Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077205
CDS Infomation

pacid=37450773 polypeptide=PGSC0003DMP400052305 locus=PGSC0003DMG400030026 ID=PGSC0003DMT400077205.v4.03 annot-version=v4.03
Sequence

ATGAATGAACTCATAGTCTCCTCAGTATATCCCCCAACTGGGAATTTGCTGGAAGCACTT
ATTCACATCTCTAACGAAGTATTTTCAATGGAAAAGCTTCCATTTGTACAGATGAAAAAC
ATTTCAAGTATGGTAAGAAGGATCAAGATTCTTACTTCATTGTTTGAAGAAATTCAAGAA
ACATCATCCGCTGCACGACTTCCACCATCTTCCATCCTCTGCTTGGCTGAACTTTCATGT
GTCATACAAAAGGTAAAGCTGCTTATTGAAATTTGCAAAGAGGGAAGCTCTTTGTGGAAC
CTCATGCAAACAGAATTGATTTCCAACCAATTTCATGCACTCATCAAGGAGATGGACAAC
GCACTTGATATTTTACCTCTGAGGTTGCTTAATGTGACTGTTGACACCAAGGAGCAAGTG
GAGCTACTTCACAAGCAGGCGAAAAGGGCTGATTTGTTCATTGATCCCCGAGACATTCAC
AAAAGGGAAGAGATTTTGCAGTTGATGGCTACTAACTGTGATAGGAAAAGCAAGAACAAA
GGCCTCATTGACTTTGAGAGAGTGAAACAGAGTTTCAATAGCATTGGTTTGACAACCTCA
TTGGACTATGAGGAAGAGATCTCAAAATTAGAGACACAAGCTGAGAAACAGGCAGGCACG
GGTGGTCTTATCGCTGTCTCGAATATCAACAGCCTAATATCCTTGATCTCCTTGTCAAAA
ACTGCAATTTTGGAAGAAGAACACCTTATGAATAAGCAAAATTTGAAGCAGACCGTATCG
ATAAATGTTCTTCCTGATCAATCCTCGTCGTGTTATTCACTGGTTTCCGACATCCCTGAT
GAATTACGCTGCCCAATTTCACTTGACTTGATAAGGGATCCCGTGATAGTAGCATCAGGG
CATACTTATGATCGAAATTCAATCGCTCAGTGGATAAATTCAGGGCACCACACATGTCCA
AAAAGTGGGCAGAGGCTCATACATATGGCTCTAATTCCCAACTATGCACTGAAAAGTCTA
ATACAACAATGGTGCGAAGACAACAACATCCCAATAACAGAATTCAAATCAACTCCTTCA
GTTTCAGAGAGTAGCAGTAGTAAGATTAAGAAATATGACAAGGCGGTTGACTACATTTCT
GCTACTAAAGCTTCCACGGATGCTGTCAAAATGACAGCAGAGTTTTTAGTTGGGAAACTG
GCAACAGGGTCTCCAGATATACAGAGACAGGCAGCATATGAGCTAAGATTGCTCGCGAAA
TCTGGCATGGACAATCGCAGGATCATAGCTGAGTCTGGAGCTATTCCATTTCTGATGACT
CTGCTAGGTTCCCGCGATCCAAGAATCCAGGAGAATGCAGTCACAGCCTTACTCAACCTC
TCAATACATGAGAATAACAAGATCCTGATTATGTCTGCTGGTGCTATCGACAGCTTAATT
GGAGTTCTCCAATCTGGGAAAACAATGGAAGCAAGAGGAAATGCAGCAGCAGCAATCTTC
AGCTTGTCTGTAATAGACGAATACAAGGTAATCATTGGGGCACGTACCAAAGCCATTCCA
GCTTTGGTTGGACTTCTAAAAGACGGAACTACAGCAGGGAAAAGGGATGCCGCTATAGCA
CTCTTTAATCTTGCGGTCTATGATGCCAATAGGCAAAGTATAGTGCTTGCAGGAGCTGTT
CCCCTACTCATTGATCTTCTCATGGACGACAAGGCTGGTATAACTGATGATTCCTTGGCG
GTTCTTGCCCTCGTCTTGGGCTGCAACGAAGGGCTACAAGCATTAAGAAAGAGTAGGATC
TTGGTGCCTCTTCTTGTTGATCTATTGAGATTTGGATCTTCAAAAGGGAAGGATCATTCG
ATAACACTTCTGCTAGGACTCTGCAAGGATAGTGGAGAGGAGATAGCGGGAAGATTATTG
ATGAATCCAAGAAGTATTCCTTCTCTCCAGAGCTTGGCTGCTGATGGCTCTCTGAGAGCT
CGAAGAAAGGCTGATGCTCTCCTAAGACTACTTAATAGATGCTGCTTTCAATCTCAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052305
PEP Infomation

pacid=37450773 transcript=PGSC0003DMT400077205 locus=PGSC0003DMG400030026 ID=PGSC0003DMT400077205.v4.03 annot-version=v4.03
Sequence

