Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077223
CDS Infomation

pacid=37451558 polypeptide=PGSC0003DMP400052319 locus=PGSC0003DMG400030035 ID=PGSC0003DMT400077223.v4.03 annot-version=v4.03
Sequence

ATGAATTGGCAATGGAAATTCAGTGAGAATAGCTTGTTGTTGGTTATTGTGCTGTTCTTG
TGTTTGGTGCATCAGGAATTGTGTTTCTGTTGGTCTCTCAATGATGAGGGTTTGGCACTG
TTAAGATTCAGGGAGAGAGTGGAGAGTGATCCATTTGGGGCTTTGTTGAATTGGAAAGAT
GGTGATGGAGTGGAAAATCCATGTACTTGGTTAGGAGTTGGGTGCGTTAATGGGAATGTT
GTGTCTCTGGACTTGAAAGATCTCCATCTATGTGGTACCCTAGCTCCTGATCTCGCGCAC
TTGGTTCACTTGAAGTTTATAATTTTACATAACAATTCCTTTACTGGGTTCATACCTGAT
GAGATTGCAAAGCTAAAAGAATTGGAGATTCTGGACCTGGGATCTAATAACTTTAGCCAG
CCGCTGCCTTCCGAGCTTTGCCATAATCCCTCTCTGGAAATAATCTTATCAGACAACAAT
GAGCTGTTTAGCAGCATATTTCCTGGAACCGATAGACTTGAAATGGTCCCAAATGTCCAA
GAAAATAACAACCACGCTACGAGAGCCCAACCTTTGTCACTTCCCAATGGGAGATTGATA
TTAAGGACTACTGAAGCACTTGGAAATGTAGCTGGAAGAAAATTACTAAGAGTATCATCT
TTTTCTGTCCTGAATAACTTCCAGAAGCAATTTCTGCCAGTCTTCCGACTTCTAGACCGT
CGTGAAGTTGCTGTTGAGAACAGCGCACCTTCATCATCACCATCTCCATCACCGAGTCCT
TCTCTTTCCCCGTCTCCTACACCGGCAATTACTGCAGAACCTCATATGGCTCATTCACCA
AGATCCTCTCCTTCTCCATCTTCACTTCCCAGTCCTGCAGAGAACAGCAGTAGAGTTGAA
GATGCCAGACGAAGTAATCATCGAGTTTTAATATTGTCTGCAGCTATAGGAGGTTCCGTT
CTACTAATAATATTGATAACTGGCACTATCGTCTTTCGAAGCAACAAAATGGCTGTTGTA
AAGCCTTGGGCCACTGGATTGAGTGGACAGTTGCAGAGAGCATTCGTTACTGGTGTGCCA
AAGCTTAAGAGATCAGAACTTGAGTCAGCCTGTGAAGATTTCAGCAATGTGATCGGTTCC
TCATCTGTTTGCACATTATATAAGGGCACATTATCCAGTGGAGTTGAGATAGCTGTGATA
TCTCGTACAGTGGCATCTACTAAGGATTGGTCAAAAGATATGGAAGCCCATTATAGGAAA
AAGATCGATACATTGTCAAAGGTCAATCACAAGAACTTTGTCAGCCTCCTTGGGTTTTGT
GAAGAAGAGGATCCATTTACCAGAATGATGGTTTTTGAGTATGCTCCTAATGGGACCCTC
TTTGAACATCTTCACATAAGGGAAGCTGAACACTTGGACTGGGGGATGCGAATGAGGATA
ACAATGGGAATGGCATACTGCCTTGAGCACATGCACAATTTGTCGCCATCGTTACCTCAT
AAAAACTTGACCTCCTCTGCCGTATACCTCACAGAAGACTCTGCAGCCAAAATATCGGAT
TTTGGGTTCTGGAATGAGACAGATGCAGCTGAAATGGTGTCGAGTCCAGAAAGTAATGTT
TACAGCTTTGGTGTCATTCTGTTTGAGATGATGACTGGTAGGCTCCCTTACTCAGCAAAC
AGTAGCTCTCTTGACGACTGGGCATCAGACTATCTTAGGGGAGGAGAATCCCTGAGAGAA
ATGGTTGATCCAACTTTAAATTCTTTCCAAGTAGAGCAGCTAGAGAGAATAGCTGTTGTG
ATTAAAATGTGTGTACATCCCGAGCCAAGACGAAGACCGACAATGAGAGAGGTTTCTTCC
AGATTGAGAGAGATAACAGATATTGGACCAGATGGGGCAACCCCAAGACTCTCTCCTCTA
TGGTGGGCTGAGCTTGAGATTATATCAACTGAGGCTTGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052319
PEP Infomation

pacid=37451558 transcript=PGSC0003DMT400077223 locus=PGSC0003DMG400030035 ID=PGSC0003DMT400077223.v4.03 annot-version=v4.03
Sequence

