Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077364
CDS Infomation

pacid=37447996 polypeptide=PGSC0003DMP400052411 locus=PGSC0003DMG400030092 ID=PGSC0003DMT400077364.v4.03 annot-version=v4.03
Sequence

ATGTGTTCACTACAACTTCCAAATTGCAGGGTTTTCAACGATGGTAACTTCTCTTCTTCT
TCTTCTTCGGATAAGTTGCAGAAATGTGTGGTTTTCTCGTCATTTTGGGGAGTAGAGTTG
TGCTTCAACGATGGACGGTTTACAGCTAGTTCGGCAGTTAAACGACGACAATATCGGCCG
ATTTCTGTTATGTCTTCATCTTCTGATTCACCTTTCAACATGAATTTGAACGAGTATATG
GTTACACTTGTAAAACCACTGGGTATCCGCTTCGCCCTCTCTGTTGATGGCAAAGTTTTC
GTTCATGCTCTTAAGAAAGGGGGGAATGCTGAGAAATCAAGAATAATAATGGTTGGTGAT
ACATTAAAAAAGGCCAGTGACTCTTCAACTGGGGGGCTTATTGAGATCAATGACTTTGGC
GATACAGAGAAGATGATGAATGAGAACTCAGGGCCTTGTAGCCTGATTCTTGAGAGACCA
TCTTTTCCATTTCCTATCCACCAGCTATATCTTATGGATGATATTGATATTATGTATAAT
AGAGGTCGTGTTCCCGTTGCTACATGGAACAAAAAATTACTTGCCTCCAACTTGCGAACG
TCTTGTGAGGGCAGTGGGAACTCCGGATTTGTAGTATTTTCCCCCAAGTTACTAACATTG
AATGGATGGAATGTTCTGAGTGATGGAGATCAAATCAGGCAACAAGAAAATCTGAACGGT
ACCCCCTGGTTACCATTTAGCCCAATTATCAACATATTTTCTGAGAAAGACACGACAGAT
TCTGAATGGGCGCATGGGAATTTCCCACTGGAAGAATACGTAAAGGCGTTGGATCGTTCA
AAGGGAGAACTGTATTACAATCATGATCTTGGAATGCGCTACAGCAAGATTACTGAGCAA
ATATATGTGGGATCGTGCATACAAAAGGAATCTGATGTGGAAATGCTGTCAGATGTGGGG
ATCACTGCTGTGGTGAATTTTCAGAGTGGGATCGAGGCTGAAAATTGGGGAATTAATGCC
AACATAATCAATGAATCGTGCCAAAGGTTTAATATCCTTATGATCAACTATCCCATAAGG
GAAGGAGATTCATTTGACATGAGAAAGAAACTTCCTTTTTGTGTTGGTCTTCTTCTACGC
TTATTGAAGAAAAACCACAGAGTCTATGTGACTTGTACAACTGGTTTTGATAGATCCCCT
GCTTGTGTAGTAGCTTACCTTCATTGGATGACAGATACTTCCCTTCATGCAGCCTATAAT
TTTGTCACTGGGTTGCATTTATGCAAGCCTGACAGACCAGCCATTGCCTGGGCAACATGG
GATCTCATAGCTATGGTTGAAAATGGTGCACATGATGGGCCTGCAACGCATGCCGTAACA
TTTGTATGGAATGGGCACGAGGGGGAGGATGTCTACCTGGTTGGAGATTTTACAGGTAAC
TGGAAAGAACCAATTCAGGCAGTCCACAAAGGTGGTCCAAGATTTGAGGCTGAAGTTAGA
CTTTCACAGGGAAAGTACCTATATAAGTACATAATTAGTGGAAACTGGAGGCATTCAACC
AATTCACCAACTGAAAGAGATGAAAGGGGAAATCTCAATAATGTAATTGTTGTTGGTGAT
GTTGCCAGTGTCAGGCCTTTCATTCAACAGCAAAAGAAGGACGCAAATATTATGAAGGTG
ATTGAGAGGCCATTGACAGAAAATGAGCGGTTCATGCTGGCAAAAGCTGCTCGATGTGTT
GCGTTCTCAATCTGCCCAATAACGCTAGCACCTAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400052411
PEP Infomation

pacid=37447996 transcript=PGSC0003DMT400077364 locus=PGSC0003DMG400030092 ID=PGSC0003DMT400077364.v4.03 annot-version=v4.03
Sequence

