Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077355
CDS Infomation

pacid=37455879 polypeptide=PGSC0003DMP400052403 locus=PGSC0003DMG400030087 ID=PGSC0003DMT400077355.v4.03 annot-version=v4.03
Sequence

ATGCAAAGTCCTGAAGATCTTGAGAGGCTGTATTGTGAAATTCATCTGCTTAAGACATTG
AAGCACAAAAACATCATGAAGTTTTATACTTCTTGGGTTGATGTTGCTAATAGGAACATT
AACTTTGTTACAGAGATGTTCACTTCTGGAACTCTTAGACAGTATAGGCTAAAACATAAG
AGGGTTAACATTCGAGCAGTAAAGCGTTGGTGTAGACAGATCCTGAAAGGGCTTCATTAC
CTGCATAGCCATGATCCTCCAGTTATACATAGAGACCTCAAGTGTGATAACATTTTTATC
AACGGGAACCAGGGCGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTATCCTCCGCAAA
TCCCATGCTGCGCGTTGTGTAGGAACGCCAGAGTTCATGGCTCCAGAGGTGTATGCAGAG
GAGTACAATGAATTAGTTGACATTTATTCATTTGGAATGTGTATTTTAGAAATGGTGACC
TTTGAATATCCATACAGTGAGTGTACTCATCCTGCTCAGATCTACAAAAAAGTGACATCT
GGGAAAAAACCAGATTCCCTTTACAAAGTCACAGATCCTGAGGTTCGTCGATTTGTTGAG
AAATGCTTGGCAACAGTATCTCACAGATTATCTGCGAGGGAGCTTCTTGATGACCCTTTT
CTCCAAGTTGATGATTACGTGTCAGACTCAGAGACACCAAATTATTTGCAAGACTCTGAT
GAATTTGACCTTACCTTAGGGCATCGACCCTCGAGCATATGTGATAACAACTCTCTAGTA
AATGGTTGTCTTGGTTATCTTGGATATGAACCAGAGGATGATTTGTACTACCATCAGCTT
GAGTATGAGGCAAATGAAATTGATCTATTCACAGATAACGAAGAGGATGATATGGAAAAT
ACTGATATCAGCATCAAGGGAAGGAGGAGAGAAGACGATGGCATATTTTTACGACTCAGG
ATAGCAGATAAAGAAGGTCGTATCCGAAACATTTATTTTCCTTTTGACATTGAGGATGAC
ACAGCACTAACTGTCGCTACTGAAATGGTGGCCGAGTTGGATATTACAGAACAAGATGTT
ACCAAGATAGCAGACATGATAGATGGTGAGATTGCTTCCTTAGTGCCTGAGTGGAATAAG
GGGTTTGGGATAGAGGAAAGCCCTGACTACATGAACCGTGGCTGCTGTCACAAATGTGCT
TCTAATGGTTCTCTTGTGAACTACCTATCGTCCAATACTCCAGCACCGGCTAGGAACTTG
CAAGTGCTACATTGTACCAAGCATGGATGTGGTGCTATGCATGGCCGTTTTGAGGAGATA
ACATACCATTTTGATGGCTCTGAACAATGTCTCACTGACCGTGCTCCTGACGGCTCATTG
GAATCTGATGGTGTACACTTTACTGATATATGGGCACAAGTTGACAAAACAAAATCACGC
CCACGAGGTTCTGGTGACAATCAATCTGATGGTAAAGACAAAACGGTAGATGAATCCACC
TATGGTGGTGAGGAGGAAGCTACAAGTGTCGACAAGGATGATAAGTCTCATCCAAGACTA
CAAGACTCCCCCTCTTCAAATTCTTCAGGAGCTAGAACCCCAGTAGAAGATCATGAAAAT
GAGATACAGCGAGAGTTGAGGTGGCTTAAGGCCAAGTACCAAATGCAACTAAGGGGGCTT
AAAGATCAGCAATTAGGAGTCGTTCCAAAATATTCGACTCAAAGGTCCAGCAACAAAATC
CCAAGAAATGATAAGGTATCGTCAGATTCAACTCCATCAGTAGAACAGGATCAGCTTCTA
CTACAATCATTTACATCAGGCAAGCACTTTTCCTCAGACTTCCCCATAGAAATTGATAAC
GAAAGTTCTATTTCTAAGGTTAGAAGATATCCACTTGCATATGGTTCTTGCAGCCCAGAG
CACATGGCCACTGCACAGAGTTTCTATACAGGGTCATTGCTTCCCCACTCACTTCACAGG
GCCACTTCTCTTCCTGTTGACGCCATAGATTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052403
PEP Infomation

pacid=37455879 transcript=PGSC0003DMT400077355 locus=PGSC0003DMG400030087 ID=PGSC0003DMT400077355.v4.03 annot-version=v4.03
Sequence

MQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDVANRNINFVTEMFTSGTLRQYRLKHK
RVNIRAVKRWCRQILKGLHYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRK
SHAARCVGTPEFMAPEVYAEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVTS
GKKPDSLYKVTDPEVRRFVEKCLATVSHRLSARELLDDPFLQVDDYVSDSETPNYLQDSD
EFDLTLGHRPSSICDNNSLVNGCLGYLGYEPEDDLYYHQLEYEANEIDLFTDNEEDDMEN
TDISIKGRRREDDGIFLRLRIADKEGRIRNIYFPFDIEDDTALTVATEMVAELDITEQDV
TKIADMIDGEIASLVPEWNKGFGIEESPDYMNRGCCHKCASNGSLVNYLSSNTPAPARNL
QVLHCTKHGCGAMHGRFEEITYHFDGSEQCLTDRAPDGSLESDGVHFTDIWAQVDKTKSR
PRGSGDNQSDGKDKTVDESTYGGEEEATSVDKDDKSHPRLQDSPSSNSSGARTPVEDHEN
EIQRELRWLKAKYQMQLRGLKDQQLGVVPKYSTQRSSNKIPRNDKVSSDSTPSVEQDQLL
LQSFTSGKHFSSDFPIEIDNESSISKVRRYPLAYGSCSPEHMATAQSFYTGSLLPHSLHR
ATSLPVDAIDF*

Transcript Sequence

Transcript ID

PGSC0003DMT400077355
Transcript Infomation

pacid=37455879 locus=PGSC0003DMG400030087 ID=PGSC0003DMT400077355.v4.03 annot-version=v4.03
Sequence

ATGCAAAGTCCTGAAGATCTTGAGAGGCTGTATTGTGAAATTCATCTGCTTAAGACATTG
AAGCACAAAAACATCATGAAGTTTTATACTTCTTGGGTTGATGTTGCTAATAGGAACATT
AACTTTGTTACAGAGATGTTCACTTCTGGAACTCTTAGACAGTATAGGCTAAAACATAAG
AGGGTTAACATTCGAGCAGTAAAGCGTTGGTGTAGACAGATCCTGAAAGGGCTTCATTAC
CTGCATAGCCATGATCCTCCAGTTATACATAGAGACCTCAAGTGTGATAACATTTTTATC
AACGGGAACCAGGGCGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTATCCTCCGCAAA
TCCCATGCTGCGCGTTGTGTAGGAACGCCAGAGTTCATGGCTCCAGAGGTGTATGCAGAG
GAGTACAATGAATTAGTTGACATTTATTCATTTGGAATGTGTATTTTAGAAATGGTGACC
TTTGAATATCCATACAGTGAGTGTACTCATCCTGCTCAGATCTACAAAAAAGTGACATCT
GGGAAAAAACCAGATTCCCTTTACAAAGTCACAGATCCTGAGGTTCGTCGATTTGTTGAG
AAATGCTTGGCAACAGTATCTCACAGATTATCTGCGAGGGAGCTTCTTGATGACCCTTTT
CTCCAAGTTGATGATTACGTGTCAGACTCAGAGACACCAAATTATTTGCAAGACTCTGAT
GAATTTGACCTTACCTTAGGGCATCGACCCTCGAGCATATGTGATAACAACTCTCTAGTA
AATGGTTGTCTTGGTTATCTTGGATATGAACCAGAGGATGATTTGTACTACCATCAGCTT
GAGTATGAGGCAAATGAAATTGATCTATTCACAGATAACGAAGAGGATGATATGGAAAAT
ACTGATATCAGCATCAAGGGAAGGAGGAGAGAAGACGATGGCATATTTTTACGACTCAGG
ATAGCAGATAAAGAAGGTCGTATCCGAAACATTTATTTTCCTTTTGACATTGAGGATGAC
ACAGCACTAACTGTCGCTACTGAAATGGTGGCCGAGTTGGATATTACAGAACAAGATGTT
ACCAAGATAGCAGACATGATAGATGGTGAGATTGCTTCCTTAGTGCCTGAGTGGAATAAG
GGGTTTGGGATAGAGGAAAGCCCTGACTACATGAACCGTGGCTGCTGTCACAAATGTGCT
TCTAATGGTTCTCTTGTGAACTACCTATCGTCCAATACTCCAGCACCGGCTAGGAACTTG
CAAGTGCTACATTGTACCAAGCATGGATGTGGTGCTATGCATGGCCGTTTTGAGGAGATA
ACATACCATTTTGATGGCTCTGAACAATGTCTCACTGACCGTGCTCCTGACGGCTCATTG
GAATCTGATGGTGTACACTTTACTGATATATGGGCACAAGTTGACAAAACAAAATCACGC
CCACGAGGTTCTGGTGACAATCAATCTGATGGTAAAGACAAAACGGTAGATGAATCCACC
TATGGTGGTGAGGAGGAAGCTACAAGTGTCGACAAGGATGATAAGTCTCATCCAAGACTA
CAAGACTCCCCCTCTTCAAATTCTTCAGGAGCTAGAACCCCAGTAGAAGATCATGAAAAT
GAGATACAGCGAGAGTTGAGGTGGCTTAAGGCCAAGTACCAAATGCAACTAAGGGGGCTT
AAAGATCAGCAATTAGGAGTCGTTCCAAAATATTCGACTCAAAGGTCCAGCAACAAAATC
CCAAGAAATGATAAGGTATCGTCAGATTCAACTCCATCAGTAGAACAGGATCAGCTTCTA
CTACAATCATTTACATCAGGCAAGCACTTTTCCTCAGACTTCCCCATAGAAATTGATAAC
GAAAGTTCTATTTCTAAGGTTAGAAGATATCCACTTGCATATGGTTCTTGCAGCCCAGAG
CACATGGCCACTGCACAGAGTTTCTATACAGGGTCATTGCTTCCCCACTCACTTCACAGG
GCCACTTCTCTTCCTGTTGACGCCATAGATTTCTAA