MNWQWKFSENSLLLVIVLFLCLVHQELCFCWSLNDEGLALLRFRERVESDPFGALLNWKD
GDGVENPCTWLGVGCVNGNVVSLDLKDLHLCGTLAPDLAHLVHLKFIILHNNSFTGFIPD
EIAKLKELEILDLGSNNFSQPLPSELCHNPSLEIILSDNNELFSSIFPGTDRLEMVPNVQ
ENNNHATRAQPLSLPNGRLILRTTEALGNVAGRKLLRVSSFSVLNNFQKQFLPVFRLLDR
REVAVENSAPSSSPSPSPSPSLSPSPTPAITAEPHMAHSPRSSPSPSSLPSPAENSSRVE
DARRSNHRVLILSAAIGGSVLLIILITGTIVFRSNKMAVVKPWATGLSGQLQRAFVTGVP
KLKRSELESACEDFSNVIGSSSVCTLYKGTLSSGVEIAVISRTVASTKDWSKDMEAHYRK
KIDTLSKVNHKNFVSLLGFCEEEDPFTRMMVFEYAPNGTLFEHLHIREAEHLDWGMRMRI
TMGMAYCLEHMHNLSPSLPHKNLTSSAVYLTEDSAAKISDFGFWNETDAAEMVSSPESNV
YSFGVILFEMMTGRLPYSANSSSLDDWASDYLRGGESLREMVDPTLNSFQVEQLERIAVV
IKMCVHPEPRRRPTMREVSSRLREITDIGPDGATPRLSPLWWAELEIISTEAC*

Transcript Sequence

Transcript ID

PGSC0003DMT400077223
Transcript Infomation

pacid=37451558 locus=PGSC0003DMG400030035 ID=PGSC0003DMT400077223.v4.03 annot-version=v4.03
Sequence

ATGAATTGGCAATGGAAATTCAGTGAGAATAGCTTGTTGTTGGTTATTGTGCTGTTCTTG
TGTTTGGTGCATCAGGAATTGTGTTTCTGTTGGTCTCTCAATGATGAGGGTTTGGCACTG
TTAAGATTCAGGGAGAGAGTGGAGAGTGATCCATTTGGGGCTTTGTTGAATTGGAAAGAT
GGTGATGGAGTGGAAAATCCATGTACTTGGTTAGGAGTTGGGTGCGTTAATGGGAATGTT
GTGTCTCTGGACTTGAAAGATCTCCATCTATGTGGTACCCTAGCTCCTGATCTCGCGCAC
TTGGTTCACTTGAAGTTTATAATTTTACATAACAATTCCTTTACTGGGTTCATACCTGAT
GAGATTGCAAAGCTAAAAGAATTGGAGATTCTGGACCTGGGATCTAATAACTTTAGCCAG
CCGCTGCCTTCCGAGCTTTGCCATAATCCCTCTCTGGAAATAATCTTATCAGACAACAAT
GAGCTGTTTAGCAGCATATTTCCTGGAACCGATAGACTTGAAATGGTCCCAAATGTCCAA
GAAAATAACAACCACGCTACGAGAGCCCAACCTTTGTCACTTCCCAATGGGAGATTGATA
TTAAGGACTACTGAAGCACTTGGAAATGTAGCTGGAAGAAAATTACTAAGAGTATCATCT
TTTTCTGTCCTGAATAACTTCCAGAAGCAATTTCTGCCAGTCTTCCGACTTCTAGACCGT
CGTGAAGTTGCTGTTGAGAACAGCGCACCTTCATCATCACCATCTCCATCACCGAGTCCT
TCTCTTTCCCCGTCTCCTACACCGGCAATTACTGCAGAACCTCATATGGCTCATTCACCA
AGATCCTCTCCTTCTCCATCTTCACTTCCCAGTCCTGCAGAGAACAGCAGTAGAGTTGAA
GATGCCAGACGAAGTAATCATCGAGTTTTAATATTGTCTGCAGCTATAGGAGGTTCCGTT
CTACTAATAATATTGATAACTGGCACTATCGTCTTTCGAAGCAACAAAATGGCTGTTGTA
AAGCCTTGGGCCACTGGATTGAGTGGACAGTTGCAGAGAGCATTCGTTACTGGTGTGCCA
AAGCTTAAGAGATCAGAACTTGAGTCAGCCTGTGAAGATTTCAGCAATGTGATCGGTTCC
TCATCTGTTTGCACATTATATAAGGGCACATTATCCAGTGGAGTTGAGATAGCTGTGATA
TCTCGTACAGTGGCATCTACTAAGGATTGGTCAAAAGATATGGAAGCCCATTATAGGAAA
AAGATCGATACATTGTCAAAGGTCAATCACAAGAACTTTGTCAGCCTCCTTGGGTTTTGT
GAAGAAGAGGATCCATTTACCAGAATGATGGTTTTTGAGTATGCTCCTAATGGGACCCTC
TTTGAACATCTTCACATAAGGGAAGCTGAACACTTGGACTGGGGGATGCGAATGAGGATA
ACAATGGGAATGGCATACTGCCTTGAGCACATGCACAATTTGTCGCCATCGTTACCTCAT
AAAAACTTGACCTCCTCTGCCGTATACCTCACAGAAGACTCTGCAGCCAAAATATCGGAT
TTTGGGTTCTGGAATGAGACAGATGCAGCTGAAATGGTGTCGAGTCCAGAAAGTAATGTT
TACAGCTTTGGTGTCATTCTGTTTGAGATGATGACTGGTAGGCTCCCTTACTCAGCAAAC
AGTAGCTCTCTTGACGACTGGGCATCAGACTATCTTAGGGGAGGAGAATCCCTGAGAGAA
ATGGTTGATCCAACTTTAAATTCTTTCCAAGTAGAGCAGCTAGAGAGAATAGCTGTTGTG
ATTAAAATGTGTGTACATCCCGAGCCAAGACGAAGACCGACAATGAGAGAGGTTTCTTCC
AGATTGAGAGAGATAACAGATATTGGACCAGATGGGGCAACCCCAAGACTCTCTCCTCTA
TGGTGGGCTGAGCTTGAGATTATATCAACTGAGGCTTGTTAA