Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077488
CDS Infomation

pacid=37449936 polypeptide=PGSC0003DMP400052491 locus=PGSC0003DMG400030134 ID=PGSC0003DMT400077488.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGGTGGTGGTGGAAGATCGTTGGAGCAAACGCCGACGTGGGCGGTTGCCGTT
GTTTGTTTTGTGTTAGTTGCAATATCTATTGTCATTGAACATATTATCCACCTTATTGGA
AAGTGGTTGAAGTCTAAAAATAAAAGTGCCTTGTATGAATCACTTGAAAAGATCAAAGCA
GAGCTTATGCTGCTGGGATTCATATCATTGCTGTTAACAGTAGGACAAAGTCCAATTTCG
AACATATGTGTATCAGAAAAAATAGGAAATTCATGGCATCCATGTAGTAAGGAAGAAGAA
GATAATATAATTTCAGAAGATTCGTCGTCTGAGCAACACCGTCGGAGACTTCTTATGGAG
GCCGCCGGTGGTGGCGTTCGACGAATATTGGCTGGTGGTGGTGGAGATGACAAATGCGCA
GCCAAGGGAAAAGTACCATTTGTGTCTGCTGATGGAATTCATCAATTACACATTTTCATC
TTTGTGCTGGCTGTTTTTCATGTCCTCTATTGTATTACAACTTTGGCTTTGGGAAGAGCT
AAGATGAGAAGTTGGAAGTCATGGGAAAATGAAACCAAAACAGCTGAATACGAATTTTCT
CACGATCCTGAGAGGTTTCGATTTACAAGAGAAACATCATTTGGAAGAAGGCACTTGAGC
TTTTGGACCAAAAATCCTATCCTACTTTGGATTGTTTGTTTCTTTAGGCAATTTGTAAGA
TCTGTCCCAAAAGTTGACTACTTAACACTTAGGCATGGATTTATTACGGCACATTTAGCA
CCTCAGAGCCACCAAAAATTTGATTTCCGGAAGTACATTAAACGGTCACTTGAAGAAGAT
TTTAAAGTGGTCGTAGGAATCAGTCCCCCAATATGGTTCCTCGCCGTGCTCTTCTTACTC
TTCAATACTCATGGCTGGTATTCCTATCTCTGGCTACCATTCATCCCCTTGATTGTGATA
TTGTTAGTAGGGACAAAGCTACAAGTGATAATTACAAAAATGGGTCTAAGGATTCATGAA
AGAGGAGAAGTAGTAAAAGGGGTACCTGTGGTTCAGCCAGGGGATCACCTTTTTTGGTTC
AACCGTCCTCGTCTCATTCTTTATCTCATTAACTTTGTCCTCTTTCAGAATGCTTTTCAG
TTGGCCTTCTTTGCTTGGACTTGGTATGAATTTGGGTTGAAATCTTGTTACCATGACCAT
ACAGAGGATATTGTCATCAGAATAACTATGGGGGTTCTCATTCAGATTCTGTGTAGTTAT
GTCACTCTTCCTCTTTATGCCCTTGTAACACAGATGGGTTCAAACATGAAATCAACCATT
TTCAATGAAAGAGTAGCAACAGCATTGAAGAATTGGCACCACACAGCAAAGAAACATGTA
AAGGATCAAAGCAAGCATTCTAATCCAGTGACACCAATGTCAAGTAGACCAGGGACACCT
TCTCATCATGGCATGTCACCCGTGCATTTATTGCGCGGACACTATAGGAGTGATATGGGC
AGTCTTCAAAACTCACCTCGTAGATCAAACTACGATGTTGATCATTGGGACAACGAGGGC
TCACCTTCACCCTCCCGATTTTACCAGGAGGCTGCTGATGGCTCGTTGCACCAAATTCAA
CTTGGTCAGTTGGACCATGAATCGCAAGAAGTTATCGGGCCTAATTCGTCACAAGTGGCT
CCTCTACCACATGAGGGCCACGACCAACATGAGATCACTATTGCTGGATCAAGAGATTTT
TCCTTTGAGAAAAGAACAACTAGTATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400052491
PEP Infomation

pacid=37449936 transcript=PGSC0003DMT400077488 locus=PGSC0003DMG400030134 ID=PGSC0003DMT400077488.v4.03 annot-version=v4.03
Sequence

