Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077391
CDS Infomation

pacid=37442716 polypeptide=PGSC0003DMP400052435 locus=PGSC0003DMG400030103 ID=PGSC0003DMT400077391.v4.03 annot-version=v4.03
Sequence

ATGTCTTATTATGATTCTTCTTCTTCTTCTTTGGTTCCTCCTCTGATTGATAAACCCAGT
AAAGTTGACCTTGAAGCTGGAAACATTGACCAAATTCAGTGTAGAATTTGCCTTGAAAAT
GATGGTGAAGATTTTATTGCCCCTTGTAAATGCAAGGGTTCATCAAAGTATGTTCACCGA
GAATGCCTTGATCAGTGGCGTGCTGTGAAGGAAGGATTTGCATTTTCTCATTGTACGACT
TGCAAGGCTCCATTTTACTTGAGAGTTAACGATCTTCAAAGAAAATGGCGAACCTTAAAA
TTTCGGTTCTTTGTGACCACAGACATCTTGTTCATCTTTCTTGCAGTTCAGCTTGTGTTA
GCTGCACTGGGATATTTAGTATATGTGATTGATACACATCAGAAGTCTTGGCTTCTTCTG
CATTGGGGGTTTGGAAGTGAACTAGGCTTCTATTACATATGCGGAGCACTGTTGTTTTTC
GCTTTGGTGGGCATATCTGGCTGTTTCTTAACTTGCTTTGACGAAAGTGTGCGCGATGAT
TTGAGTCAGCCCTGCCAGAATGCATTGTCTTGTTGCTCTTGCACAAGCTTGTGTGCAGAC
TGTCATACGCGTAGACCTCATACAGGTACAACTTATATTTGCATTGATACTAACCTATGC
TGCGACAATTGTTCAAACTCGACATGTGAGTGTTGCTCCGAGAATCATTCTTGCACGGAC
TGTGAATGTGGGAGTTGCTTAGGAGGCGGTGGTGATCAATCTGGGATACCGGGATTATTA
GTTGTGGCTATAATTGTGATAGGACTATTCGCCCTCCTTGGCATGTTTTACAGTGTTTTG
GTTGCTACAATGGTCGTACAGAGAATTTGGCAGCGACACTACCACATACTCGAGAAAAGA
ATGCTGACAAAGGTAAATCGACATCCTCGTTTCTTCAATTTGATTGCCATTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052435
PEP Infomation

pacid=37442716 transcript=PGSC0003DMT400077391 locus=PGSC0003DMG400030103 ID=PGSC0003DMT400077391.v4.03 annot-version=v4.03
Sequence

MSYYDSSSSSLVPPLIDKPSKVDLEAGNIDQIQCRICLENDGEDFIAPCKCKGSSKYVHR
ECLDQWRAVKEGFAFSHCTTCKAPFYLRVNDLQRKWRTLKFRFFVTTDILFIFLAVQLVL
AALGYLVYVIDTHQKSWLLLHWGFGSELGFYYICGALLFFALVGISGCFLTCFDESVRDD
LSQPCQNALSCCSCTSLCADCHTRRPHTGTTYICIDTNLCCDNCSNSTCECCSENHSCTD
CECGSCLGGGGDQSGIPGLLVVAIIVIGLFALLGMFYSVLVATMVVQRIWQRHYHILEKR
MLTKVNRHPRFFNLIAIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400077391
Transcript Infomation

pacid=37442716 locus=PGSC0003DMG400030103 ID=PGSC0003DMT400077391.v4.03 annot-version=v4.03
Sequence

ATGTCTTATTATGATTCTTCTTCTTCTTCTTTGGTTCCTCCTCTGATTGATAAACCCAGT
AAAGTTGACCTTGAAGCTGGAAACATTGACCAAATTCAGTGTAGAATTTGCCTTGAAAAT
GATGGTGAAGATTTTATTGCCCCTTGTAAATGCAAGGGTTCATCAAAGTATGTTCACCGA
GAATGCCTTGATCAGTGGCGTGCTGTGAAGGAAGGATTTGCATTTTCTCATTGTACGACT
TGCAAGGCTCCATTTTACTTGAGAGTTAACGATCTTCAAAGAAAATGGCGAACCTTAAAA
TTTCGGTTCTTTGTGACCACAGACATCTTGTTCATCTTTCTTGCAGTTCAGCTTGTGTTA
GCTGCACTGGGATATTTAGTATATGTGATTGATACACATCAGAAGTCTTGGCTTCTTCTG
CATTGGGGGTTTGGAAGTGAACTAGGCTTCTATTACATATGCGGAGCACTGTTGTTTTTC
GCTTTGGTGGGCATATCTGGCTGTTTCTTAACTTGCTTTGACGAAAGTGTGCGCGATGAT
TTGAGTCAGCCCTGCCAGAATGCATTGTCTTGTTGCTCTTGCACAAGCTTGTGTGCAGAC
TGTCATACGCGTAGACCTCATACAGGTACAACTTATATTTGCATTGATACTAACCTATGC
TGCGACAATTGTTCAAACTCGACATGTGAGTGTTGCTCCGAGAATCATTCTTGCACGGAC
TGTGAATGTGGGAGTTGCTTAGGAGGCGGTGGTGATCAATCTGGGATACCGGGATTATTA
GTTGTGGCTATAATTGTGATAGGACTATTCGCCCTCCTTGGCATGTTTTACAGTGTTTTG
GTTGCTACAATGGTCGTACAGAGAATTTGGCAGCGACACTACCACATACTCGAGAAAAGA
ATGCTGACAAAGGTAAATCGACATCCTCGTTTCTTCAATTTGATTGCCATTGTCTAG