Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077343
CDS Infomation

pacid=37458743 polypeptide=PGSC0003DMP400052391 locus=PGSC0003DMG400030082 ID=PGSC0003DMT400077343.v4.03 annot-version=v4.03
Sequence

ATGACGGAACTGATAAAAGTATTACACATTTTTGTTGCTTTTTTCTTCTTGTTCTTTTCT
ATCAACTCTCAATGTCATCCTTTAGACCCTCTTAATCCTGATGAAATCAATCAAATTAGA
GTCATTATCCAAAAATCCCACCTTTCCAATGTAACATTTCATGATGTAGACCTTGATGAA
CCAGAAAAGAATGATGTCCTTCATTGGCTTTCCTTTCATAAATCAAACAATACCTCTTTT
CCTTATCGTCGAGCCAAGGTAGTAGTTCGCGCTAATGGTGAGTCATATGAACTCACAATA
GACTTGGCTACTAGCTCTATCATATCACAAAAGTTGTACTCAGGTTATGGCTTTCCTTCT
TTTACTCTCAATGAACTTATACAGGCCACCAGCCTGCCATTGAGTAGTCCTGAATTTCAA
GATTCAATGTCACGAAGGGGCTTGAATATATCTGAAGTCAGCTGCATACCATTATCAGTT
GGATGGTTTGGCCAGGCAAAGACTAGAAGAGTTCTTAGTGTTCCATGTTTGTATCGCGGA
GGGACTACCAACTTTTGGGCAAGGCCTATTGAAGGAATAACTATACTAGTAGATCTTGAA
TCAATGAAGATCATTAAGTATTTGGATAGATTCAGGGCCGCATTGCCTGAAGCAAAAGAT
GCTGATTTCAATTCGCCGAGCCAGGGATCATTTACTTGCAATGAAACGGGATCCTCCAGG
ATAAACATCCAATGCCATGAAGTCAGATGGGCTAATTGGAAACTTCATGTTGGATTCAAT
ACTAGAGCAGGGATGATCATATCTACAGCTTCTATATTTGATGCTGTGAGAAATGAATAT
CGACGTGTTCTCTATAGAGGTCATGCCTCTGAGATATTCGTGCCTTACATGGATCCTACG
TTTGAATGGTACTACAGGACATTTCTGGATGTTGGTGAATATGGCTTTGGGAGATCGGCT
AGTACCCTTGTCCAGTCGTTGGACTGTCCAAACAACGCGGTGTATATGGATGGTTACATG
GCTGATTCAGAAGGTCAAGTAGTACAAATCCCTCGAGCTATTTGCATTTTTGAACGATAT
GCTGGCGATGCTGCATGGAGGCATACAGAAAACGGAAACACCAAGGGACAGAAAGAAGTT
AATTTGGTGATCAGAATGGTAACAACAGTTGGAAATTATGACTATATACTTGATTGGGAG
TTCAAACAAAGTGGATCCATTAAAGTTGGAGCAAGTCTAACAGGGATTATGGCGATGAAG
GCTGTGGAATACACGAACAACGATCAAATAAGTCAGGATGTTTACGGTACTCTTGTGGCA
GAAAACATAATTGCAGTGAACCATGATCATTTCCTTACGTACCGCATTGATCTTGATGTG
GATGGTAGTAAGAATTCATTCTTGAAAGCTAAACTGAAAACTACAAGAGTGAAAGACCAA
AATATGTCACCAAGGAAGAGTTATTGGAGTGTTGTTAAAGAAATTGTGAAAACAGAATCT
GAAGGCAGGACACAACTTGGGATTGAAGCAGCTGAATTGTTGTTTGTTAATACTGAAAAA
AAGAGTAAAGTTGGAAATGATGTAGGTTATAAGCTAATTCCTAGTAGACCATCTATGTCT
TTGTTAACAGATGATGATTACCCTCAAATTAGAGCAGCTTATACTAAGTATCAACTGTGG
GTGACTCCTTACAACAAGTCAGAAAGATGGGCTGCTGGATTTTATGCTGATAGAAGTCAT
GGTGATGATGGACTCTCAGTTTGGAGTGGCAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052391
PEP Infomation

pacid=37458743 transcript=PGSC0003DMT400077343 locus=PGSC0003DMG400030082 ID=PGSC0003DMT400077343.v4.03 annot-version=v4.03
Sequence

