Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077507
CDS Infomation

pacid=37430948 polypeptide=PGSC0003DMP400052502 locus=PGSC0003DMG400030142 ID=PGSC0003DMT400077507.v4.03 annot-version=v4.03
Sequence

ATGAATGTAACATATGAAGCAGATGCTTCTCCAGCAAACGGTGTAATTCAGCTCACCAAA
AACCAGCTTGATAGTGGTGAAAGCTTTAGCGTAGGCCGAGCTACATATTCTAAAGAACTC
TATCTTTTGGACAAGGCCTCTGGGAAAGTCAGAGATTTCTCTACGCACTTCTCCTTTGAG
ATCAATTCACAGGGCAGAAATTATTATGCTGATGGTCTTGCCTTCTTCCTCGCTCCTGCA
GGTTCAGTAATTCCTGAAAAATACTCAGCCGCAGGAGAGGGCCTTGGCCTTGCAATTGAT
AATGGACTAAATACATCGAAAAATCAGCCTTTTGTTGCTGTCGAGTTTGACACCTTTAAG
AACGCTTATGATCCACCGGGTGATCATATAGGCGTTGATATCAACTCCATGGTAACTCTT
GTTAATGTGGCCTGGCTTAGTAGAATTCCCTATGGTACGAAAACTGATGCCTGGATTACT
TATAATTCAACCTCAAGAAATCTTAGTGTTGTCTTCACCGGTTTCAGACAACAAGGGAAT
ACCACAGTCACTGTCCTGCAGAACCTATCTTACAATCTTGATCTGAGGGAATATTTGCCA
GAATGGGTAACTTTGGTTTCTCAGATCCAGATGTACCCCAACCAAGCCCTGTGCCAGAAG
ATACTTCAAGCAAAAGAAGTCAGGACTAGTGATTGGATTGATTTCTGGTGGTTGTGTTTC
GGTAGCAGTATCTGTTTTTATATTGTTTGCATTTTGGAGAAAGAGGAAGCTAGGCTAGTT
GACCATGATAAGGGATCCCAAACAACAGTTTTGGCAGGCACGATGGGTTACATGGCTCCT
GAATGTCTCACCACTGGCAAAGCTAGCAAGGAAACAGACGTCTATAGCTTTGGTGTTGTC
GCGTTAGAAATAGTTTGTGGAAGGAAACCTATTGATCCTAAATCTGAGGAGCATCAAGTA
AATATTATTGAATGGGCTTGGAGACTTTACGGGATGGGAAATCTTAGTGAAGCAGTTGAT
CCTAGACTCTCATCAGAGTTGAGTGAACAGGAGGTGGAGCACTTGCTAATTGTTGGCTTA
TGGTGTGCTCATCCAGATAACAATTGCAGACCTTCTATTAGGCAAGCAATTCAGGTGCTT
AATTTTGAAGCTCCATTGCCCACACTCCCTCCAAACATGCCTGTGCCGATATATTGCAGT
TATGAATCAATTACTTCACTTGCATCACCATACGACTCCAATGGTCCTCAGATTTCTGAA
ATAAACTCTTCAGTGACTAGAGACTGCACTGGTTCTTCAAATAACACAGCAGCATCTTCG
CCTTCGGCATCACTTCTGAACACACGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052502
PEP Infomation

pacid=37430948 transcript=PGSC0003DMT400077507 locus=PGSC0003DMG400030142 ID=PGSC0003DMT400077507.v4.03 annot-version=v4.03
Sequence

