Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077225
CDS Infomation

pacid=37454278 polypeptide=PGSC0003DMP400052321 locus=PGSC0003DMG400030037 ID=PGSC0003DMT400077225.v4.03 annot-version=v4.03
Sequence

ATGGCTATATCATCAGCATCATCGTCAATGCAAGATATGTTCAAACAACGCAAGTATCCA
TTCATCTTCTCTTTATTCCTTTTACTAATGTTCGTAACTTTCCTCCTCATTTCTAACTCC
CAGAAATCACCCATTTTCGCTGCCATGGACTTTGCTCAACGCACCGCTCTAATCAAATCA
GTCCCGGAGTTTAATCCTAACAGTAATAGTACTTCAACTTCAACTAATTTACACCAATCT
GATGAAAACAATAATACTAGTATCAATCATGAGTCCCCGTTGAATAATGTCAGGATTGAT
CCTAAGTCGTCTAACATTCCGCTTACAATTAACCCTGAGAAGTCTGATACGATCATCAGC
GATGAGTTGGAAACGTTCTCTTATCATTGGAAGCTATGCCCAGGTCCACTGGCGGTTGAT
TACATACCATGCCTTGATAACTGGAAGGCAATCAAAAAAATAAAATCGAGAAGGCATATG
GAGCATAGGGAAAGGCATTGCCCTGTTCCTAGTCCCAGATGTTTGATTCCATTGCCGAAA
GGTTATAAGTTGCCCCTTCCGTGGCCTAAGAGTAGGGATATGATATGGTATGACAATGTT
CCTCATCCTAAGCTTGTGGAATATAAGAAAGACCAAAATTGGGTGAAAAAGTCTGGTGAT
TATTTTGTTTTCCCTGGTGGTGGAACACAGTTCAGGGACGGAGTGAATCACTACATCGAA
TTCATTGAAGAGACTTTTCCAACAATTCAATGGGGAAAGAGTATAAGGGTCCTTTTAGAT
GTTGGATGTGGTGTTGCTAGCTTTGGTGGTTATTTGCTGGATAAAAATGTCATTACTATG
TCATTTGCTCCAAAGGATGAACATGAGGCTCAGATACAGTTTGCCCTCGAGCGTGGAATC
CCGGCTACTCTCTCAGTCATTGCAACTAAAAAGCTTGCATTTCCAGATAATGTATATGAT
ATGATTCATTGTGCAAGATGCAGGGTTCATTGGCATGCAGATGGAGGAAAACCATTGATG
GAGCTCAACAGGATTCTTAGGCCTGGAGGGTACTTCATATGGTCTGCAACGCCAGTTTAT
AAGAAGGATGAAGGACATAAGAATGTCTGGAAAGTTATGGTTAATCTGACTGAAGCAATG
TGCTGGAAGATGGTGGCAAGGACCTTCTTTAAAAGGGGTAGAGTCGGGTTAGTTATATAT
CAAAAATCAGATTCATCTTCCTGCTATGAGAATCGCAAGGAAAATATTCCCCCTATGTGT
GACCAGAAGAAGAATAGGCTGAATAGTTCATGGTACACACCACTGGACAGCTGCCTTCTA
CCACTAGCCTCGAGTAACTACAAGTGGCCTGCACCCTGGCCTCAGAGGCTCAACACGAAA
CCTCTAAGTCTATCGCTCGAAACAGATGCTGAAGAGACATTCAACGAGGATACAAGACAC
TGGGCATCATTGGTATCAGATGTATACTTAGGAGGCCTTGCTATAAATTGGTCAAGTGTG
AGGAATGTGATGGACATGAATGCAGGCTATGGAGGATTTGCTACAGCACTGATTGATCGA
CCCCTGTGGGTAATGAATGTTGTTCCTATCAGTGGACCGGATACTCTACCTATTATCTTC
GATAGGGGCTTGGTTGGCACGTACCATGACTGGTGCGAGTCCTTCAATACCTATCCTCGG
ACATATGATCTTCTACATTCCAGCTTCCTCTATGGAAATTTAAGTCAAAGATGTGATCTA
GTGGATGTCGCTGTGGAGATGGACAGAATGGTGAGACCAGGTGGATACATTTTAGTTCAA
GACACTATACAGATGATTAAACAACTAGGCTCGATTCTACGTTCACTTCATTGGTCAGTA
ACTCTGCATCAACATCAATTTCTTGTTGGTAAGAAAGACTTTTGGCGCCCCAAAGACGTT
GCAAGGGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400052321
PEP Infomation

pacid=37454278 transcript=PGSC0003DMT400077225 locus=PGSC0003DMG400030037 ID=PGSC0003DMT400077225.v4.03 annot-version=v4.03
Sequence