MAGGGGGRSLEQTPTWAVAVVCFVLVAISIVIEHIIHLIGKWLKSKNKSALYESLEKIKA
ELMLLGFISLLLTVGQSPISNICVSEKIGNSWHPCSKEEEDNIISEDSSSEQHRRRLLME
AAGGGVRRILAGGGGDDKCAAKGKVPFVSADGIHQLHIFIFVLAVFHVLYCITTLALGRA
KMRSWKSWENETKTAEYEFSHDPERFRFTRETSFGRRHLSFWTKNPILLWIVCFFRQFVR
SVPKVDYLTLRHGFITAHLAPQSHQKFDFRKYIKRSLEEDFKVVVGISPPIWFLAVLFLL
FNTHGWYSYLWLPFIPLIVILLVGTKLQVIITKMGLRIHERGEVVKGVPVVQPGDHLFWF
NRPRLILYLINFVLFQNAFQLAFFAWTWYEFGLKSCYHDHTEDIVIRITMGVLIQILCSY
VTLPLYALVTQMGSNMKSTIFNERVATALKNWHHTAKKHVKDQSKHSNPVTPMSSRPGTP
SHHGMSPVHLLRGHYRSDMGSLQNSPRRSNYDVDHWDNEGSPSPSRFYQEAADGSLHQIQ
LGQLDHESQEVIGPNSSQVAPLPHEGHDQHEITIAGSRDFSFEKRTTSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400077488
Transcript Infomation

pacid=37449936 locus=PGSC0003DMG400030134 ID=PGSC0003DMT400077488.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTGGTGGTGGTGGAAGATCGTTGGAGCAAACGCCGACGTGGGCGGTTGCCGTT
GTTTGTTTTGTGTTAGTTGCAATATCTATTGTCATTGAACATATTATCCACCTTATTGGA
AAGTGGTTGAAGTCTAAAAATAAAAGTGCCTTGTATGAATCACTTGAAAAGATCAAAGCA
GAGCTTATGCTGCTGGGATTCATATCATTGCTGTTAACAGTAGGACAAAGTCCAATTTCG
AACATATGTGTATCAGAAAAAATAGGAAATTCATGGCATCCATGTAGTAAGGAAGAAGAA
GATAATATAATTTCAGAAGATTCGTCGTCTGAGCAACACCGTCGGAGACTTCTTATGGAG
GCCGCCGGTGGTGGCGTTCGACGAATATTGGCTGGTGGTGGTGGAGATGACAAATGCGCA
GCCAAGGGAAAAGTACCATTTGTGTCTGCTGATGGAATTCATCAATTACACATTTTCATC
TTTGTGCTGGCTGTTTTTCATGTCCTCTATTGTATTACAACTTTGGCTTTGGGAAGAGCT
AAGATGAGAAGTTGGAAGTCATGGGAAAATGAAACCAAAACAGCTGAATACGAATTTTCT
CACGATCCTGAGAGGTTTCGATTTACAAGAGAAACATCATTTGGAAGAAGGCACTTGAGC
TTTTGGACCAAAAATCCTATCCTACTTTGGATTGTTTGTTTCTTTAGGCAATTTGTAAGA
TCTGTCCCAAAAGTTGACTACTTAACACTTAGGCATGGATTTATTACGGCACATTTAGCA
CCTCAGAGCCACCAAAAATTTGATTTCCGGAAGTACATTAAACGGTCACTTGAAGAAGAT
TTTAAAGTGGTCGTAGGAATCAGTCCCCCAATATGGTTCCTCGCCGTGCTCTTCTTACTC
TTCAATACTCATGGCTGGTATTCCTATCTCTGGCTACCATTCATCCCCTTGATTGTGATA
TTGTTAGTAGGGACAAAGCTACAAGTGATAATTACAAAAATGGGTCTAAGGATTCATGAA
AGAGGAGAAGTAGTAAAAGGGGTACCTGTGGTTCAGCCAGGGGATCACCTTTTTTGGTTC
AACCGTCCTCGTCTCATTCTTTATCTCATTAACTTTGTCCTCTTTCAGAATGCTTTTCAG
TTGGCCTTCTTTGCTTGGACTTGGTATGAATTTGGGTTGAAATCTTGTTACCATGACCAT
ACAGAGGATATTGTCATCAGAATAACTATGGGGGTTCTCATTCAGATTCTGTGTAGTTAT
GTCACTCTTCCTCTTTATGCCCTTGTAACACAGATGGGTTCAAACATGAAATCAACCATT
TTCAATGAAAGAGTAGCAACAGCATTGAAGAATTGGCACCACACAGCAAAGAAACATGTA
AAGGATCAAAGCAAGCATTCTAATCCAGTGACACCAATGTCAAGTAGACCAGGGACACCT
TCTCATCATGGCATGTCACCCGTGCATTTATTGCGCGGACACTATAGGAGTGATATGGGC
AGTCTTCAAAACTCACCTCGTAGATCAAACTACGATGTTGATCATTGGGACAACGAGGGC
TCACCTTCACCCTCCCGATTTTACCAGGAGGCTGCTGATGGCTCGTTGCACCAAATTCAA
CTTGGTCAGTTGGACCATGAATCGCAAGAAGTTATCGGGCCTAATTCGTCACAAGTGGCT
CCTCTACCACATGAGGGCCACGACCAACATGAGATCACTATTGCTGGATCAAGAGATTTT
TCCTTTGAGAAAAGAACAACTAGTATATAG