Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077580
CDS Infomation

pacid=37455320 polypeptide=PGSC0003DMP400052544 locus=PGSC0003DMG400030172 ID=PGSC0003DMT400077580.v4.03 annot-version=v4.03
Sequence

ATGGGGATCAAAGTTCTTCTTGCAGCTATTCTGATATGGGAAATAACCCGCGGTTTAGGC
CTCAACGTATACGCTGATAATATGGTTAGGATTGAGCTAAAAAGGCAATCTATGGACCTT
AATAACATAAGGGGTGCAAGAATCTATGTTAAAGGTTTGAAGGGTTCCAATAGAAACTCT
GCTTCTTCCGATGAGCAGATAGTTTACATAAAAAATTATCAAGATGTTCAGTACTTTGCG
GAGATTAGTATTGGTTCACCGCCTCAACACTTCACTGTTGTGTTTGATACTGGAAGTTCC
AATCTTTGGGTTCCATCCTCAAAATGCTTCTTCTCGATTGCATGTTATCTTCGTTCCACA
TACAAATCAAGACTATCAAATACGTATACGAAAAATGGGGATTCTTGCAAAATCCCTTTT
GGCACTGGATCAGTGCATGGATTCTTCAGCCAAGACGATACGAAAATTGGAAATGCTGTC
ATAAAGCAGCAGGTCTTCACTGAGGTAACTAAGGAGGGATATTTCACATTCTTGAGAGCA
CGATTCGATGGAGTACTAGGACTTGGATTCCAGGGCGCGGATTCAAGGAATGTCACACCA
GTATGGAATAACATGGTGCTTCAGAAAATAGTTTCAAAGTCAATTTTCTCATTCTGGCTA
AATCGAGATCCCACGTCTAGGATGGCTGGTGAAATTCTCTTTGGAGGCATGGACTGGACT
CATTTTAGGGGTCTACATACATATGTCCCGGTTTCTAAAAATGGTTATTGGGAGATTGAG
ATAGGGGATCTTTTTATAGGAAACAATTCAACAGGCCTTTGTCAGGATGGCTGTCCAGCT
ATTGTGGATACTGGAACAGCTTTTATTTCTGGTCCAACTACCATTTTAACTCAAATAAAT
CATGCTATTGGAGCTGAAGGAGTTGTTAGTTCGCATTGCAAAACTGTTGTCTCGGATTAT
GGCAAAACGATTTGGGAACGATTGCTTTCAGGGTTACATCCTGATAAAGTTTGTCATGGT
ATCTGTACAAATAATCAGACATTAGGTGTAAGTCAGGAACCTCGAATGGGAATTCGAAGT
TCAAAGTCCCAGAGGCTAGAAAGGGATATTTTATGCAATTTTTGTGAGATGGTAGCATTC
TGGATACAAGTAGAGATTAGAAAAGAGAGATCAAAAGATTTGGCATTTCAATATGCTAAT
CAGCTATGTGAGAAGCTACCAAATCCTGGAGGGAAATCATATATCAATTGTGATGTCTTT
TCCCTGCCACATATAACATTTACCATTGGGAACAAGTCTTTCCCCCTTTCTCCAGATCAG
TATGTTATCAGAGTTGATGATCACCAAGGTGTTCATTGTCTCAGTGGATTTACAGCTTTA
AATGTGCATCCGCAACGTCCCCTCTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052544
PEP Infomation

pacid=37455320 transcript=PGSC0003DMT400077580 locus=PGSC0003DMG400030172 ID=PGSC0003DMT400077580.v4.03 annot-version=v4.03
Sequence

