Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077224
CDS Infomation

pacid=37450786 polypeptide=PGSC0003DMP400052320 locus=PGSC0003DMG400030036 ID=PGSC0003DMT400077224.v4.03 annot-version=v4.03
Sequence

ATGGCAAATCTCATATTCTTCTTCCTCATAATAATACTAATCAGCTTTATTAATGCTCCA
ATTTGTTCTTCCCTTGAAAACCCTTCTCACTTCATCAAACATGGTGTTATTCAACAAAAA
TACTTAGAAATAAGTCGTCCATTGCCCTTCGCTAATCTCACTCCTTCCTGCACTCTTCCC
ATTCTCTCTCATCACTTCGGAGATACTATCGGTCTTCCACCTGTCTCCGTCGCTTACGCG
CCGCCGGACAATTGCTCTTGGAACCATGTAGCTCTTCAATTCAACGCCTCTTCCAATGGA
ATACAGTATGACCGTATCGCCGCCGTTTGGCTTGACGGTGCCGATATCTTCCGTACCAGC
ACCGCGGAGCCTACTGAAAGCGGCGTTTTCTGGACTGTTACTAAGGATGTTACCAGGTAC
TCGTCGCTCCTTGCTAAAGAGGATATTTCTCTTTCTGTTATGCTGGAAAATATGGTCAAC
GATGTTTATACAGGTGTTTATTATGTTAATGTTACTATCTTATACTATTATATTGAGGAA
ATGAATGTTCCGTTATCAACTATTAGTACTAATCGGAAAGTCAGAATGGTAGATGATGTG
TTTGTGGATAATCCTATAAGAGGTTCGTTGGGTTTGAATGAAAAACCAGCAGATTTGATT
ATTCCGATTTCGGGTAATAATGGAGGTGAAGGATTTTGGTTCAGAATTCAAAGCGATTCG
GAATTGAAGGGGAAGAGTGTTATCATACCGAAGAACACCTACAAAGCTGTCATGGAAATT
TGCGTATCATTCCATGGCTTGGATGAGTTTTGGTACTCAAATCCCCCTGATTCTTACATA
AGGGAAAATAGTTTGACTAGCCAGAGAGGCCATGGATCGTACAGGGAAGTTTTGTTGAAT
ATCGACAGGAACTTGGTAGGATCTGTGGTTCCATTTCCTGTAATTTACCCAGGTGGAATT
AATCCCCTTTACTGGGATCCAATTGTTTCAATTGGGGCTTTTGATCATCCTTCTTACGAC
ATCGATATAACTCCATTTTTGGGGGATTTACTTGACGGTAAATCCCATTTTATGGGGTTT
AAGGTGCTGGATAGTCTCCCTTTCTGGCTTGTGGATGCAAATTTGCACATTTGGGTAGAT
AAACAATGCACAAGTGATTGTGAAGTGCAGGGTGAAGTTGTTGACTATGGAACTCCTGAT
TACGAGATGGAGCGGTCTTCAAGCTTTAAGGGTCTGGATGGATCATATGAAGTTGAGTTG
AAGAGGAAGAGCCAGTATCACGGGTGGGTGAATTCATCAGCAGGCAATTTGACAACTACA
GTTTCACGAGAACTCAAGTTCAAGAATGAGATAAAGTTTGATAACAAGGGAACTGAAAAA
AAAGTAGAGCAGAAAGTGGAAGAAGAGATTGAAATAAGTGTAGTCTCTGAAACAGGTATG
AAGATTTCTCATACAACTATGAAGAGGGAATATCCTCTAACTATAACCACTAAGACTTCG
AAGCCATCAAGAGAAGATGGTACAATCATTATGCATTCTGAATTAGAAAATGAATGGAAT
GAGGAGAAGAAGTGGAGTGACAGAGATTCACATTCTTGTTCAAGCAGTTTGAAAAATAGA
CAAAAATGCAAAGGGTGTATGTCTGTTCAAGATCGCATTGTTCTACAAAGTGGAGCAACG
ACTGAACAGAGTTATTCATATAATGGTGAAGCTAGCACCTATTCTCGGGAAATCGCAGCT
GTCAATGGCAAGCTTGTACACGATACTGCAAACTACGTGAAGTCTTCTTCGGTTTCTGCT
ATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052320
PEP Infomation

pacid=37450786 transcript=PGSC0003DMT400077224 locus=PGSC0003DMG400030036 ID=PGSC0003DMT400077224.v4.03 annot-version=v4.03
Sequence

