Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077358
CDS Infomation

pacid=37457101 polypeptide=PGSC0003DMP400052406 locus=PGSC0003DMG400030089 ID=PGSC0003DMT400077358.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACAAGCATATACTGTGGTATCTGATAGTGAAACAACCGGGGAGGAAAAAACT
TCATCGGCTTTCCCTGAGATAGCAATTGGGATCGACATTGGTACATCGCAATGCAGTGTG
GCAGTTTGGAATGGATCTCAGGTGGAGCTCGTCAGAAACACGAGAAATCGGAAATTGATG
AGATCATATGTCACCTTCAAAGATGAGGTTCCTGCTGGTGGTGTTAGTGATGAACTGGCT
CACGAATATGACATGTTGTCTGGAGCTGCAATCTTCAACATGAAACGTCTGATTGGTAGA
GTCGATACAGATCCGGTGGTTCATGCCAGCAAGAGCCTCCCCTTTTTGGTTGAAACTTTA
AATATCGGTGTCAGGCCATTTATTGCTGCCTTAGTGAACAATATGTGGAGGTCCACTACG
CCTGAAGAAGTTCTTGCCATCTTTCTAGTTGAACTAAGAGCTATGGCTGAAGTTAAACTG
AAACGTCCAGTGAGGAATGTGGTTTTGACAGTTCCGGTATCATTTAGCCGATTCCAGTTG
ACCCGAATCGAACGAGCCTGTGCCATGGCAGGGCTTCATGTTCTAAGATTGATGCCTGAA
CCAACTGCAGTTGCTCTGTTATATGCTCAGCAGCAACAGCAGTCTGGACATGAAAATATG
GGTAGCGGGAGTGAAAAGATAGCTCTTATATTCAATATGGGTGCGGGGTATTGTGACGTA
GCTATAACAGCTACAGCAGGTGGTGTTTCGCAGATCAAGGCCTTGGCTGGCAGCACGGTT
GGAGGTGAGGATCTACTTCAAAATCTGATGCATTACCTCTTACCAAACATGGATGATCTA
TTCTCAAGCCATGGAATTGAAGAAATAAAGAGAATGGGATTGCTTCGAGTTGCCACCCAG
GATGCTATCCACTTACTCTCATTCAATATGAGTGTCCCGATTGATGTCGACTTGGGAAAT
GGAACAAAATTATCTAAGGTTCTCACGAGGGCAGAGTTTGAAGAGGTGAACAAACAAGTC
TTCGAGAAATGTGAAGCTCTGATAAAGCGTTGCTTGCAAGCTGCTAAACTAGAAGCAGAA
GATGTACATGATGTCATAATTGTTGGTGGCTGTTCCTACATTCCAAAGGTTCGGAACATT
GTCATGAGTATATGCAAAAGAGAAGAGCTTTATTCAGGAATGAACCCGCTGGAGGCAGCT
GTACGTGGTGCAGCGCTGGAAGGAGCAGTAGCTTCGGGAATTAGTGATCCATTTGGAAAT
TTGGACCTGTTAACCATCCAAGCAACTCCTTTAAGCATTGGCATTCAAGCTGATGGAAGT
GACTTTGTACCAGTTATTCATCAGAACACCACAACACCAGTAAGGAAAGAACTGATTTTC
ACTACTGTCCATGATAACCAAGCTGAAGCATTGATCCTTGTTTACGAAGGTGACGAGAAA
GCAGCAGAAGACAATCATCTCCTAGGCTATTTTAAGATCAGAGGAATACCTCCAGCACCA
AAAGGTGTTCCAGAGATTAGTGTGTGCATGGACATTGATGCTTCCAATGTCCTGAGAGTC
TTTGCTGGCGTAATGGTGCGCGGGACTCAGCATGCTCCTATGCCTTTCATGGAAGTTAGG
ATGCCTACAGTTGATGATGGACATGGCTGGTCTGCTCAAGCTCTGCATAAAATGTATGGC
TCTACTTTAGATTTGGTAACAGTAAAGAAAATACAGCATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052406
PEP Infomation

pacid=37457101 transcript=PGSC0003DMT400077358 locus=PGSC0003DMG400030089 ID=PGSC0003DMT400077358.v4.03 annot-version=v4.03
Sequence

