Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077373
CDS Infomation

pacid=37444443 polypeptide=PGSC0003DMP400052418 locus=PGSC0003DMG400030097 ID=PGSC0003DMT400077373.v4.03 annot-version=v4.03
Sequence

ATGAACATCACTTCTCTGTTGATGTCAAAGTGGCCTTGCTTTAGATTTCTGCTTCTGTTG
GCATTGTTGTTGGCGATATCTGGAACAAGTACAAGTTTAGCCTATGATAGACGCGAGGTG
ATAAAGGCAAATCGTGGTGTCGTTGCCACTGATGATGGACGATGCTCGAGGATTGGAAGA
GATGTTCTGAGAGAAGGAGGCCACGCTGTGGATGCAGCGGTTGCTGCAGCATTTTGCTTG
GGAGTTGTTAGTCCGGCGTCTAGTGGCATTGGTGGAGGTGCATTCATGCTAATAAGATCA
GCAGATGGAAAAGCACAAGCCTTTGATATGAGAGAAAATGCTCCCAAGAAAGCCTATAAG
AATATGTATGCACAAAATGGTGCTCTAAAATCTAGCGGAGTTCTTTCAATAGCAGTTCCA
GGAGAAATTGCTGGCCTTTACAACGCGTGGAAACAATATGGAAAGCTTCCATGGAGAAGG
CTTGTGAGGCCAGCTGCACATTTAGCTCATAGCGGGTTCAAGATTTCTCCGTATCTTCAC
ATGCAAATGCTCAGAAGTGAATCAGATATAATGGCTGATAAGGGACTTCATGACTTGTTC
ACTTCAAATGGCAGCCTTTTGCGGATAGGAGATATATGTTATAACAAACAGCTAGGGAAA
ACACTAAGAGCACTTTCCGCGTTTGGAATTAGACCATTTTACAATGGATCGATTGGGGTC
AAATTGATCAAGGATATAAGAAAATCCGGAGGCATATTAACAATGGAAGACTTGCAGCAG
TATCAAGTTCGTATAAGAGAACCTATCGTTGCAGACGTGATGGGATTTCAGATAATTGGT
ATGCCACCTCCTTCATCAGGAGGCGCTGCAATGGTGCTAGTACTGAACATTCTTGCACAA
TATGGATTTCCAATGGAAGGTTCGAGCTCCCTTTTGATTCATCGACAAATTGAAGCCTTG
AAACATGCATTTGCAGTGAGGATGAACCTCGGTGATCCAGATTTTGTTAACGTTAAAAAT
GTCGTAAATGATATGCTGTCAACAGAATTTGCAAAACAGTTGAAGAAGACCATATATGAC
AACATGACTTTCAGTCCCAATCACTATGGTGGCAAGTGGAATCAGATTAATGATCATGGT
ACCAGCCACATGTCCATTGTGGACAGTGAACGAAATGCTGTATCGATGACTAGCACTGTA
AATTCTTACTTCGGTGCTAAGTATCTCTCACCGAGTACTGGGATAGTTCTTAACAATGAA
ATGGATGACTTCTCCATTCCTGCAAAACATTCCGAGAATGTTCCACCACCAGCACCTGCA
AATTTTATCCATCCAGGCAAAAGGCCATTGTCATCAATGACACCTACTATTGTTCTCAAG
GGCGGACAACTGAGAGCTGTTGTTGGTGCAAGTGGAGGAGGAATGATCATTGCTGGTACA
ACTGAGGTTTTTCTGAATCACTTTGCAAGGGGAATGGATCCCTTCTCTTCTGTAATGGCT
CCAAGATATTACCATCAGTTGATTCCGAATGTGTTACAATACGAGAATTGGACAGTCGTG
ACAGGTGATCACGTAGAGGCTCCAGCGAAAATAAGGGCTGCCCTTCAAAAGAAGGGACAT
GTCCTACAAAGTATTGCTGGAGGGACAATCTGCCAGTTTGTTGTTCAAGAATTCAAGTCA
TCCAAGTTAGGGGAGCTTGTAGCTGTAAGTGATCCGAGGAAGGGCGGATTTCCTGCTGGA
TTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052418
PEP Infomation

pacid=37444443 transcript=PGSC0003DMT400077373 locus=PGSC0003DMG400030097 ID=PGSC0003DMT400077373.v4.03 annot-version=v4.03
Sequence