MANLIFFFLIIILISFINAPICSSLENPSHFIKHGVIQQKYLEISRPLPFANLTPSCTLP
ILSHHFGDTIGLPPVSVAYAPPDNCSWNHVALQFNASSNGIQYDRIAAVWLDGADIFRTS
TAEPTESGVFWTVTKDVTRYSSLLAKEDISLSVMLENMVNDVYTGVYYVNVTILYYYIEE
MNVPLSTISTNRKVRMVDDVFVDNPIRGSLGLNEKPADLIIPISGNNGGEGFWFRIQSDS
ELKGKSVIIPKNTYKAVMEICVSFHGLDEFWYSNPPDSYIRENSLTSQRGHGSYREVLLN
IDRNLVGSVVPFPVIYPGGINPLYWDPIVSIGAFDHPSYDIDITPFLGDLLDGKSHFMGF
KVLDSLPFWLVDANLHIWVDKQCTSDCEVQGEVVDYGTPDYEMERSSSFKGLDGSYEVEL
KRKSQYHGWVNSSAGNLTTTVSRELKFKNEIKFDNKGTEKKVEQKVEEEIEISVVSETGM
KISHTTMKREYPLTITTKTSKPSREDGTIIMHSELENEWNEEKKWSDRDSHSCSSSLKNR
QKCKGCMSVQDRIVLQSGATTEQSYSYNGEASTYSREIAAVNGKLVHDTANYVKSSSVSA
M*

Transcript Sequence

Transcript ID

PGSC0003DMT400077224
Transcript Infomation

pacid=37450786 locus=PGSC0003DMG400030036 ID=PGSC0003DMT400077224.v4.03 annot-version=v4.03
Sequence

ATGGCAAATCTCATATTCTTCTTCCTCATAATAATACTAATCAGCTTTATTAATGCTCCA
ATTTGTTCTTCCCTTGAAAACCCTTCTCACTTCATCAAACATGGTGTTATTCAACAAAAA
TACTTAGAAATAAGTCGTCCATTGCCCTTCGCTAATCTCACTCCTTCCTGCACTCTTCCC
ATTCTCTCTCATCACTTCGGAGATACTATCGGTCTTCCACCTGTCTCCGTCGCTTACGCG
CCGCCGGACAATTGCTCTTGGAACCATGTAGCTCTTCAATTCAACGCCTCTTCCAATGGA
ATACAGTATGACCGTATCGCCGCCGTTTGGCTTGACGGTGCCGATATCTTCCGTACCAGC
ACCGCGGAGCCTACTGAAAGCGGCGTTTTCTGGACTGTTACTAAGGATGTTACCAGGTAC
TCGTCGCTCCTTGCTAAAGAGGATATTTCTCTTTCTGTTATGCTGGAAAATATGGTCAAC
GATGTTTATACAGGTGTTTATTATGTTAATGTTACTATCTTATACTATTATATTGAGGAA
ATGAATGTTCCGTTATCAACTATTAGTACTAATCGGAAAGTCAGAATGGTAGATGATGTG
TTTGTGGATAATCCTATAAGAGGTTCGTTGGGTTTGAATGAAAAACCAGCAGATTTGATT
ATTCCGATTTCGGGTAATAATGGAGGTGAAGGATTTTGGTTCAGAATTCAAAGCGATTCG
GAATTGAAGGGGAAGAGTGTTATCATACCGAAGAACACCTACAAAGCTGTCATGGAAATT
TGCGTATCATTCCATGGCTTGGATGAGTTTTGGTACTCAAATCCCCCTGATTCTTACATA
AGGGAAAATAGTTTGACTAGCCAGAGAGGCCATGGATCGTACAGGGAAGTTTTGTTGAAT
ATCGACAGGAACTTGGTAGGATCTGTGGTTCCATTTCCTGTAATTTACCCAGGTGGAATT
AATCCCCTTTACTGGGATCCAATTGTTTCAATTGGGGCTTTTGATCATCCTTCTTACGAC
ATCGATATAACTCCATTTTTGGGGGATTTACTTGACGGTAAATCCCATTTTATGGGGTTT
AAGGTGCTGGATAGTCTCCCTTTCTGGCTTGTGGATGCAAATTTGCACATTTGGGTAGAT
AAACAATGCACAAGTGATTGTGAAGTGCAGGGTGAAGTTGTTGACTATGGAACTCCTGAT
TACGAGATGGAGCGGTCTTCAAGCTTTAAGGGTCTGGATGGATCATATGAAGTTGAGTTG
AAGAGGAAGAGCCAGTATCACGGGTGGGTGAATTCATCAGCAGGCAATTTGACAACTACA
GTTTCACGAGAACTCAAGTTCAAGAATGAGATAAAGTTTGATAACAAGGGAACTGAAAAA
AAAGTAGAGCAGAAAGTGGAAGAAGAGATTGAAATAAGTGTAGTCTCTGAAACAGGTATG
AAGATTTCTCATACAACTATGAAGAGGGAATATCCTCTAACTATAACCACTAAGACTTCG
AAGCCATCAAGAGAAGATGGTACAATCATTATGCATTCTGAATTAGAAAATGAATGGAAT
GAGGAGAAGAAGTGGAGTGACAGAGATTCACATTCTTGTTCAAGCAGTTTGAAAAATAGA
CAAAAATGCAAAGGGTGTATGTCTGTTCAAGATCGCATTGTTCTACAAAGTGGAGCAACG
ACTGAACAGAGTTATTCATATAATGGTGAAGCTAGCACCTATTCTCGGGAAATCGCAGCT
GTCAATGGCAAGCTTGTACACGATACTGCAAACTACGTGAAGTCTTCTTCGGTTTCTGCT
ATGTAA