Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077141
CDS Infomation

pacid=37438024 polypeptide=PGSC0003DMP400052271 locus=PGSC0003DMG400029999 ID=PGSC0003DMT400077141.v4.03 annot-version=v4.03
Sequence

ATGAAAACATCTTTGAAGAAATTGCGAGGATTGGCTACTCTTAGACATGAAAGGAAAGAA
CGAAGGCATCGCCAACCTTCCGATGAGCTTGCTATGGCTGCTCAGGATATGCAAGAAATG
AAAGATTGCTACGATAGGTTACTTTCTGCAGCAGCTGCAACTGCAAATGGTGCATATGAA
TTTTCTGAATCGTTGCGAGAAATGGGCGATTGTCTTCTTGAGAAAACGGCATTGAATGAT
GACGAAGAAAGCGGTAAGGTGTTACTAATGCTAGGTAAACTGCAGTTTCAGCTTCAGAGA
CTTGTAGATAACTACCGGTCTCATATTATTCAGACTATCTCAGTGCCCTCAGAATCCCTT
ATCAATGAACTGCGCGTAGTTGAGGAAATGAAGATGCAATGTGACGACAAGAGAGAAGTG
TATGAGAAGATGATGCAAAAACACAGAGATAAAGGCAGGATAAAAGGAACTAAAGGAGAA
CATATTTCTTCTCATCAGCTGCAAGTAGCTTATGACGACTATGATGAGGGGGCTAATGTT
TTTGTATTCCGTATGAAGTCCCTCAGGCAAGGACAATCCCGCAACCTTTTAACACAGGCA
TCTCGACACCATGCTGCTCAGTTATCTTTCTTCAAGAAAGCCCTCAAGTCCCTTGAGGAG
ATTGAGCCACATGTCAAACTGGTGACGGATCTGCATCATATTGATTACCACTTCCGTGGG
CTTGAAGAAGATGATGGAGTTAATGCTGGCAATGAGGATGAAAACAGTTCCGTGGATGAC
TCTGATGATGGATCTGAGTCGCTTGATGATGGTGAACTGAGTTTTGACTATGGACAGAAT
GACCAGGTTTATACATCAACCCATTCAATGGAGTTGGATAAGGTGGATGTTGCAGTTCCC
GAAGTTGCTTCGAAGGGTGCATCAAAGGAAAATCTCAGTAAGAGTCATGGTGGGAACAGT
TTTTCCTTCTTTAGGGACGTCAACAGCACTAAATCAGCACCACTTTTGTCTGGGAGGAAA
CCAGATCCTGCTGAGGGTGCCGCACGAATGACTTCGTCACTCTCAAACAAGTTTCAACCA
TATGTTCTACCCACACCAGTGGAGGCGAAGATTCCAGCATCAGTAAAATCGCATAACATA
GACCCTCAAACAAAGCGAACTAGCCAGACTACTAGTGTAGTTCAGAAGTGGCATTCCTCC
CCTTTGGATCAGTTCAAATATGAAAAGCTTGTGGCAGGTGATAAGTTCTCTGGACCTATC
ACCATGAATACACAATCAGTTCCCACAGAGAGCAAAAACAATGCAAGTACTGGTTGGTTG
CCCCCTCCACTGTCAGAAGGCCTCTCATCTGCACAACGTGATTTGTCCAATGCCAAAAAG
GTCAAGAGACAAGCCTTTTCTGGTCCATTGACGGCAAAGCCATGGCCAAAGAAGCCCATT
GTTTCTTCTGGTAGTCCAATTGCCTCATCTGGATACCCTCTGCATTTTTCTCTGCCTTTC
TTGCATACTTCAACGCCTGAACCTTCATCGACCCCTAAATTATCTTCACGTACTTCCCTC
ATGTCATCACCTAAAATAAGTGAGCTACACGAACTACCTAGACCACCAGCTAAAGTAACC
TCTACAAGACCCTTACGTCCGGTTACTCGTTCAGGACCTTTGGTCTCAAAAGTTCAGGAT
TTTTCTCCTACAAATAAAGCGGCAGTATCTTCAGCTGCTTCTACCCTACCAACGCCTCCA
GCTCTTCCTCGTAGTTACTCTATACCATCTCGGGGTCAGATAGAAACATCACTTCATATT
TCTAAGCCACTGGAAGATATGGCTTCATCACCTCCTTTAACGCCAATAGCCTTGGTGAAA
GACCACCATACTTCCCCTGCTTCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052271
PEP Infomation

pacid=37438024 transcript=PGSC0003DMT400077141 locus=PGSC0003DMG400029999 ID=PGSC0003DMT400077141.v4.03 annot-version=v4.03
Sequence

