Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077231
CDS Infomation

pacid=37452176 polypeptide=PGSC0003DMP400052323 locus=PGSC0003DMG400030038 ID=PGSC0003DMT400077231.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGGAAGGTATGAATATCATGATCCTGCTACTCGTTTTCTTAGCGATTACGCAA
TTCTCAAACGCTGATGAACCCTTCGACGTTCGGAAACACCTTGCCACTGTAACCAGGTAT
GCTGATTCGAAGGACATATCCGCGAATTCTTTCGTATCTTCTGAAATTCCAGATCAATGT
ACACCAATTCATTTGAATCTAGTGGCAAGACATGGCACTCGTGCACCAACAAAGAAGAAG
ATAAGGGAATTAGACGCCTTGGATGCTCATTTGGAAGTCCTTGTACGTGATGCAAAAGAG
CATAAGCAATCTTTGGAGAAAATTCCCGCTTGGTTAGCGGGATGGAGGTCTCCTTGGAAA
GGAAAAGTTACAGGTGGAGAGTTGATCGCTGAAGGAGAAGATGAATTATATCATCTTGGA
ATTAGAGTCAGAGAAAGATTTCCAGACCTTTTCAATGAAGAATACCACCCAGATGTATAT
TCAATCAAGACTACCCAGGTTCCTCGGGCATCCGCTAGTGCTGTGGCATTTGCGATGGGT
CTATTTAATGAAAGAGGGAAGCTTGGACCAGGAAGGCATCGAGCTTTTGCAGTTACCAGC
GAAAGCCGTGCAAGTGATATAATTTTGAGATTTCATGATTGTTGTCAAAGCTACAAGGCT
TTTAGAAAAAGTCAGGAGCCAAATGTGGACAAGCTCAAAGAACCTCTATTGAATGAAATT
ACTCGTGAATTAGTCAGGCAATATGGGCTTAATTTTACAAATCAAGATGTATCTTCTTTA
TGGTTCCTCTGCAAACAGGAAGCATCCTTGTTGAACATCACCAATCAAGCTTGTAGTCTG
TTCAGTCCATCTGAGGTTTCTTTGTTGGAGTGGGCTGATGATTTGGAGTTGTTCATTCTG
AAAGGCTATGGTGACACACTAAATTATCAAATGGGAGTGCCACTGCTTGAGGATGTTGTT
CAATCAATGGAACAGGCAATTAAGGCTAAAGAAGAAGGATATGCTCCAGGGATCTATGAA
AAAGCAAGAATGCGTTTTGCTCATGCAGAAACTCTCCTTCCCTTTTCATGCCTAATCGGG
CTCTTTCTTGAAGAATCTGAGTTTGAACTGATACAAAGAGAGGAAAGCTTGGAACTCCCT
CCTAAGCCTCCTAAAAATAGAAACTGGCGGGGAAGTATTGTGGCTCCTTTTGCTGGAAAT
AACATGTTAATCCTTTACAGCTGCCAATTGGACAACTCAAGCAAGTACTTTGTGCAAGTG
CTACATAACGAACGTCCCATTGCATTGCCAGGTTGCAATGGTTCGAGTTTTTGCCCGTTC
AAAGTATTCAAGGAAAAAATAGTAGCTCCTCACTTGAAACATGACTACAACATGCTTTGC
GACGTAATAGAACAGAAACAAAAGGATTCTGCTTCGAGTAAGTTATCACAAATACTTACT
TGGTTTTGGTCGCTGAGGAATGCTGGTTCATTGGGCCAGAAAGATGATTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400052323
PEP Infomation

pacid=37452176 transcript=PGSC0003DMT400077231 locus=PGSC0003DMG400030038 ID=PGSC0003DMT400077231.v4.03 annot-version=v4.03
Sequence