MNVTYEADASPANGVIQLTKNQLDSGESFSVGRATYSKELYLLDKASGKVRDFSTHFSFE
INSQGRNYYADGLAFFLAPAGSVIPEKYSAAGEGLGLAIDNGLNTSKNQPFVAVEFDTFK
NAYDPPGDHIGVDINSMVTLVNVAWLSRIPYGTKTDAWITYNSTSRNLSVVFTGFRQQGN
TTVTVLQNLSYNLDLREYLPEWVTLVSQIQMYPNQALCQKILQAKEVRTSDWIDFWWLCF
GSSICFYIVCILEKEEARLVDHDKGSQTTVLAGTMGYMAPECLTTGKASKETDVYSFGVV
ALEIVCGRKPIDPKSEEHQVNIIEWAWRLYGMGNLSEAVDPRLSSELSEQEVEHLLIVGL
WCAHPDNNCRPSIRQAIQVLNFEAPLPTLPPNMPVPIYCSYESITSLASPYDSNGPQISE
INSSVTRDCTGSSNNTAASSPSASLLNTR*

Transcript Sequence

Transcript ID

PGSC0003DMT400077507
Transcript Infomation

pacid=37430948 locus=PGSC0003DMG400030142 ID=PGSC0003DMT400077507.v4.03 annot-version=v4.03
Sequence

ATGAATGTAACATATGAAGCAGATGCTTCTCCAGCAAACGGTGTAATTCAGCTCACCAAA
AACCAGCTTGATAGTGGTGAAAGCTTTAGCGTAGGCCGAGCTACATATTCTAAAGAACTC
TATCTTTTGGACAAGGCCTCTGGGAAAGTCAGAGATTTCTCTACGCACTTCTCCTTTGAG
ATCAATTCACAGGGCAGAAATTATTATGCTGATGGTCTTGCCTTCTTCCTCGCTCCTGCA
GGTTCAGTAATTCCTGAAAAATACTCAGCCGCAGGAGAGGGCCTTGGCCTTGCAATTGAT
AATGGACTAAATACATCGAAAAATCAGCCTTTTGTTGCTGTCGAGTTTGACACCTTTAAG
AACGCTTATGATCCACCGGGTGATCATATAGGCGTTGATATCAACTCCATGGTAACTCTT
GTTAATGTGGCCTGGCTTAGTAGAATTCCCTATGGTACGAAAACTGATGCCTGGATTACT
TATAATTCAACCTCAAGAAATCTTAGTGTTGTCTTCACCGGTTTCAGACAACAAGGGAAT
ACCACAGTCACTGTCCTGCAGAACCTATCTTACAATCTTGATCTGAGGGAATATTTGCCA
GAATGGGTAACTTTGGTTTCTCAGATCCAGATGTACCCCAACCAAGCCCTGTGCCAGAAG
ATACTTCAAGCAAAAGAAGTCAGGACTAGTGATTGGATTGATTTCTGGTGGTTGTGTTTC
GGTAGCAGTATCTGTTTTTATATTGTTTGCATTTTGGAGAAAGAGGAAGCTAGGCTAGTT
GACCATGATAAGGGATCCCAAACAACAGTTTTGGCAGGCACGATGGGTTACATGGCTCCT
GAATGTCTCACCACTGGCAAAGCTAGCAAGGAAACAGACGTCTATAGCTTTGGTGTTGTC
GCGTTAGAAATAGTTTGTGGAAGGAAACCTATTGATCCTAAATCTGAGGAGCATCAAGTA
AATATTATTGAATGGGCTTGGAGACTTTACGGGATGGGAAATCTTAGTGAAGCAGTTGAT
CCTAGACTCTCATCAGAGTTGAGTGAACAGGAGGTGGAGCACTTGCTAATTGTTGGCTTA
TGGTGTGCTCATCCAGATAACAATTGCAGACCTTCTATTAGGCAAGCAATTCAGGTGCTT
AATTTTGAAGCTCCATTGCCCACACTCCCTCCAAACATGCCTGTGCCGATATATTGCAGT
TATGAATCAATTACTTCACTTGCATCACCATACGACTCCAATGGTCCTCAGATTTCTGAA
ATAAACTCTTCAGTGACTAGAGACTGCACTGGTTCTTCAAATAACACAGCAGCATCTTCG
CCTTCGGCATCACTTCTGAACACACGTTGA