Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077180
CDS Infomation

pacid=37457754 polypeptide=PGSC0003DMP400052293 locus=PGSC0003DMG400030017 ID=PGSC0003DMT400077180.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATTTGTGGTGGAGAAGAACAGCTTGAGAGTAACATCACCAGACTCAATCAAA
GAGGTGTATGAGTGTGCAATTGGCAACTTTGGGGTACCACAGTATGGAGGAACCATGGTT
GGTAATGTTATGTACCCAAAAACTAATCAAAAATCATGCAAGAATTTCTCAGATTTTGAT
ATCTTCTACAAATCTAAGCCTGGTGGCATGCCTGTTTTCCTTCTTGTTGATAGAGGAGAT
TGCTTTTTCACACTGAAGGCTTGGAATGCTCAGCAAGCTGGAGCAGGTGCTATTCTTGTT
GCTGATGACCGTGTTGAACCTTTAATTACCATGGACACCCCTGAGGAAGAGGATGCAAAG
GCAGATTATTTGCAAGATATAACTATTCCATCGGCTTTAATTAGCAAATCACTTGGGGAT
AGCATTAAGAAGGAACTATCTAAAGGAGAAATGGTTAACATAAACCTCGATTGGAGAGAG
GCTCTTCCACATCCTGACGATCGAGTGGAGTACGAATTTTGGACCAATAGTAATGATGAG
TGTGGCCCCAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAGGGGGCTGCCCAG
ATACTTGAGCAGAAAGGTTATACACAGTTTAGTCCCCATTACATAACTTGGTATTGCCCG
GAAGCGTTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGAAGATACTGT
GCTCCAGACCCTGAGCAGGACTTCAGTAAAGGTTATGATGGAAAGGATGTTGTTTTGCAA
AATTTACGTCAAGCTTGCTTTTTTAAGGTTGCAAATGAAAGTGGAAAACCCTGGTTGTGG
TGGGATTATGTCACTGACTTTGCAATACGGTGTCCAATGAAAGAGAAGAAATACACAAAA
GAATGTGCTGATCAAGTAATCAAGTCACTTGGCTTTGACGTCAAACAGATTGACAATTGT
GTTGGAGATCCTGAAGCAGATACTGACAACCCTGTTCTAAAGGCTGAACAGGACACCCAG
ATAGGTAAGGGCGCTCGTGGAGATGTGACTATCTTGCCAACTCTCGTTATAAACAATAGA
CAGTACAGAGGTAAGCTGGACAAGGGAGCAGTCCTCAAGGCAATTTGTTCAGGTTTTGAG
GAGACAACCGAGCCTGCAATTTGTTTAACTGAAGAAATAGAAACAAATGAATGCTTAGAA
TCAAATGGTGGGTGCTGGCAGGACAAGGCTGCTAACATTACAGCATGCCAGGATACTTTC
CGTGGTAGAGTATGTGAATGCCCAGTAGTTCAGGGAGTAAAATTTGTTGGTGATGGTTAT
ACTCACTGTGAAGCATCTGGAGCATTGCGGTGTGAAATAAACAATGGAGGCTGTTGGAAG
GGAACCCAAAATGGCAGGGCATATTCTGCTTGCATTGACGATCACACAAAGGGCTGCAAA
TGTCCACCAGGATTCAAAGGGGATGGAGTTAACAGTTGTGAGGATATTGATGAATGCAAG
GAGAAGTTGGCTTGCCAGTGTGCTGAGTGCAAATGCAAGAACACTTGGGGTAGTTATGAT
TGCAGTTGCAACGCCAATTTGTTGTACATGCATGAACATGACACGTGTATAAGCAAAGAT
GCCAAGTCAGAGTTCAGCTGGGGCCTTGTTTGGACTATCATCTTGGGTTTGGCTGTTGCA
GGGGTTTCGGCATATGCTGTGTACAAGTATAGAATCCGGAGATACATGGACTCAGAGATT
CGTGCCATCATGGCACAATATATGCCTTTGGATCAAGGAGAGGGGGCAACTAATGTTCCC
CACGGGAACGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052293
PEP Infomation

pacid=37457754 transcript=PGSC0003DMT400077180 locus=PGSC0003DMG400030017 ID=PGSC0003DMT400077180.v4.03 annot-version=v4.03
Sequence

MGRFVVEKNSLRVTSPDSIKEVYECAIGNFGVPQYGGTMVGNVMYPKTNQKSCKNFSDFD
IFYKSKPGGMPVFLLVDRGDCFFTLKAWNAQQAGAGAILVADDRVEPLITMDTPEEEDAK
ADYLQDITIPSALISKSLGDSIKKELSKGEMVNINLDWREALPHPDDRVEYEFWTNSNDE
CGPKCESQREFVKNFKGAAQILEQKGYTQFSPHYITWYCPEAFILSKQCKSQCINHGRYC
APDPEQDFSKGYDGKDVVLQNLRQACFFKVANESGKPWLWWDYVTDFAIRCPMKEKKYTK
ECADQVIKSLGFDVKQIDNCVGDPEADTDNPVLKAEQDTQIGKGARGDVTILPTLVINNR
QYRGKLDKGAVLKAICSGFEETTEPAICLTEEIETNECLESNGGCWQDKAANITACQDTF
RGRVCECPVVQGVKFVGDGYTHCEASGALRCEINNGGCWKGTQNGRAYSACIDDHTKGCK
CPPGFKGDGVNSCEDIDECKEKLACQCAECKCKNTWGSYDCSCNANLLYMHEHDTCISKD
AKSEFSWGLVWTIILGLAVAGVSAYAVYKYRIRRYMDSEIRAIMAQYMPLDQGEGATNVP
HGNV*