MGIKVLLAAILIWEITRGLGLNVYADNMVRIELKRQSMDLNNIRGARIYVKGLKGSNRNS
ASSDEQIVYIKNYQDVQYFAEISIGSPPQHFTVVFDTGSSNLWVPSSKCFFSIACYLRST
YKSRLSNTYTKNGDSCKIPFGTGSVHGFFSQDDTKIGNAVIKQQVFTEVTKEGYFTFLRA
RFDGVLGLGFQGADSRNVTPVWNNMVLQKIVSKSIFSFWLNRDPTSRMAGEILFGGMDWT
HFRGLHTYVPVSKNGYWEIEIGDLFIGNNSTGLCQDGCPAIVDTGTAFISGPTTILTQIN
HAIGAEGVVSSHCKTVVSDYGKTIWERLLSGLHPDKVCHGICTNNQTLGVSQEPRMGIRS
SKSQRLERDILCNFCEMVAFWIQVEIRKERSKDLAFQYANQLCEKLPNPGGKSYINCDVF
SLPHITFTIGNKSFPLSPDQYVIRVDDHQGVHCLSGFTALNVHPQRPLW*

Transcript Sequence

Transcript ID

PGSC0003DMT400077580
Transcript Infomation

pacid=37455320 locus=PGSC0003DMG400030172 ID=PGSC0003DMT400077580.v4.03 annot-version=v4.03
Sequence

ATGGGGATCAAAGTTCTTCTTGCAGCTATTCTGATATGGGAAATAACCCGCGGTTTAGGC
CTCAACGTATACGCTGATAATATGGTTAGGATTGAGCTAAAAAGGCAATCTATGGACCTT
AATAACATAAGGGGTGCAAGAATCTATGTTAAAGGTTTGAAGGGTTCCAATAGAAACTCT
GCTTCTTCCGATGAGCAGATAGTTTACATAAAAAATTATCAAGATGTTCAGTACTTTGCG
GAGATTAGTATTGGTTCACCGCCTCAACACTTCACTGTTGTGTTTGATACTGGAAGTTCC
AATCTTTGGGTTCCATCCTCAAAATGCTTCTTCTCGATTGCATGTTATCTTCGTTCCACA
TACAAATCAAGACTATCAAATACGTATACGAAAAATGGGGATTCTTGCAAAATCCCTTTT
GGCACTGGATCAGTGCATGGATTCTTCAGCCAAGACGATACGAAAATTGGAAATGCTGTC
ATAAAGCAGCAGGTCTTCACTGAGGTAACTAAGGAGGGATATTTCACATTCTTGAGAGCA
CGATTCGATGGAGTACTAGGACTTGGATTCCAGGGCGCGGATTCAAGGAATGTCACACCA
GTATGGAATAACATGGTGCTTCAGAAAATAGTTTCAAAGTCAATTTTCTCATTCTGGCTA
AATCGAGATCCCACGTCTAGGATGGCTGGTGAAATTCTCTTTGGAGGCATGGACTGGACT
CATTTTAGGGGTCTACATACATATGTCCCGGTTTCTAAAAATGGTTATTGGGAGATTGAG
ATAGGGGATCTTTTTATAGGAAACAATTCAACAGGCCTTTGTCAGGATGGCTGTCCAGCT
ATTGTGGATACTGGAACAGCTTTTATTTCTGGTCCAACTACCATTTTAACTCAAATAAAT
CATGCTATTGGAGCTGAAGGAGTTGTTAGTTCGCATTGCAAAACTGTTGTCTCGGATTAT
GGCAAAACGATTTGGGAACGATTGCTTTCAGGGTTACATCCTGATAAAGTTTGTCATGGT
ATCTGTACAAATAATCAGACATTAGGTGTAAGTCAGGAACCTCGAATGGGAATTCGAAGT
TCAAAGTCCCAGAGGCTAGAAAGGGATATTTTATGCAATTTTTGTGAGATGGTAGCATTC
TGGATACAAGTAGAGATTAGAAAAGAGAGATCAAAAGATTTGGCATTTCAATATGCTAAT
CAGCTATGTGAGAAGCTACCAAATCCTGGAGGGAAATCATATATCAATTGTGATGTCTTT
TCCCTGCCACATATAACATTTACCATTGGGAACAAGTCTTTCCCCCTTTCTCCAGATCAG
TATGTTATCAGAGTTGATGATCACCAAGGTGTTCATTGTCTCAGTGGATTTACAGCTTTA
AATGTGCATCCGCAACGTCCCCTCTGGTAA