MLKEGMNIMILLLVFLAITQFSNADEPFDVRKHLATVTRYADSKDISANSFVSSEIPDQC
TPIHLNLVARHGTRAPTKKKIRELDALDAHLEVLVRDAKEHKQSLEKIPAWLAGWRSPWK
GKVTGGELIAEGEDELYHLGIRVRERFPDLFNEEYHPDVYSIKTTQVPRASASAVAFAMG
LFNERGKLGPGRHRAFAVTSESRASDIILRFHDCCQSYKAFRKSQEPNVDKLKEPLLNEI
TRELVRQYGLNFTNQDVSSLWFLCKQEASLLNITNQACSLFSPSEVSLLEWADDLELFIL
KGYGDTLNYQMGVPLLEDVVQSMEQAIKAKEEGYAPGIYEKARMRFAHAETLLPFSCLIG
LFLEESEFELIQREESLELPPKPPKNRNWRGSIVAPFAGNNMLILYSCQLDNSSKYFVQV
LHNERPIALPGCNGSSFCPFKVFKEKIVAPHLKHDYNMLCDVIEQKQKDSASSKLSQILT
WFWSLRNAGSLGQKDDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400077231
Transcript Infomation

pacid=37452176 locus=PGSC0003DMG400030038 ID=PGSC0003DMT400077231.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGGAAGGTATGAATATCATGATCCTGCTACTCGTTTTCTTAGCGATTACGCAA
TTCTCAAACGCTGATGAACCCTTCGACGTTCGGAAACACCTTGCCACTGTAACCAGGTAT
GCTGATTCGAAGGACATATCCGCGAATTCTTTCGTATCTTCTGAAATTCCAGATCAATGT
ACACCAATTCATTTGAATCTAGTGGCAAGACATGGCACTCGTGCACCAACAAAGAAGAAG
ATAAGGGAATTAGACGCCTTGGATGCTCATTTGGAAGTCCTTGTACGTGATGCAAAAGAG
CATAAGCAATCTTTGGAGAAAATTCCCGCTTGGTTAGCGGGATGGAGGTCTCCTTGGAAA
GGAAAAGTTACAGGTGGAGAGTTGATCGCTGAAGGAGAAGATGAATTATATCATCTTGGA
ATTAGAGTCAGAGAAAGATTTCCAGACCTTTTCAATGAAGAATACCACCCAGATGTATAT
TCAATCAAGACTACCCAGGTTCCTCGGGCATCCGCTAGTGCTGTGGCATTTGCGATGGGT
CTATTTAATGAAAGAGGGAAGCTTGGACCAGGAAGGCATCGAGCTTTTGCAGTTACCAGC
GAAAGCCGTGCAAGTGATATAATTTTGAGATTTCATGATTGTTGTCAAAGCTACAAGGCT
TTTAGAAAAAGTCAGGAGCCAAATGTGGACAAGCTCAAAGAACCTCTATTGAATGAAATT
ACTCGTGAATTAGTCAGGCAATATGGGCTTAATTTTACAAATCAAGATGTATCTTCTTTA
TGGTTCCTCTGCAAACAGGAAGCATCCTTGTTGAACATCACCAATCAAGCTTGTAGTCTG
TTCAGTCCATCTGAGGTTTCTTTGTTGGAGTGGGCTGATGATTTGGAGTTGTTCATTCTG
AAAGGCTATGGTGACACACTAAATTATCAAATGGGAGTGCCACTGCTTGAGGATGTTGTT
CAATCAATGGAACAGGCAATTAAGGCTAAAGAAGAAGGATATGCTCCAGGGATCTATGAA
AAAGCAAGAATGCGTTTTGCTCATGCAGAAACTCTCCTTCCCTTTTCATGCCTAATCGGG
CTCTTTCTTGAAGAATCTGAGTTTGAACTGATACAAAGAGAGGAAAGCTTGGAACTCCCT
CCTAAGCCTCCTAAAAATAGAAACTGGCGGGGAAGTATTGTGGCTCCTTTTGCTGGAAAT
AACATGTTAATCCTTTACAGCTGCCAATTGGACAACTCAAGCAAGTACTTTGTGCAAGTG
CTACATAACGAACGTCCCATTGCATTGCCAGGTTGCAATGGTTCGAGTTTTTGCCCGTTC
AAAGTATTCAAGGAAAAAATAGTAGCTCCTCACTTGAAACATGACTACAACATGCTTTGC
GACGTAATAGAACAGAAACAAAAGGATTCTGCTTCGAGTAAGTTATCACAAATACTTACT
TGGTTTTGGTCGCTGAGGAATGCTGGTTCATTGGGCCAGAAAGATGATTTATAG