Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077411
CDS Infomation

pacid=37443792 polypeptide=PGSC0003DMP400052444 locus=PGSC0003DMG404030108 ID=PGSC0003DMT400077411.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTTCTTCCGACGACAACAAGAACAATAACAACAATGATGTTGTCACCGATTTC
TTCCCATTCTATCGACTCTATAAAGACGGTCGAGTAGAACGTTTCTACGAACTTGTTGGC
GTACACGAAGTTCCACCATCGCTGGAAGATCCAGCGACTGGTGTATCATCAAAAGACGTG
AGCATCTCTGCTAACGTCTCCGCTAGACTCTACCTTCCAAAAAACACTGCACCCAATCAA
AAACTCCCTGTCCTAGTGTATTACCACGGAGGTGGACTTGTAATAGGATCTGCATTTTTC
AAAACAGAGCATTGTTACCTCAACCATCTGGTTTCCGAATCAAATTGCATAGCGATTTCT
GTAGATTACCGTCTTGCCCCTGAGCATGACATCCCGACAATCTACCAGGATTGTTGGGAT
GCTCTTCAATGGGTCGCATCACACTCTGTTTTCGATACAATTAACAAAGACCCATGGATT
GAAAATCACGGTGATTTCAACCGTGTGTTTGTAGGGGGTGATAGTGCTGGAGGCAATATA
GTTTATAATATGATCATGAGATTGGGCAGGGAAAAATTGATCGGAGATGTGAAACTTTTG
GGTGCAATACTTGCATTTCCTTATTTGATAATACCTTCGATTGAAAACTTCGATAAAGGT
TTGGCTTACAAGCTTTGGAATTACATTTGCCCGCTCTCTGAAGGGGGAAATGATAATCCA
ATGGTTAATCCAGTCTCGACAAAGAGTCCTGGCTTATCAATGCTAGGGTGCTCGAGACTT
TTTGTGTGTACGGGAGAGAAAGACGAACTTGTCCCAGCAGAAGTTGGGACAAAATTCGTC
AAAGTTGTGAAGAAAAGCGGATGGAAAGGGGAAATTGAGTTAATTGAAGTTGAAGGTGAA
GGTCATGTCTTTCAGTGTGAGAATCCTCAAGCTGAGAAATCTAAAGATTTGATCAAACGT
ATGGCTTCTTTTATCCAACGCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052444
PEP Infomation

pacid=37443792 transcript=PGSC0003DMT400077411 locus=PGSC0003DMG404030108 ID=PGSC0003DMT400077411.v4.03 annot-version=v4.03
Sequence

MASSSDDNKNNNNNDVVTDFFPFYRLYKDGRVERFYELVGVHEVPPSLEDPATGVSSKDV
SISANVSARLYLPKNTAPNQKLPVLVYYHGGGLVIGSAFFKTEHCYLNHLVSESNCIAIS
VDYRLAPEHDIPTIYQDCWDALQWVASHSVFDTINKDPWIENHGDFNRVFVGGDSAGGNI
VYNMIMRLGREKLIGDVKLLGAILAFPYLIIPSIENFDKGLAYKLWNYICPLSEGGNDNP
MVNPVSTKSPGLSMLGCSRLFVCTGEKDELVPAEVGTKFVKVVKKSGWKGEIELIEVEGE
GHVFQCENPQAEKSKDLIKRMASFIQRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400077411
Transcript Infomation

pacid=37443792 locus=PGSC0003DMG404030108 ID=PGSC0003DMT400077411.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTTCTTCCGACGACAACAAGAACAATAACAACAATGATGTTGTCACCGATTTC
TTCCCATTCTATCGACTCTATAAAGACGGTCGAGTAGAACGTTTCTACGAACTTGTTGGC
GTACACGAAGTTCCACCATCGCTGGAAGATCCAGCGACTGGTGTATCATCAAAAGACGTG
AGCATCTCTGCTAACGTCTCCGCTAGACTCTACCTTCCAAAAAACACTGCACCCAATCAA
AAACTCCCTGTCCTAGTGTATTACCACGGAGGTGGACTTGTAATAGGATCTGCATTTTTC
AAAACAGAGCATTGTTACCTCAACCATCTGGTTTCCGAATCAAATTGCATAGCGATTTCT
GTAGATTACCGTCTTGCCCCTGAGCATGACATCCCGACAATCTACCAGGATTGTTGGGAT
GCTCTTCAATGGGTCGCATCACACTCTGTTTTCGATACAATTAACAAAGACCCATGGATT
GAAAATCACGGTGATTTCAACCGTGTGTTTGTAGGGGGTGATAGTGCTGGAGGCAATATA
GTTTATAATATGATCATGAGATTGGGCAGGGAAAAATTGATCGGAGATGTGAAACTTTTG
GGTGCAATACTTGCATTTCCTTATTTGATAATACCTTCGATTGAAAACTTCGATAAAGGT
TTGGCTTACAAGCTTTGGAATTACATTTGCCCGCTCTCTGAAGGGGGAAATGATAATCCA
ATGGTTAATCCAGTCTCGACAAAGAGTCCTGGCTTATCAATGCTAGGGTGCTCGAGACTT
TTTGTGTGTACGGGAGAGAAAGACGAACTTGTCCCAGCAGAAGTTGGGACAAAATTCGTC
AAAGTTGTGAAGAAAAGCGGATGGAAAGGGGAAATTGAGTTAATTGAAGTTGAAGGTGAA
GGTCATGTCTTTCAGTGTGAGAATCCTCAAGCTGAGAAATCTAAAGATTTGATCAAACGT
ATGGCTTCTTTTATCCAACGCAAGTGA