Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077284
CDS Infomation

pacid=37451808 polypeptide=PGSC0003DMP400052354 locus=PGSC0003DMG400030062 ID=PGSC0003DMT400077284.v4.03 annot-version=v4.03
Sequence

ATGTTGCTCCGTTTGATCCGGAGATCTTATGCTGCTGTTCGCCCTCTATCAATTGAAGCT
TCGACAACAGTGAAGTCCACAAGATCAGGAGGTGGAAGTAGCATTACCACTAGTTTAGAA
GGTGGCACTAGTACTGCCACAAGTACTCGTGGCAGAGACACACTAGGGAGGAGGCTTTTG
AGTTTGATCTATGCAAAACGTAGTGCTGTCATTGCTATACGCAAGTGGAAGGAAGAGGGG
CACCCTGTCCGGAAGTATGAGCTCAATCGCATTGTCCGGGAGTTGCGAAGACACAAACGA
TTTAAACATGCCCTTGAGGTTTGTGAATGGATGAGGGTACAAGATGATATCGAACTATTA
TCTGGTGACTATGCAGTTCATTTGGACTTGATTGCAAAAGTTCGTGGTATGAACAGTGCA
GAGAAGTTTTTTGAAGACCTGCCTGATAAACTGAAGGTCCAGACCACCTGTACTGCCCTT
CTCCACACCTATGTCCAGCATAAGGACACTGCTAAAGCTGAGTCTTTGATGGAAAAAATG
TCCGAATGCGGGTTCTTGAAGTACCCTCTTCCTTATAATCATATGCTTACCTTATACATA
TCCCAAGGGCAACTAGAGAAGGTTCCAGGCCTGATTAAGGAATTGAAGAAAAATACCTCT
CCTGATATTGTCACATACAATCTGGAGTTGGCAGTTTTTGCATCACAGAATAATGTTGAA
GCTGCAGAGAAAGCGTTCCTTGAGCTAAAGAAGGCAAAATTGGACCCTGACTGGATAACA
TTTAGCACCTTAACCAACATCTACATTAAAAGCTCACTTCAGGATAAGGCAAAGTCTACT
TTGAGAGAAATGGAGAAAAGGATTTCCAGGAAGGGTCGAACTGCATATGCTTCTCTCATT
AGTTTGCATACAAATCTACAGAGCAAGGATGAAGTTTTCCGAATATGGAAGGAGATGAAG
TCACTCTTCCGTAAAGTGAATGATACAGAATATAGTTGTATTATATCGTCGTTACTGAAG
TTGGATGAATTTGGAGAAGCAATGAATCTGTACACTGAATGGGAAGCTGGTTCTGTGACC
AAGGATACTAGGATTGCAAATTTAATTCTTGCTGCTTACATTAACAGAAGTGAGATGGAA
AATGCTGTCGATTTTCACAACAGAATGGCGGAGAAAGGCATAACTCCTAGCTGCACCACT
TGGAAGCTTCTTACACAGGGTTATTTGAAGCAAAAGGAAATGGATAAAGTTGTCGAATTT
TTCAAAAAAACTGTTACAAGTGTTTCAAAATGGGATCCGGATGCAAAGATGGTTCAAGAG
ATGTTTCATGTAGTTGAAGAGCAGGGCGACATTCAGATGGCAGAACAGTTACTAGTTACC
CTTCGACACGCTAAGTATGTGAATACAGAGATATATAATGCACTTCTCCGAACTTATGTG
AATGCTGGTAAAATGCCAATGATAGTTACAGAGAGGATGAAAAAGGATAACGTCGAGATG
GATGAGGAAACTCGAAAGTTAATTGGAATAACTAGCAAGATGACTGTAACTGAGGTTCCA
AATGGGGTTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052354
PEP Infomation

pacid=37451808 transcript=PGSC0003DMT400077284 locus=PGSC0003DMG400030062 ID=PGSC0003DMT400077284.v4.03 annot-version=v4.03
Sequence