MTELIKVLHIFVAFFFLFFSINSQCHPLDPLNPDEINQIRVIIQKSHLSNVTFHDVDLDE
PEKNDVLHWLSFHKSNNTSFPYRRAKVVVRANGESYELTIDLATSSIISQKLYSGYGFPS
FTLNELIQATSLPLSSPEFQDSMSRRGLNISEVSCIPLSVGWFGQAKTRRVLSVPCLYRG
GTTNFWARPIEGITILVDLESMKIIKYLDRFRAALPEAKDADFNSPSQGSFTCNETGSSR
INIQCHEVRWANWKLHVGFNTRAGMIISTASIFDAVRNEYRRVLYRGHASEIFVPYMDPT
FEWYYRTFLDVGEYGFGRSASTLVQSLDCPNNAVYMDGYMADSEGQVVQIPRAICIFERY
AGDAAWRHTENGNTKGQKEVNLVIRMVTTVGNYDYILDWEFKQSGSIKVGASLTGIMAMK
AVEYTNNDQISQDVYGTLVAENIIAVNHDHFLTYRIDLDVDGSKNSFLKAKLKTTRVKDQ
NMSPRKSYWSVVKEIVKTESEGRTQLGIEAAELLFVNTEKKSKVGNDVGYKLIPSRPSMS
LLTDDDYPQIRAAYTKYQLWVTPYNKSERWAAGFYADRSHGDDGLSVWSGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400077343
Transcript Infomation

pacid=37458743 locus=PGSC0003DMG400030082 ID=PGSC0003DMT400077343.v4.03 annot-version=v4.03
Sequence

ATGACGGAACTGATAAAAGTATTACACATTTTTGTTGCTTTTTTCTTCTTGTTCTTTTCT
ATCAACTCTCAATGTCATCCTTTAGACCCTCTTAATCCTGATGAAATCAATCAAATTAGA
GTCATTATCCAAAAATCCCACCTTTCCAATGTAACATTTCATGATGTAGACCTTGATGAA
CCAGAAAAGAATGATGTCCTTCATTGGCTTTCCTTTCATAAATCAAACAATACCTCTTTT
CCTTATCGTCGAGCCAAGGTAGTAGTTCGCGCTAATGGTGAGTCATATGAACTCACAATA
GACTTGGCTACTAGCTCTATCATATCACAAAAGTTGTACTCAGGTTATGGCTTTCCTTCT
TTTACTCTCAATGAACTTATACAGGCCACCAGCCTGCCATTGAGTAGTCCTGAATTTCAA
GATTCAATGTCACGAAGGGGCTTGAATATATCTGAAGTCAGCTGCATACCATTATCAGTT
GGATGGTTTGGCCAGGCAAAGACTAGAAGAGTTCTTAGTGTTCCATGTTTGTATCGCGGA
GGGACTACCAACTTTTGGGCAAGGCCTATTGAAGGAATAACTATACTAGTAGATCTTGAA
TCAATGAAGATCATTAAGTATTTGGATAGATTCAGGGCCGCATTGCCTGAAGCAAAAGAT
GCTGATTTCAATTCGCCGAGCCAGGGATCATTTACTTGCAATGAAACGGGATCCTCCAGG
ATAAACATCCAATGCCATGAAGTCAGATGGGCTAATTGGAAACTTCATGTTGGATTCAAT
ACTAGAGCAGGGATGATCATATCTACAGCTTCTATATTTGATGCTGTGAGAAATGAATAT
CGACGTGTTCTCTATAGAGGTCATGCCTCTGAGATATTCGTGCCTTACATGGATCCTACG
TTTGAATGGTACTACAGGACATTTCTGGATGTTGGTGAATATGGCTTTGGGAGATCGGCT
AGTACCCTTGTCCAGTCGTTGGACTGTCCAAACAACGCGGTGTATATGGATGGTTACATG
GCTGATTCAGAAGGTCAAGTAGTACAAATCCCTCGAGCTATTTGCATTTTTGAACGATAT
GCTGGCGATGCTGCATGGAGGCATACAGAAAACGGAAACACCAAGGGACAGAAAGAAGTT
AATTTGGTGATCAGAATGGTAACAACAGTTGGAAATTATGACTATATACTTGATTGGGAG
TTCAAACAAAGTGGATCCATTAAAGTTGGAGCAAGTCTAACAGGGATTATGGCGATGAAG
GCTGTGGAATACACGAACAACGATCAAATAAGTCAGGATGTTTACGGTACTCTTGTGGCA
GAAAACATAATTGCAGTGAACCATGATCATTTCCTTACGTACCGCATTGATCTTGATGTG
GATGGTAGTAAGAATTCATTCTTGAAAGCTAAACTGAAAACTACAAGAGTGAAAGACCAA
AATATGTCACCAAGGAAGAGTTATTGGAGTGTTGTTAAAGAAATTGTGAAAACAGAATCT
GAAGGCAGGACACAACTTGGGATTGAAGCAGCTGAATTGTTGTTTGTTAATACTGAAAAA
AAGAGTAAAGTTGGAAATGATGTAGGTTATAAGCTAATTCCTAGTAGACCATCTATGTCT
TTGTTAACAGATGATGATTACCCTCAAATTAGAGCAGCTTATACTAAGTATCAACTGTGG
GTGACTCCTTACAACAAGTCAGAAAGATGGGCTGCTGGATTTTATGCTGATAGAAGTCAT
GGTGATGATGGACTCTCAGTTTGGAGTGGCAGGTAA