MCSLQLPNCRVFNDGNFSSSSSSDKLQKCVVFSSFWGVELCFNDGRFTASSAVKRRQYRP
ISVMSSSSDSPFNMNLNEYMVTLVKPLGIRFALSVDGKVFVHALKKGGNAEKSRIIMVGD
TLKKASDSSTGGLIEINDFGDTEKMMNENSGPCSLILERPSFPFPIHQLYLMDDIDIMYN
RGRVPVATWNKKLLASNLRTSCEGSGNSGFVVFSPKLLTLNGWNVLSDGDQIRQQENLNG
TPWLPFSPIINIFSEKDTTDSEWAHGNFPLEEYVKALDRSKGELYYNHDLGMRYSKITEQ
IYVGSCIQKESDVEMLSDVGITAVVNFQSGIEAENWGINANIINESCQRFNILMINYPIR
EGDSFDMRKKLPFCVGLLLRLLKKNHRVYVTCTTGFDRSPACVVAYLHWMTDTSLHAAYN
FVTGLHLCKPDRPAIAWATWDLIAMVENGAHDGPATHAVTFVWNGHEGEDVYLVGDFTGN
WKEPIQAVHKGGPRFEAEVRLSQGKYLYKYIISGNWRHSTNSPTERDERGNLNNVIVVGD
VASVRPFIQQQKKDANIMKVIERPLTENERFMLAKAARCVAFSICPITLAPK*

Transcript Sequence

Transcript ID

PGSC0003DMT400077364
Transcript Infomation

pacid=37447996 locus=PGSC0003DMG400030092 ID=PGSC0003DMT400077364.v4.03 annot-version=v4.03
Sequence

ATGTGTTCACTACAACTTCCAAATTGCAGGGTTTTCAACGATGGTAACTTCTCTTCTTCT
TCTTCTTCGGATAAGTTGCAGAAATGTGTGGTTTTCTCGTCATTTTGGGGAGTAGAGTTG
TGCTTCAACGATGGACGGTTTACAGCTAGTTCGGCAGTTAAACGACGACAATATCGGCCG
ATTTCTGTTATGTCTTCATCTTCTGATTCACCTTTCAACATGAATTTGAACGAGTATATG
GTTACACTTGTAAAACCACTGGGTATCCGCTTCGCCCTCTCTGTTGATGGCAAAGTTTTC
GTTCATGCTCTTAAGAAAGGGGGGAATGCTGAGAAATCAAGAATAATAATGGTTGGTGAT
ACATTAAAAAAGGCCAGTGACTCTTCAACTGGGGGGCTTATTGAGATCAATGACTTTGGC
GATACAGAGAAGATGATGAATGAGAACTCAGGGCCTTGTAGCCTGATTCTTGAGAGACCA
TCTTTTCCATTTCCTATCCACCAGCTATATCTTATGGATGATATTGATATTATGTATAAT
AGAGGTCGTGTTCCCGTTGCTACATGGAACAAAAAATTACTTGCCTCCAACTTGCGAACG
TCTTGTGAGGGCAGTGGGAACTCCGGATTTGTAGTATTTTCCCCCAAGTTACTAACATTG
AATGGATGGAATGTTCTGAGTGATGGAGATCAAATCAGGCAACAAGAAAATCTGAACGGT
ACCCCCTGGTTACCATTTAGCCCAATTATCAACATATTTTCTGAGAAAGACACGACAGAT
TCTGAATGGGCGCATGGGAATTTCCCACTGGAAGAATACGTAAAGGCGTTGGATCGTTCA
AAGGGAGAACTGTATTACAATCATGATCTTGGAATGCGCTACAGCAAGATTACTGAGCAA
ATATATGTGGGATCGTGCATACAAAAGGAATCTGATGTGGAAATGCTGTCAGATGTGGGG
ATCACTGCTGTGGTGAATTTTCAGAGTGGGATCGAGGCTGAAAATTGGGGAATTAATGCC
AACATAATCAATGAATCGTGCCAAAGGTTTAATATCCTTATGATCAACTATCCCATAAGG
GAAGGAGATTCATTTGACATGAGAAAGAAACTTCCTTTTTGTGTTGGTCTTCTTCTACGC
TTATTGAAGAAAAACCACAGAGTCTATGTGACTTGTACAACTGGTTTTGATAGATCCCCT
GCTTGTGTAGTAGCTTACCTTCATTGGATGACAGATACTTCCCTTCATGCAGCCTATAAT
TTTGTCACTGGGTTGCATTTATGCAAGCCTGACAGACCAGCCATTGCCTGGGCAACATGG
GATCTCATAGCTATGGTTGAAAATGGTGCACATGATGGGCCTGCAACGCATGCCGTAACA
TTTGTATGGAATGGGCACGAGGGGGAGGATGTCTACCTGGTTGGAGATTTTACAGGTAAC
TGGAAAGAACCAATTCAGGCAGTCCACAAAGGTGGTCCAAGATTTGAGGCTGAAGTTAGA
CTTTCACAGGGAAAGTACCTATATAAGTACATAATTAGTGGAAACTGGAGGCATTCAACC
AATTCACCAACTGAAAGAGATGAAAGGGGAAATCTCAATAATGTAATTGTTGTTGGTGAT
GTTGCCAGTGTCAGGCCTTTCATTCAACAGCAAAAGAAGGACGCAAATATTATGAAGGTG
ATTGAGAGGCCATTGACAGAAAATGAGCGGTTCATGCTGGCAAAAGCTGCTCGATGTGTT
GCGTTCTCAATCTGCCCAATAACGCTAGCACCTAAATAG