Transcript Sequence

Transcript ID

PGSC0003DMT400077180
Transcript Infomation

pacid=37457754 locus=PGSC0003DMG400030017 ID=PGSC0003DMT400077180.v4.03 annot-version=v4.03
Sequence

ATGGGAAGATTTGTGGTGGAGAAGAACAGCTTGAGAGTAACATCACCAGACTCAATCAAA
GAGGTGTATGAGTGTGCAATTGGCAACTTTGGGGTACCACAGTATGGAGGAACCATGGTT
GGTAATGTTATGTACCCAAAAACTAATCAAAAATCATGCAAGAATTTCTCAGATTTTGAT
ATCTTCTACAAATCTAAGCCTGGTGGCATGCCTGTTTTCCTTCTTGTTGATAGAGGAGAT
TGCTTTTTCACACTGAAGGCTTGGAATGCTCAGCAAGCTGGAGCAGGTGCTATTCTTGTT
GCTGATGACCGTGTTGAACCTTTAATTACCATGGACACCCCTGAGGAAGAGGATGCAAAG
GCAGATTATTTGCAAGATATAACTATTCCATCGGCTTTAATTAGCAAATCACTTGGGGAT
AGCATTAAGAAGGAACTATCTAAAGGAGAAATGGTTAACATAAACCTCGATTGGAGAGAG
GCTCTTCCACATCCTGACGATCGAGTGGAGTACGAATTTTGGACCAATAGTAATGATGAG
TGTGGCCCCAAGTGTGAAAGCCAGAGAGAGTTTGTCAAAAACTTCAAGGGGGCTGCCCAG
ATACTTGAGCAGAAAGGTTATACACAGTTTAGTCCCCATTACATAACTTGGTATTGCCCG
GAAGCGTTTATTTTGAGCAAGCAATGCAAGTCTCAGTGCATCAACCATGGAAGATACTGT
GCTCCAGACCCTGAGCAGGACTTCAGTAAAGGTTATGATGGAAAGGATGTTGTTTTGCAA
AATTTACGTCAAGCTTGCTTTTTTAAGGTTGCAAATGAAAGTGGAAAACCCTGGTTGTGG
TGGGATTATGTCACTGACTTTGCAATACGGTGTCCAATGAAAGAGAAGAAATACACAAAA
GAATGTGCTGATCAAGTAATCAAGTCACTTGGCTTTGACGTCAAACAGATTGACAATTGT
GTTGGAGATCCTGAAGCAGATACTGACAACCCTGTTCTAAAGGCTGAACAGGACACCCAG
ATAGGTAAGGGCGCTCGTGGAGATGTGACTATCTTGCCAACTCTCGTTATAAACAATAGA
CAGTACAGAGGTAAGCTGGACAAGGGAGCAGTCCTCAAGGCAATTTGTTCAGGTTTTGAG
GAGACAACCGAGCCTGCAATTTGTTTAACTGAAGAAATAGAAACAAATGAATGCTTAGAA
TCAAATGGTGGGTGCTGGCAGGACAAGGCTGCTAACATTACAGCATGCCAGGATACTTTC
CGTGGTAGAGTATGTGAATGCCCAGTAGTTCAGGGAGTAAAATTTGTTGGTGATGGTTAT
ACTCACTGTGAAGCATCTGGAGCATTGCGGTGTGAAATAAACAATGGAGGCTGTTGGAAG
GGAACCCAAAATGGCAGGGCATATTCTGCTTGCATTGACGATCACACAAAGGGCTGCAAA
TGTCCACCAGGATTCAAAGGGGATGGAGTTAACAGTTGTGAGGATATTGATGAATGCAAG
GAGAAGTTGGCTTGCCAGTGTGCTGAGTGCAAATGCAAGAACACTTGGGGTAGTTATGAT
TGCAGTTGCAACGCCAATTTGTTGTACATGCATGAACATGACACGTGTATAAGCAAAGAT
GCCAAGTCAGAGTTCAGCTGGGGCCTTGTTTGGACTATCATCTTGGGTTTGGCTGTTGCA
GGGGTTTCGGCATATGCTGTGTACAAGTATAGAATCCGGAGATACATGGACTCAGAGATT
CGTGCCATCATGGCACAATATATGCCTTTGGATCAAGGAGAGGGGGCAACTAATGTTCCC
CACGGGAACGTCTAA