Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077329
CDS Infomation

pacid=37457426 polypeptide=PGSC0003DMP400052380 locus=PGSC0003DMG400030077 ID=PGSC0003DMT400077329.v4.03 annot-version=v4.03
Sequence

ATGGAACAAGGTTTTGGTTCTGATCCAAGTGGGTCTACCATTGATAAAACTAGGGTTTTA
GATGTGAAGCCTTTAAGATGTCTTTCCCCTGTATTTCCATCCGCAAGTGAAATGTCATCT
ATTACAACTCCACAACCCTCACCTTTTGTGTGTATTACTCCCACTGGTCCGTTCCCGGCT
GGGGTTACTCCAATTTTCCCTTTTTTGACTCCGGATGAGTCGGGAAGGATGGGTGAAAGT
AGTCAACAAACTCCAAATCGGATGCCGAATCAGGGGACTTTTGGTTTTGGGCAACCTATA
TCTCCAATTCCTGTTAATTCATTTGGAAATCCAATTACAAATGGAAATAGTGGACATGTT
AATAATGTAGGAGACTCTGGTAGTGGAAAGAAAAAGGGAGGACCGAAAAAGCCTCGAAAA
GTTCCTCCGGAGAATGTTGTGGAAGTGGATGTTGAACCTTTGTTAAATCAATTGCTAATG
TCTTTTAAACTTGTTGAGTTGGATCAGGCTAAGAAAGCGGATGGTGACAAGGAGGTAGTG
AGGAGGATACTACTAGTTTTTGACTTGTTCAGAAGAAGGATGACTCAAATTGACGAACCG
AGGTATGGTGCAGGTTCTGGTAGAAGGCCAGACTTAAAAGCTTCTAAGATGATGATGACA
AAGGGAATGCGTACAAACCAAACAAAGAGGATTGGAAATGTACCTGGGATTGAAGTTGGT
GACATTTTCTTCTTCAGGATGGAATTATGCGTAGTGGGCTTGCATGCACCAACTATGTCT
GGGATTGATTATATGAGTGTCAAACTAACAAAGGATGAAGAACCTCTTGCAGTCAGCATA
GTGTCTTCTGGAGGATATGACGATGATGGAGGTGACGGAGATCTGTTAATTTACACTGGC
CAAGGCGGAGTCCAGAGGAAGGATGGGCAAATGTTTGATCAGAAACTTGAGAAGGGAAAT
CTTGCTTTGGAAAAGAGTGTGCATCGTGCCAATGATGTAAGAGTAATTAGGGGTGTTAAG
GATGTTGCAAATCCAACTGGGAAGATCTATATTTTTGACGGACTTTATAAGATTCAGGGA
TCATGGGAAGAGAAAAACAAGTCGGGCTGCAATGTTTTTAAGTACAAACTTCTGAGAGTA
CCTGGGCAGCCTGAAGCATTTAAAGTATGGAGGTCAATTCAGCAATGGAGGGATGGTGTG
GTGTCACGTGTTGGAGTCATCTTACCAGACCTGACATCTGGTGCTGAGAGTCAGGCAGTT
TGTCTTGTAAATGATGTAGATGATGAGAAAGGACCGGCCTATTTCACATATATTCCTAGT
CTGAAGTACTCAAAACCTTTCTTAACGCCTAGACCCTCTCTGGGTTGTCAGTGCCTCGGT
GGCTGCCAACCAGATGACACCAATTGCCCTTGTATTCAGAGGAATCAAGGCCTTTTGCCT
TATAGTTCACTTGGGGTTCTCATGACTTACAAAAACTTGATACATGAGTGTGGTTCAGCT
TGTTCGTGCCCTCCTAATTGCCGAAATCGCATGTCTCAAGGAGGTCCTAAAGTTCGTATG
GAGGTCTTTAAAACAAAAAATAAAGGTTGGGGACTCAGGTCTTGGGATCCTATACGAGGA
GGCTGTTTTATTTGTGAATATGCTGGAGAGGTCAGTGACCTTGGTTATGACAGGGATGAC
AATTATATTTTTGATGCAACCCGTATATATGAGCCACTAGAAGCCGTGCATGATTATAAT
GATGAATCTCGGAAAGTCCCTTTTCCCCTTGTAATAAGTGCCAAAAATGGTGGAAATATT
GCTCGATTTATGAATCATAGTTGTTCACCTAATGTATACTGGCAGCTTGTTGTTCGAGAA
AGTAACAATGAAGCATATTATCATATTGCTTTTTTTGCCATTAGACATATTCCTCCCCTA
CAAGAGTTGACCTTTGATTATGGTATGGACAAAGCAGATCATAGGAGAAAGAAGTGTTTA
TGTGGCTCATTCAAATGTAGAGGTTACTTTTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052380
PEP Infomation

pacid=37457426 transcript=PGSC0003DMT400077329 locus=PGSC0003DMG400030077 ID=PGSC0003DMT400077329.v4.03 annot-version=v4.03
Sequence