MAISSASSSMQDMFKQRKYPFIFSLFLLLMFVTFLLISNSQKSPIFAAMDFAQRTALIKS
VPEFNPNSNSTSTSTNLHQSDENNNTSINHESPLNNVRIDPKSSNIPLTINPEKSDTIIS
DELETFSYHWKLCPGPLAVDYIPCLDNWKAIKKIKSRRHMEHRERHCPVPSPRCLIPLPK
GYKLPLPWPKSRDMIWYDNVPHPKLVEYKKDQNWVKKSGDYFVFPGGGTQFRDGVNHYIE
FIEETFPTIQWGKSIRVLLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGI
PATLSVIATKKLAFPDNVYDMIHCARCRVHWHADGGKPLMELNRILRPGGYFIWSATPVY
KKDEGHKNVWKVMVNLTEAMCWKMVARTFFKRGRVGLVIYQKSDSSSCYENRKENIPPMC
DQKKNRLNSSWYTPLDSCLLPLASSNYKWPAPWPQRLNTKPLSLSLETDAEETFNEDTRH
WASLVSDVYLGGLAINWSSVRNVMDMNAGYGGFATALIDRPLWVMNVVPISGPDTLPIIF
DRGLVGTYHDWCESFNTYPRTYDLLHSSFLYGNLSQRCDLVDVAVEMDRMVRPGGYILVQ
DTIQMIKQLGSILRSLHWSVTLHQHQFLVGKKDFWRPKDVARE*

Transcript Sequence

Transcript ID

PGSC0003DMT400077225
Transcript Infomation

pacid=37454278 locus=PGSC0003DMG400030037 ID=PGSC0003DMT400077225.v4.03 annot-version=v4.03
Sequence

ATGGCTATATCATCAGCATCATCGTCAATGCAAGATATGTTCAAACAACGCAAGTATCCA
TTCATCTTCTCTTTATTCCTTTTACTAATGTTCGTAACTTTCCTCCTCATTTCTAACTCC
CAGAAATCACCCATTTTCGCTGCCATGGACTTTGCTCAACGCACCGCTCTAATCAAATCA
GTCCCGGAGTTTAATCCTAACAGTAATAGTACTTCAACTTCAACTAATTTACACCAATCT
GATGAAAACAATAATACTAGTATCAATCATGAGTCCCCGTTGAATAATGTCAGGATTGAT
CCTAAGTCGTCTAACATTCCGCTTACAATTAACCCTGAGAAGTCTGATACGATCATCAGC
GATGAGTTGGAAACGTTCTCTTATCATTGGAAGCTATGCCCAGGTCCACTGGCGGTTGAT
TACATACCATGCCTTGATAACTGGAAGGCAATCAAAAAAATAAAATCGAGAAGGCATATG
GAGCATAGGGAAAGGCATTGCCCTGTTCCTAGTCCCAGATGTTTGATTCCATTGCCGAAA
GGTTATAAGTTGCCCCTTCCGTGGCCTAAGAGTAGGGATATGATATGGTATGACAATGTT
CCTCATCCTAAGCTTGTGGAATATAAGAAAGACCAAAATTGGGTGAAAAAGTCTGGTGAT
TATTTTGTTTTCCCTGGTGGTGGAACACAGTTCAGGGACGGAGTGAATCACTACATCGAA
TTCATTGAAGAGACTTTTCCAACAATTCAATGGGGAAAGAGTATAAGGGTCCTTTTAGAT
GTTGGATGTGGTGTTGCTAGCTTTGGTGGTTATTTGCTGGATAAAAATGTCATTACTATG
TCATTTGCTCCAAAGGATGAACATGAGGCTCAGATACAGTTTGCCCTCGAGCGTGGAATC
CCGGCTACTCTCTCAGTCATTGCAACTAAAAAGCTTGCATTTCCAGATAATGTATATGAT
ATGATTCATTGTGCAAGATGCAGGGTTCATTGGCATGCAGATGGAGGAAAACCATTGATG
GAGCTCAACAGGATTCTTAGGCCTGGAGGGTACTTCATATGGTCTGCAACGCCAGTTTAT
AAGAAGGATGAAGGACATAAGAATGTCTGGAAAGTTATGGTTAATCTGACTGAAGCAATG
TGCTGGAAGATGGTGGCAAGGACCTTCTTTAAAAGGGGTAGAGTCGGGTTAGTTATATAT
CAAAAATCAGATTCATCTTCCTGCTATGAGAATCGCAAGGAAAATATTCCCCCTATGTGT
GACCAGAAGAAGAATAGGCTGAATAGTTCATGGTACACACCACTGGACAGCTGCCTTCTA
CCACTAGCCTCGAGTAACTACAAGTGGCCTGCACCCTGGCCTCAGAGGCTCAACACGAAA
CCTCTAAGTCTATCGCTCGAAACAGATGCTGAAGAGACATTCAACGAGGATACAAGACAC
TGGGCATCATTGGTATCAGATGTATACTTAGGAGGCCTTGCTATAAATTGGTCAAGTGTG
AGGAATGTGATGGACATGAATGCAGGCTATGGAGGATTTGCTACAGCACTGATTGATCGA
CCCCTGTGGGTAATGAATGTTGTTCCTATCAGTGGACCGGATACTCTACCTATTATCTTC
GATAGGGGCTTGGTTGGCACGTACCATGACTGGTGCGAGTCCTTCAATACCTATCCTCGG
ACATATGATCTTCTACATTCCAGCTTCCTCTATGGAAATTTAAGTCAAAGATGTGATCTA
GTGGATGTCGCTGTGGAGATGGACAGAATGGTGAGACCAGGTGGATACATTTTAGTTCAA
GACACTATACAGATGATTAAACAACTAGGCTCGATTCTACGTTCACTTCATTGGTCAGTA
ACTCTGCATCAACATCAATTTCTTGTTGGTAAGAAAGACTTTTGGCGCCCCAAAGACGTT
GCAAGGGAATGA