MKTSLKKLRGLATLRHERKERRHRQPSDELAMAAQDMQEMKDCYDRLLSAAAATANGAYE
FSESLREMGDCLLEKTALNDDEESGKVLLMLGKLQFQLQRLVDNYRSHIIQTISVPSESL
INELRVVEEMKMQCDDKREVYEKMMQKHRDKGRIKGTKGEHISSHQLQVAYDDYDEGANV
FVFRMKSLRQGQSRNLLTQASRHHAAQLSFFKKALKSLEEIEPHVKLVTDLHHIDYHFRG
LEEDDGVNAGNEDENSSVDDSDDGSESLDDGELSFDYGQNDQVYTSTHSMELDKVDVAVP
EVASKGASKENLSKSHGGNSFSFFRDVNSTKSAPLLSGRKPDPAEGAARMTSSLSNKFQP
YVLPTPVEAKIPASVKSHNIDPQTKRTSQTTSVVQKWHSSPLDQFKYEKLVAGDKFSGPI
TMNTQSVPTESKNNASTGWLPPPLSEGLSSAQRDLSNAKKVKRQAFSGPLTAKPWPKKPI
VSSGSPIASSGYPLHFSLPFLHTSTPEPSSTPKLSSRTSLMSSPKISELHELPRPPAKVT
STRPLRPVTRSGPLVSKVQDFSPTNKAAVSSAASTLPTPPALPRSYSIPSRGQIETSLHI
SKPLEDMASSPPLTPIALVKDHHTSPAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400077141
Transcript Infomation

pacid=37438024 locus=PGSC0003DMG400029999 ID=PGSC0003DMT400077141.v4.03 annot-version=v4.03
Sequence

ATGAAAACATCTTTGAAGAAATTGCGAGGATTGGCTACTCTTAGACATGAAAGGAAAGAA
CGAAGGCATCGCCAACCTTCCGATGAGCTTGCTATGGCTGCTCAGGATATGCAAGAAATG
AAAGATTGCTACGATAGGTTACTTTCTGCAGCAGCTGCAACTGCAAATGGTGCATATGAA
TTTTCTGAATCGTTGCGAGAAATGGGCGATTGTCTTCTTGAGAAAACGGCATTGAATGAT
GACGAAGAAAGCGGTAAGGTGTTACTAATGCTAGGTAAACTGCAGTTTCAGCTTCAGAGA
CTTGTAGATAACTACCGGTCTCATATTATTCAGACTATCTCAGTGCCCTCAGAATCCCTT
ATCAATGAACTGCGCGTAGTTGAGGAAATGAAGATGCAATGTGACGACAAGAGAGAAGTG
TATGAGAAGATGATGCAAAAACACAGAGATAAAGGCAGGATAAAAGGAACTAAAGGAGAA
CATATTTCTTCTCATCAGCTGCAAGTAGCTTATGACGACTATGATGAGGGGGCTAATGTT
TTTGTATTCCGTATGAAGTCCCTCAGGCAAGGACAATCCCGCAACCTTTTAACACAGGCA
TCTCGACACCATGCTGCTCAGTTATCTTTCTTCAAGAAAGCCCTCAAGTCCCTTGAGGAG
ATTGAGCCACATGTCAAACTGGTGACGGATCTGCATCATATTGATTACCACTTCCGTGGG
CTTGAAGAAGATGATGGAGTTAATGCTGGCAATGAGGATGAAAACAGTTCCGTGGATGAC
TCTGATGATGGATCTGAGTCGCTTGATGATGGTGAACTGAGTTTTGACTATGGACAGAAT
GACCAGGTTTATACATCAACCCATTCAATGGAGTTGGATAAGGTGGATGTTGCAGTTCCC
GAAGTTGCTTCGAAGGGTGCATCAAAGGAAAATCTCAGTAAGAGTCATGGTGGGAACAGT
TTTTCCTTCTTTAGGGACGTCAACAGCACTAAATCAGCACCACTTTTGTCTGGGAGGAAA
CCAGATCCTGCTGAGGGTGCCGCACGAATGACTTCGTCACTCTCAAACAAGTTTCAACCA
TATGTTCTACCCACACCAGTGGAGGCGAAGATTCCAGCATCAGTAAAATCGCATAACATA
GACCCTCAAACAAAGCGAACTAGCCAGACTACTAGTGTAGTTCAGAAGTGGCATTCCTCC
CCTTTGGATCAGTTCAAATATGAAAAGCTTGTGGCAGGTGATAAGTTCTCTGGACCTATC
ACCATGAATACACAATCAGTTCCCACAGAGAGCAAAAACAATGCAAGTACTGGTTGGTTG
CCCCCTCCACTGTCAGAAGGCCTCTCATCTGCACAACGTGATTTGTCCAATGCCAAAAAG
GTCAAGAGACAAGCCTTTTCTGGTCCATTGACGGCAAAGCCATGGCCAAAGAAGCCCATT
GTTTCTTCTGGTAGTCCAATTGCCTCATCTGGATACCCTCTGCATTTTTCTCTGCCTTTC
TTGCATACTTCAACGCCTGAACCTTCATCGACCCCTAAATTATCTTCACGTACTTCCCTC
ATGTCATCACCTAAAATAAGTGAGCTACACGAACTACCTAGACCACCAGCTAAAGTAACC
TCTACAAGACCCTTACGTCCGGTTACTCGTTCAGGACCTTTGGTCTCAAAAGTTCAGGAT
TTTTCTCCTACAAATAAAGCGGCAGTATCTTCAGCTGCTTCTACCCTACCAACGCCTCCA
GCTCTTCCTCGTAGTTACTCTATACCATCTCGGGGTCAGATAGAAACATCACTTCATATT
TCTAAGCCACTGGAAGATATGGCTTCATCACCTCCTTTAACGCCAATAGCCTTGGTGAAA
GACCACCATACTTCCCCTGCTTCGTAG