MEQGFGSDPSGSTIDKTRVLDVKPLRCLSPVFPSASEMSSITTPQPSPFVCITPTGPFPA
GVTPIFPFLTPDESGRMGESSQQTPNRMPNQGTFGFGQPISPIPVNSFGNPITNGNSGHV
NNVGDSGSGKKKGGPKKPRKVPPENVVEVDVEPLLNQLLMSFKLVELDQAKKADGDKEVV
RRILLVFDLFRRRMTQIDEPRYGAGSGRRPDLKASKMMMTKGMRTNQTKRIGNVPGIEVG
DIFFFRMELCVVGLHAPTMSGIDYMSVKLTKDEEPLAVSIVSSGGYDDDGGDGDLLIYTG
QGGVQRKDGQMFDQKLEKGNLALEKSVHRANDVRVIRGVKDVANPTGKIYIFDGLYKIQG
SWEEKNKSGCNVFKYKLLRVPGQPEAFKVWRSIQQWRDGVVSRVGVILPDLTSGAESQAV
CLVNDVDDEKGPAYFTYIPSLKYSKPFLTPRPSLGCQCLGGCQPDDTNCPCIQRNQGLLP
YSSLGVLMTYKNLIHECGSACSCPPNCRNRMSQGGPKVRMEVFKTKNKGWGLRSWDPIRG
GCFICEYAGEVSDLGYDRDDNYIFDATRIYEPLEAVHDYNDESRKVPFPLVISAKNGGNI
ARFMNHSCSPNVYWQLVVRESNNEAYYHIAFFAIRHIPPLQELTFDYGMDKADHRRKKCL
CGSFKCRGYFY*

Transcript Sequence

Transcript ID

PGSC0003DMT400077329
Transcript Infomation

pacid=37457426 locus=PGSC0003DMG400030077 ID=PGSC0003DMT400077329.v4.03 annot-version=v4.03
Sequence

ATGGAACAAGGTTTTGGTTCTGATCCAAGTGGGTCTACCATTGATAAAACTAGGGTTTTA
GATGTGAAGCCTTTAAGATGTCTTTCCCCTGTATTTCCATCCGCAAGTGAAATGTCATCT
ATTACAACTCCACAACCCTCACCTTTTGTGTGTATTACTCCCACTGGTCCGTTCCCGGCT
GGGGTTACTCCAATTTTCCCTTTTTTGACTCCGGATGAGTCGGGAAGGATGGGTGAAAGT
AGTCAACAAACTCCAAATCGGATGCCGAATCAGGGGACTTTTGGTTTTGGGCAACCTATA
TCTCCAATTCCTGTTAATTCATTTGGAAATCCAATTACAAATGGAAATAGTGGACATGTT
AATAATGTAGGAGACTCTGGTAGTGGAAAGAAAAAGGGAGGACCGAAAAAGCCTCGAAAA
GTTCCTCCGGAGAATGTTGTGGAAGTGGATGTTGAACCTTTGTTAAATCAATTGCTAATG
TCTTTTAAACTTGTTGAGTTGGATCAGGCTAAGAAAGCGGATGGTGACAAGGAGGTAGTG
AGGAGGATACTACTAGTTTTTGACTTGTTCAGAAGAAGGATGACTCAAATTGACGAACCG
AGGTATGGTGCAGGTTCTGGTAGAAGGCCAGACTTAAAAGCTTCTAAGATGATGATGACA
AAGGGAATGCGTACAAACCAAACAAAGAGGATTGGAAATGTACCTGGGATTGAAGTTGGT
GACATTTTCTTCTTCAGGATGGAATTATGCGTAGTGGGCTTGCATGCACCAACTATGTCT
GGGATTGATTATATGAGTGTCAAACTAACAAAGGATGAAGAACCTCTTGCAGTCAGCATA
GTGTCTTCTGGAGGATATGACGATGATGGAGGTGACGGAGATCTGTTAATTTACACTGGC
CAAGGCGGAGTCCAGAGGAAGGATGGGCAAATGTTTGATCAGAAACTTGAGAAGGGAAAT
CTTGCTTTGGAAAAGAGTGTGCATCGTGCCAATGATGTAAGAGTAATTAGGGGTGTTAAG
GATGTTGCAAATCCAACTGGGAAGATCTATATTTTTGACGGACTTTATAAGATTCAGGGA
TCATGGGAAGAGAAAAACAAGTCGGGCTGCAATGTTTTTAAGTACAAACTTCTGAGAGTA
CCTGGGCAGCCTGAAGCATTTAAAGTATGGAGGTCAATTCAGCAATGGAGGGATGGTGTG
GTGTCACGTGTTGGAGTCATCTTACCAGACCTGACATCTGGTGCTGAGAGTCAGGCAGTT
TGTCTTGTAAATGATGTAGATGATGAGAAAGGACCGGCCTATTTCACATATATTCCTAGT
CTGAAGTACTCAAAACCTTTCTTAACGCCTAGACCCTCTCTGGGTTGTCAGTGCCTCGGT
GGCTGCCAACCAGATGACACCAATTGCCCTTGTATTCAGAGGAATCAAGGCCTTTTGCCT
TATAGTTCACTTGGGGTTCTCATGACTTACAAAAACTTGATACATGAGTGTGGTTCAGCT
TGTTCGTGCCCTCCTAATTGCCGAAATCGCATGTCTCAAGGAGGTCCTAAAGTTCGTATG
GAGGTCTTTAAAACAAAAAATAAAGGTTGGGGACTCAGGTCTTGGGATCCTATACGAGGA
GGCTGTTTTATTTGTGAATATGCTGGAGAGGTCAGTGACCTTGGTTATGACAGGGATGAC
AATTATATTTTTGATGCAACCCGTATATATGAGCCACTAGAAGCCGTGCATGATTATAAT
GATGAATCTCGGAAAGTCCCTTTTCCCCTTGTAATAAGTGCCAAAAATGGTGGAAATATT
GCTCGATTTATGAATCATAGTTGTTCACCTAATGTATACTGGCAGCTTGTTGTTCGAGAA
AGTAACAATGAAGCATATTATCATATTGCTTTTTTTGCCATTAGACATATTCCTCCCCTA
CAAGAGTTGACCTTTGATTATGGTATGGACAAAGCAGATCATAGGAGAAAGAAGTGTTTA
TGTGGCTCATTCAAATGTAGAGGTTACTTTTACTAG