MNELIVSSVYPPTGNLLEALIHISNEVFSMEKLPFVQMKNISSMVRRIKILTSLFEEIQE
TSSAARLPPSSILCLAELSCVIQKVKLLIEICKEGSSLWNLMQTELISNQFHALIKEMDN
ALDILPLRLLNVTVDTKEQVELLHKQAKRADLFIDPRDIHKREEILQLMATNCDRKSKNK
GLIDFERVKQSFNSIGLTTSLDYEEEISKLETQAEKQAGTGGLIAVSNINSLISLISLSK
TAILEEEHLMNKQNLKQTVSINVLPDQSSSCYSLVSDIPDELRCPISLDLIRDPVIVASG
HTYDRNSIAQWINSGHHTCPKSGQRLIHMALIPNYALKSLIQQWCEDNNIPITEFKSTPS
VSESSSSKIKKYDKAVDYISATKASTDAVKMTAEFLVGKLATGSPDIQRQAAYELRLLAK
SGMDNRRIIAESGAIPFLMTLLGSRDPRIQENAVTALLNLSIHENNKILIMSAGAIDSLI
GVLQSGKTMEARGNAAAAIFSLSVIDEYKVIIGARTKAIPALVGLLKDGTTAGKRDAAIA
LFNLAVYDANRQSIVLAGAVPLLIDLLMDDKAGITDDSLAVLALVLGCNEGLQALRKSRI
LVPLLVDLLRFGSSKGKDHSITLLLGLCKDSGEEIAGRLLMNPRSIPSLQSLAADGSLRA
RRKADALLRLLNRCCFQSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400077205
Transcript Infomation

pacid=37450773 locus=PGSC0003DMG400030026 ID=PGSC0003DMT400077205.v4.03 annot-version=v4.03
Sequence

ATGAATGAACTCATAGTCTCCTCAGTATATCCCCCAACTGGGAATTTGCTGGAAGCACTT
ATTCACATCTCTAACGAAGTATTTTCAATGGAAAAGCTTCCATTTGTACAGATGAAAAAC
ATTTCAAGTATGGTAAGAAGGATCAAGATTCTTACTTCATTGTTTGAAGAAATTCAAGAA
ACATCATCCGCTGCACGACTTCCACCATCTTCCATCCTCTGCTTGGCTGAACTTTCATGT
GTCATACAAAAGGTAAAGCTGCTTATTGAAATTTGCAAAGAGGGAAGCTCTTTGTGGAAC
CTCATGCAAACAGAATTGATTTCCAACCAATTTCATGCACTCATCAAGGAGATGGACAAC
GCACTTGATATTTTACCTCTGAGGTTGCTTAATGTGACTGTTGACACCAAGGAGCAAGTG
GAGCTACTTCACAAGCAGGCGAAAAGGGCTGATTTGTTCATTGATCCCCGAGACATTCAC
AAAAGGGAAGAGATTTTGCAGTTGATGGCTACTAACTGTGATAGGAAAAGCAAGAACAAA
GGCCTCATTGACTTTGAGAGAGTGAAACAGAGTTTCAATAGCATTGGTTTGACAACCTCA
TTGGACTATGAGGAAGAGATCTCAAAATTAGAGACACAAGCTGAGAAACAGGCAGGCACG
GGTGGTCTTATCGCTGTCTCGAATATCAACAGCCTAATATCCTTGATCTCCTTGTCAAAA
ACTGCAATTTTGGAAGAAGAACACCTTATGAATAAGCAAAATTTGAAGCAGACCGTATCG
ATAAATGTTCTTCCTGATCAATCCTCGTCGTGTTATTCACTGGTTTCCGACATCCCTGAT
GAATTACGCTGCCCAATTTCACTTGACTTGATAAGGGATCCCGTGATAGTAGCATCAGGG
CATACTTATGATCGAAATTCAATCGCTCAGTGGATAAATTCAGGGCACCACACATGTCCA
AAAAGTGGGCAGAGGCTCATACATATGGCTCTAATTCCCAACTATGCACTGAAAAGTCTA
ATACAACAATGGTGCGAAGACAACAACATCCCAATAACAGAATTCAAATCAACTCCTTCA
GTTTCAGAGAGTAGCAGTAGTAAGATTAAGAAATATGACAAGGCGGTTGACTACATTTCT
GCTACTAAAGCTTCCACGGATGCTGTCAAAATGACAGCAGAGTTTTTAGTTGGGAAACTG
GCAACAGGGTCTCCAGATATACAGAGACAGGCAGCATATGAGCTAAGATTGCTCGCGAAA
TCTGGCATGGACAATCGCAGGATCATAGCTGAGTCTGGAGCTATTCCATTTCTGATGACT
CTGCTAGGTTCCCGCGATCCAAGAATCCAGGAGAATGCAGTCACAGCCTTACTCAACCTC
TCAATACATGAGAATAACAAGATCCTGATTATGTCTGCTGGTGCTATCGACAGCTTAATT
GGAGTTCTCCAATCTGGGAAAACAATGGAAGCAAGAGGAAATGCAGCAGCAGCAATCTTC
AGCTTGTCTGTAATAGACGAATACAAGGTAATCATTGGGGCACGTACCAAAGCCATTCCA
GCTTTGGTTGGACTTCTAAAAGACGGAACTACAGCAGGGAAAAGGGATGCCGCTATAGCA
CTCTTTAATCTTGCGGTCTATGATGCCAATAGGCAAAGTATAGTGCTTGCAGGAGCTGTT
CCCCTACTCATTGATCTTCTCATGGACGACAAGGCTGGTATAACTGATGATTCCTTGGCG
GTTCTTGCCCTCGTCTTGGGCTGCAACGAAGGGCTACAAGCATTAAGAAAGAGTAGGATC
TTGGTGCCTCTTCTTGTTGATCTATTGAGATTTGGATCTTCAAAAGGGAAGGATCATTCG
ATAACACTTCTGCTAGGACTCTGCAAGGATAGTGGAGAGGAGATAGCGGGAAGATTATTG
ATGAATCCAAGAAGTATTCCTTCTCTCCAGAGCTTGGCTGCTGATGGCTCTCTGAGAGCT
CGAAGAAAGGCTGATGCTCTCCTAAGACTACTTAATAGATGCTGCTTTCAATCTCAGTAA