MLLRLIRRSYAAVRPLSIEASTTVKSTRSGGGSSITTSLEGGTSTATSTRGRDTLGRRLL
SLIYAKRSAVIAIRKWKEEGHPVRKYELNRIVRELRRHKRFKHALEVCEWMRVQDDIELL
SGDYAVHLDLIAKVRGMNSAEKFFEDLPDKLKVQTTCTALLHTYVQHKDTAKAESLMEKM
SECGFLKYPLPYNHMLTLYISQGQLEKVPGLIKELKKNTSPDIVTYNLELAVFASQNNVE
AAEKAFLELKKAKLDPDWITFSTLTNIYIKSSLQDKAKSTLREMEKRISRKGRTAYASLI
SLHTNLQSKDEVFRIWKEMKSLFRKVNDTEYSCIISSLLKLDEFGEAMNLYTEWEAGSVT
KDTRIANLILAAYINRSEMENAVDFHNRMAEKGITPSCTTWKLLTQGYLKQKEMDKVVEF
FKKTVTSVSKWDPDAKMVQEMFHVVEEQGDIQMAEQLLVTLRHAKYVNTEIYNALLRTYV
NAGKMPMIVTERMKKDNVEMDEETRKLIGITSKMTVTEVPNGVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400077284
Transcript Infomation

pacid=37451808 locus=PGSC0003DMG400030062 ID=PGSC0003DMT400077284.v4.03 annot-version=v4.03
Sequence

ATGTTGCTCCGTTTGATCCGGAGATCTTATGCTGCTGTTCGCCCTCTATCAATTGAAGCT
TCGACAACAGTGAAGTCCACAAGATCAGGAGGTGGAAGTAGCATTACCACTAGTTTAGAA
GGTGGCACTAGTACTGCCACAAGTACTCGTGGCAGAGACACACTAGGGAGGAGGCTTTTG
AGTTTGATCTATGCAAAACGTAGTGCTGTCATTGCTATACGCAAGTGGAAGGAAGAGGGG
CACCCTGTCCGGAAGTATGAGCTCAATCGCATTGTCCGGGAGTTGCGAAGACACAAACGA
TTTAAACATGCCCTTGAGGTTTGTGAATGGATGAGGGTACAAGATGATATCGAACTATTA
TCTGGTGACTATGCAGTTCATTTGGACTTGATTGCAAAAGTTCGTGGTATGAACAGTGCA
GAGAAGTTTTTTGAAGACCTGCCTGATAAACTGAAGGTCCAGACCACCTGTACTGCCCTT
CTCCACACCTATGTCCAGCATAAGGACACTGCTAAAGCTGAGTCTTTGATGGAAAAAATG
TCCGAATGCGGGTTCTTGAAGTACCCTCTTCCTTATAATCATATGCTTACCTTATACATA
TCCCAAGGGCAACTAGAGAAGGTTCCAGGCCTGATTAAGGAATTGAAGAAAAATACCTCT
CCTGATATTGTCACATACAATCTGGAGTTGGCAGTTTTTGCATCACAGAATAATGTTGAA
GCTGCAGAGAAAGCGTTCCTTGAGCTAAAGAAGGCAAAATTGGACCCTGACTGGATAACA
TTTAGCACCTTAACCAACATCTACATTAAAAGCTCACTTCAGGATAAGGCAAAGTCTACT
TTGAGAGAAATGGAGAAAAGGATTTCCAGGAAGGGTCGAACTGCATATGCTTCTCTCATT
AGTTTGCATACAAATCTACAGAGCAAGGATGAAGTTTTCCGAATATGGAAGGAGATGAAG
TCACTCTTCCGTAAAGTGAATGATACAGAATATAGTTGTATTATATCGTCGTTACTGAAG
TTGGATGAATTTGGAGAAGCAATGAATCTGTACACTGAATGGGAAGCTGGTTCTGTGACC
AAGGATACTAGGATTGCAAATTTAATTCTTGCTGCTTACATTAACAGAAGTGAGATGGAA
AATGCTGTCGATTTTCACAACAGAATGGCGGAGAAAGGCATAACTCCTAGCTGCACCACT
TGGAAGCTTCTTACACAGGGTTATTTGAAGCAAAAGGAAATGGATAAAGTTGTCGAATTT
TTCAAAAAAACTGTTACAAGTGTTTCAAAATGGGATCCGGATGCAAAGATGGTTCAAGAG
ATGTTTCATGTAGTTGAAGAGCAGGGCGACATTCAGATGGCAGAACAGTTACTAGTTACC
CTTCGACACGCTAAGTATGTGAATACAGAGATATATAATGCACTTCTCCGAACTTATGTG
AATGCTGGTAAAATGCCAATGATAGTTACAGAGAGGATGAAAAAGGATAACGTCGAGATG
GATGAGGAAACTCGAAAGTTAATTGGAATAACTAGCAAGATGACTGTAACTGAGGTTCCA
AATGGGGTTGCTTAA