MAEQAYTVVSDSETTGEEKTSSAFPEIAIGIDIGTSQCSVAVWNGSQVELVRNTRNRKLM
RSYVTFKDEVPAGGVSDELAHEYDMLSGAAIFNMKRLIGRVDTDPVVHASKSLPFLVETL
NIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMAEVKLKRPVRNVVLTVPVSFSRFQL
TRIERACAMAGLHVLRLMPEPTAVALLYAQQQQQSGHENMGSGSEKIALIFNMGAGYCDV
AITATAGGVSQIKALAGSTVGGEDLLQNLMHYLLPNMDDLFSSHGIEEIKRMGLLRVATQ
DAIHLLSFNMSVPIDVDLGNGTKLSKVLTRAEFEEVNKQVFEKCEALIKRCLQAAKLEAE
DVHDVIIVGGCSYIPKVRNIVMSICKREELYSGMNPLEAAVRGAALEGAVASGISDPFGN
LDLLTIQATPLSIGIQADGSDFVPVIHQNTTTPVRKELIFTTVHDNQAEALILVYEGDEK
AAEDNHLLGYFKIRGIPPAPKGVPEISVCMDIDASNVLRVFAGVMVRGTQHAPMPFMEVR
MPTVDDGHGWSAQALHKMYGSTLDLVTVKKIQH*

Transcript Sequence

Transcript ID

PGSC0003DMT400077358
Transcript Infomation

pacid=37457101 locus=PGSC0003DMG400030089 ID=PGSC0003DMT400077358.v4.03 annot-version=v4.03
Sequence

ATGGCTGAACAAGCATATACTGTGGTATCTGATAGTGAAACAACCGGGGAGGAAAAAACT
TCATCGGCTTTCCCTGAGATAGCAATTGGGATCGACATTGGTACATCGCAATGCAGTGTG
GCAGTTTGGAATGGATCTCAGGTGGAGCTCGTCAGAAACACGAGAAATCGGAAATTGATG
AGATCATATGTCACCTTCAAAGATGAGGTTCCTGCTGGTGGTGTTAGTGATGAACTGGCT
CACGAATATGACATGTTGTCTGGAGCTGCAATCTTCAACATGAAACGTCTGATTGGTAGA
GTCGATACAGATCCGGTGGTTCATGCCAGCAAGAGCCTCCCCTTTTTGGTTGAAACTTTA
AATATCGGTGTCAGGCCATTTATTGCTGCCTTAGTGAACAATATGTGGAGGTCCACTACG
CCTGAAGAAGTTCTTGCCATCTTTCTAGTTGAACTAAGAGCTATGGCTGAAGTTAAACTG
AAACGTCCAGTGAGGAATGTGGTTTTGACAGTTCCGGTATCATTTAGCCGATTCCAGTTG
ACCCGAATCGAACGAGCCTGTGCCATGGCAGGGCTTCATGTTCTAAGATTGATGCCTGAA
CCAACTGCAGTTGCTCTGTTATATGCTCAGCAGCAACAGCAGTCTGGACATGAAAATATG
GGTAGCGGGAGTGAAAAGATAGCTCTTATATTCAATATGGGTGCGGGGTATTGTGACGTA
GCTATAACAGCTACAGCAGGTGGTGTTTCGCAGATCAAGGCCTTGGCTGGCAGCACGGTT
GGAGGTGAGGATCTACTTCAAAATCTGATGCATTACCTCTTACCAAACATGGATGATCTA
TTCTCAAGCCATGGAATTGAAGAAATAAAGAGAATGGGATTGCTTCGAGTTGCCACCCAG
GATGCTATCCACTTACTCTCATTCAATATGAGTGTCCCGATTGATGTCGACTTGGGAAAT
GGAACAAAATTATCTAAGGTTCTCACGAGGGCAGAGTTTGAAGAGGTGAACAAACAAGTC
TTCGAGAAATGTGAAGCTCTGATAAAGCGTTGCTTGCAAGCTGCTAAACTAGAAGCAGAA
GATGTACATGATGTCATAATTGTTGGTGGCTGTTCCTACATTCCAAAGGTTCGGAACATT
GTCATGAGTATATGCAAAAGAGAAGAGCTTTATTCAGGAATGAACCCGCTGGAGGCAGCT
GTACGTGGTGCAGCGCTGGAAGGAGCAGTAGCTTCGGGAATTAGTGATCCATTTGGAAAT
TTGGACCTGTTAACCATCCAAGCAACTCCTTTAAGCATTGGCATTCAAGCTGATGGAAGT
GACTTTGTACCAGTTATTCATCAGAACACCACAACACCAGTAAGGAAAGAACTGATTTTC
ACTACTGTCCATGATAACCAAGCTGAAGCATTGATCCTTGTTTACGAAGGTGACGAGAAA
GCAGCAGAAGACAATCATCTCCTAGGCTATTTTAAGATCAGAGGAATACCTCCAGCACCA
AAAGGTGTTCCAGAGATTAGTGTGTGCATGGACATTGATGCTTCCAATGTCCTGAGAGTC
TTTGCTGGCGTAATGGTGCGCGGGACTCAGCATGCTCCTATGCCTTTCATGGAAGTTAGG
ATGCCTACAGTTGATGATGGACATGGCTGGTCTGCTCAAGCTCTGCATAAAATGTATGGC
TCTACTTTAGATTTGGTAACAGTAAAGAAAATACAGCATTGA