MNITSLLMSKWPCFRFLLLLALLLAISGTSTSLAYDRREVIKANRGVVATDDGRCSRIGR
DVLREGGHAVDAAVAAAFCLGVVSPASSGIGGGAFMLIRSADGKAQAFDMRENAPKKAYK
NMYAQNGALKSSGVLSIAVPGEIAGLYNAWKQYGKLPWRRLVRPAAHLAHSGFKISPYLH
MQMLRSESDIMADKGLHDLFTSNGSLLRIGDICYNKQLGKTLRALSAFGIRPFYNGSIGV
KLIKDIRKSGGILTMEDLQQYQVRIREPIVADVMGFQIIGMPPPSSGGAAMVLVLNILAQ
YGFPMEGSSSLLIHRQIEALKHAFAVRMNLGDPDFVNVKNVVNDMLSTEFAKQLKKTIYD
NMTFSPNHYGGKWNQINDHGTSHMSIVDSERNAVSMTSTVNSYFGAKYLSPSTGIVLNNE
MDDFSIPAKHSENVPPPAPANFIHPGKRPLSSMTPTIVLKGGQLRAVVGASGGGMIIAGT
TEVFLNHFARGMDPFSSVMAPRYYHQLIPNVLQYENWTVVTGDHVEAPAKIRAALQKKGH
VLQSIAGGTICQFVVQEFKSSKLGELVAVSDPRKGGFPAGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400077373
Transcript Infomation

pacid=37444443 locus=PGSC0003DMG400030097 ID=PGSC0003DMT400077373.v4.03 annot-version=v4.03
Sequence

ATGAACATCACTTCTCTGTTGATGTCAAAGTGGCCTTGCTTTAGATTTCTGCTTCTGTTG
GCATTGTTGTTGGCGATATCTGGAACAAGTACAAGTTTAGCCTATGATAGACGCGAGGTG
ATAAAGGCAAATCGTGGTGTCGTTGCCACTGATGATGGACGATGCTCGAGGATTGGAAGA
GATGTTCTGAGAGAAGGAGGCCACGCTGTGGATGCAGCGGTTGCTGCAGCATTTTGCTTG
GGAGTTGTTAGTCCGGCGTCTAGTGGCATTGGTGGAGGTGCATTCATGCTAATAAGATCA
GCAGATGGAAAAGCACAAGCCTTTGATATGAGAGAAAATGCTCCCAAGAAAGCCTATAAG
AATATGTATGCACAAAATGGTGCTCTAAAATCTAGCGGAGTTCTTTCAATAGCAGTTCCA
GGAGAAATTGCTGGCCTTTACAACGCGTGGAAACAATATGGAAAGCTTCCATGGAGAAGG
CTTGTGAGGCCAGCTGCACATTTAGCTCATAGCGGGTTCAAGATTTCTCCGTATCTTCAC
ATGCAAATGCTCAGAAGTGAATCAGATATAATGGCTGATAAGGGACTTCATGACTTGTTC
ACTTCAAATGGCAGCCTTTTGCGGATAGGAGATATATGTTATAACAAACAGCTAGGGAAA
ACACTAAGAGCACTTTCCGCGTTTGGAATTAGACCATTTTACAATGGATCGATTGGGGTC
AAATTGATCAAGGATATAAGAAAATCCGGAGGCATATTAACAATGGAAGACTTGCAGCAG
TATCAAGTTCGTATAAGAGAACCTATCGTTGCAGACGTGATGGGATTTCAGATAATTGGT
ATGCCACCTCCTTCATCAGGAGGCGCTGCAATGGTGCTAGTACTGAACATTCTTGCACAA
TATGGATTTCCAATGGAAGGTTCGAGCTCCCTTTTGATTCATCGACAAATTGAAGCCTTG
AAACATGCATTTGCAGTGAGGATGAACCTCGGTGATCCAGATTTTGTTAACGTTAAAAAT
GTCGTAAATGATATGCTGTCAACAGAATTTGCAAAACAGTTGAAGAAGACCATATATGAC
AACATGACTTTCAGTCCCAATCACTATGGTGGCAAGTGGAATCAGATTAATGATCATGGT
ACCAGCCACATGTCCATTGTGGACAGTGAACGAAATGCTGTATCGATGACTAGCACTGTA
AATTCTTACTTCGGTGCTAAGTATCTCTCACCGAGTACTGGGATAGTTCTTAACAATGAA
ATGGATGACTTCTCCATTCCTGCAAAACATTCCGAGAATGTTCCACCACCAGCACCTGCA
AATTTTATCCATCCAGGCAAAAGGCCATTGTCATCAATGACACCTACTATTGTTCTCAAG
GGCGGACAACTGAGAGCTGTTGTTGGTGCAAGTGGAGGAGGAATGATCATTGCTGGTACA
ACTGAGGTTTTTCTGAATCACTTTGCAAGGGGAATGGATCCCTTCTCTTCTGTAATGGCT
CCAAGATATTACCATCAGTTGATTCCGAATGTGTTACAATACGAGAATTGGACAGTCGTG
ACAGGTGATCACGTAGAGGCTCCAGCGAAAATAAGGGCTGCCCTTCAAAAGAAGGGACAT
GTCCTACAAAGTATTGCTGGAGGGACAATCTGCCAGTTTGTTGTTCAAGAATTCAAGTCA
TCCAAGTTAGGGGAGCTTGTAGCTGTAAGTGATCCGAGGAAGGGCGGATTTCCTGCTGGA
TTTTAG