTGCCATTTTTCATTGTTCATGGTGAAGATGACACT
GTTACTGATCCATCTGTAAGCAAACTTCTCCACGAAAAGGCATCGAGCATCGACAAGAGC
TTCAAGTTGTACCCCGGGATGTGGCATTCCCTCTCCTACGGTGAATTCCCTGAGAACAGA
GACATTGTGTTCTCGGACATCGTAGTGTGGCTCAAGGAGAAAATAAGCATGGGTAACTCA
AGGCTAGAGAGGCAACAAAAGCAAGCAAATGATCAAATTTTACCAAAGATGAGCAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052557
PEP Infomation

pacid=37476004 transcript=PGSC0003DMT400077598 locus=PGSC0003DMG400030181 ID=PGSC0003DMT400077598.v4.03 annot-version=v4.03
Sequence

MAIEYETVRYEEEFILNSRGMKLFTCNWVPKDCEPKALIFLCHGYAMECSISMKDAGMRL
AKSGFGVYGIDYEGHGKSEGLQGYVNSFDALVDDCFDHYSKISERKENKKKMRILMGESM
GGAVVLLLHRKKPEFWDGAVLIAPMCKIADDMRPPPMVISVLTKLCYFIPTWKIVPTQDI
VDSAFRDPEVRKEIRNNPHCYKGKPRLQTAHQLLTVSMDLEQRLEEVTLPFFIVHGEDDT
VTDPSVSKLLHEKASSIDKSFKLYPGMWHSLSYGEFPENRDIVFSDIVVWLKEKISMGNS
RLERQQKQANDQILPKMSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400077598
Transcript Infomation

pacid=37476004 locus=PGSC0003DMG400030181 ID=PGSC0003DMT400077598.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGAATATGAAACTGTTAGATATGAAGAGGAATTTATATTGAATTCAAGAGGA
ATGAAATTGTTTACATGTAATTGGGTCCCAAAAGATTGTGAACCAAAAGCTTTGATTTTC
CTCTGTCATGGATATGCCATGGAGTGTAGTATATCAATGAAAGATGCTGGAATGCGATTG
GCGAAATCAGGATTTGGAGTTTATGGAATTGATTATGAAGGACATGGAAAATCAGAAGGA
CTTCAAGGATATGTTAATAGCTTTGATGCTCTTGTTGATGATTGTTTTGATCATTATTCC
AAAATTTCTGAAAGGAAGGAAAATAAAAAAAAGATGAGAATATTGATGGGAGAATCGATG
GGAGGAGCTGTGGTTCTACTTTTACACAGAAAAAAACCTGAATTTTGGGATGGTGCTGTT
TTAATTGCTCCAATGTGTAAGATTGCAGATGATATGAGGCCACCTCCAATGGTGATAAGT
GTTTTGACCAAACTTTGTTACTTTATCCCAACTTGGAAAATAGTTCCAACTCAAGATATT
GTTGATTCAGCATTTAGAGACCCTGAAGTTAGAAAAGAGATTAGAAACAATCCTCATTGC
TACAAGGGAAAGCCCAGGCTACAAACAGCTCACCAACTATTGACAGTCAGCATGGATTTA
GAACAAAGACTTGAAGAAGTCACATTGCCATTTTTCATTGTTCATGGTGAAGATGACACT
GTTACTGATCCATCTGTAAGCAAACTTCTCCACGAAAAGGCATCGAGCATCGACAAGAGC
TTCAAGTTGTACCCCGGGATGTGGCATTCCCTCTCCTACGGTGAATTCCCTGAGAACAGA
GACATTGTGTTCTCGGACATCGTAGTGTGGCTCAAGGAGAAAATAAGCATGGGTAACTCA
AGGCTAGAGAGGCAACAAAAGCAAGCAAATGATCAAATTTTACCAAAGATGAGCAGTTAG